Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:52:27 (1551764): wrapper (7.7.26015): starting
05:52:27 (1551764): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 05:52:27] Arguments: --nthreads 4
[2026-01-27 05:52:27] Threads: 4
[2026-01-27 05:52:27] Checking for CVMFS
[2026-01-27 05:52:27] No cvmfs_config command found, will try listing directly
[2026-01-27 05:52:27] CVMFS is ok
[2026-01-27 05:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 05:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 05:52:27] Further information can be found at the LHC@home message board.
[2026-01-27 05:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 05:52:27] Checking for apptainer binary...
[2026-01-27 05:52:27] which: no apptainer in ((null))
[2026-01-27 05:52:27] apptainer is not installed, using version from CVMFS
[2026-01-27 05:52:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 05:52:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-01-27 05:52:28] apptainer works
[2026-01-27 05:52:28] Set ATHENA_PROC_NUMBER=4
[2026-01-27 05:52:28] Set ATHENA_CORE_NUMBER=4
[2026-01-27 05:52:28] Starting ATLAS job with PandaID=6983466610
[2026-01-27 05:52:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:43:46]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:43:46] 2026-01-27 12:30:36,055 | INFO     | maximum number of monitored processes: 6
[2026-01-27 13:43:46] 2026-01-27 12:30:37,867 | INFO     | time since job start (27472s) is within the limit (349056.0s)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,874 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,874 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6983466610/jobReport.json
[2026-01-27 13:43:46] 2026-01-27 12:30:37,877 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | INFO     | this job has now completed (state=finished)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | INFO     | log transfer has been attempted: DONE
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | INFO     | job 6983466610 has finished - writing final server update
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1232756/.job.ad'
[2026-01-27 13:43:46] 2026-01-27 12:30:37,878 | INFO     | total number of processed events: 400 (read)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,890 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6983466610/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,891 | INFO     | extracted standard info from prmon json
[2026-01-27 13:43:46] 2026-01-27 12:30:37,891 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:43:46] 2026-01-27 12:30:37,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:43:46] 2026-01-27 12:30:37,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:43:46] 2026-01-27 12:30:37,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:43:46] 2026-01-27 12:30:37,899 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:43:46] 2026-01-27 12:30:37,900 | INFO     | sum of square deviations: 28256204212.5
[2026-01-27 13:43:46] 2026-01-27 12:30:37,905 | INFO     | sum of deviations: -13185333335.500006
[2026-01-27 13:43:46] 2026-01-27 12:30:37,905 | INFO     | mean x: 1769503281.5
[2026-01-27 13:43:46] 2026-01-27 12:30:37,905 | INFO     | mean y: 2357779.446666667
[2026-01-27 13:43:46] 2026-01-27 12:30:37,905 | INFO     | intersect: 828069910.8205333
[2026-01-27 13:43:46] 2026-01-27 12:30:37,906 | INFO     | chi2: 1.5041091385527916
[2026-01-27 13:43:46] 2026-01-27 12:30:37,906 | INFO     | sum of square deviations: 27324754190.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,911 | INFO     | sum of deviations: -12832574880.000017
[2026-01-27 13:43:46] 2026-01-27 12:30:37,911 | INFO     | mean x: 1769503129.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,911 | INFO     | mean y: 2357837.206741573
[2026-01-27 13:43:46] 2026-01-27 12:30:37,911 | INFO     | intersect: 833372866.4872969
[2026-01-27 13:43:46] 2026-01-27 12:30:37,912 | INFO     | chi2: 1.504074084928257
[2026-01-27 13:43:46] 2026-01-27 12:30:37,912 | INFO     | current chi2=1.504074084928257 (change=0.0023305240049485607 %)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,912 | INFO     | right removable region: 444
[2026-01-27 13:43:46] 2026-01-27 12:30:37,913 | INFO     | sum of square deviations: 27324754190.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,917 | INFO     | sum of deviations: -57661191657.00001
[2026-01-27 13:43:46] 2026-01-27 12:30:37,917 | INFO     | mean x: 1769503434.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,917 | INFO     | mean y: 2365001.1393258427
[2026-01-27 13:43:46] 2026-01-27 12:30:37,918 | INFO     | intersect: 3736403226.556704
[2026-01-27 13:43:46] 2026-01-27 12:30:37,918 | INFO     | chi2: 0.3266578738586096
[2026-01-27 13:43:46] 2026-01-27 12:30:37,918 | INFO     | current chi2=0.3266578738586096 (change=78.28230242833908 %)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,919 | INFO     | sum of square deviations: 26414002230.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,924 | INFO     | sum of deviations: -37463976671.99999
[2026-01-27 13:43:46] 2026-01-27 12:30:37,924 | INFO     | mean x: 1769503586.5
[2026-01-27 13:43:46] 2026-01-27 12:30:37,924 | INFO     | mean y: 2361614.55
[2026-01-27 13:43:46] 2026-01-27 12:30:37,924 | INFO     | intersect: 2512115362.142393
[2026-01-27 13:43:46] 2026-01-27 12:30:37,925 | INFO     | chi2: 0.25813702837419167
[2026-01-27 13:43:46] 2026-01-27 12:30:37,925 | INFO     | current chi2=0.25813702837419167 (change=20.976333640767056 %)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,925 | INFO     | left removable region: 20
[2026-01-27 13:43:46] 2026-01-27 12:30:37,925 | INFO     | sum of square deviations: 23635978050.0
[2026-01-27 13:43:46] 2026-01-27 12:30:37,930 | INFO     | sum of deviations: 13775153437.500006
[2026-01-27 13:43:46] 2026-01-27 12:30:37,930 | INFO     | mean x: 1769503708.5
[2026-01-27 13:43:46] 2026-01-27 12:30:37,930 | INFO     | mean y: 2352734.2146226414
[2026-01-27 13:43:46] 2026-01-27 12:30:37,930 | INFO     | intersect: -1028921920.0962355
[2026-01-27 13:43:46] 2026-01-27 12:30:37,931 | INFO     | chi2: 0.0025384668220669987
[2026-01-27 13:43:46] 2026-01-27 12:30:37,931 | INFO     | current memory leak: 0.58 B/s (using 424 data points, chi2=0.00)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | could have reported an average CPU frequency of 2577 MHz (19 samples)
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | ..............................
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . Timing measurements:
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . get job = 0 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . initial setup = 5 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . payload setup = 6 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . stage-in = 0 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . payload execution = 27443 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . stage-out = 1 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,932 | INFO     | . log creation = 0 s
[2026-01-27 13:43:46] 2026-01-27 12:30:37,933 | INFO     | ..............................
[2026-01-27 13:43:46] 2026-01-27 12:30:38,026 | INFO     | 
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | job summary report
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | --------------------------------------------------
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | PanDA job id: 6983466610
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | task id: 48329874
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | errors: (none)
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | pilot state: finished 
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | transexitcode: 0
[2026-01-27 13:43:46] 2026-01-27 12:30:38,027 | INFO     | exeerrorcode: 0
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | exeerrordiag: 
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | exitcode: 0
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | exitmsg: OK
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | cpuconsumptiontime: 102545 s
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | nevents: 400
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | neventsw: 0
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | pid: 1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | pgrp: 1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | corecount: 4
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | event service: False
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | sizes: {0: 2283268, 1: 2284397, 12: 2284397, 27453: 2321585, 27454: 2321584, 27456: 2330660, 27458: 2330844, 27461: 2331038}
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | --------------------------------------------------
[2026-01-27 13:43:46] 2026-01-27 12:30:38,028 | INFO     | 
[2026-01-27 13:43:46] 2026-01-27 12:30:38,029 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-27 13:43:46] 2026-01-27 12:30:38,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,051 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:43:46] 2026-01-27 12:30:38,052 | INFO     | job 6983466610 has completed (purged errors)
[2026-01-27 13:43:46] 2026-01-27 12:30:38,052 | INFO     | overall cleanup function is called
[2026-01-27 13:43:46] 2026-01-27 12:30:39,060 | INFO     | --- collectZombieJob: --- 10, [1560641]
[2026-01-27 13:43:46] 2026-01-27 12:30:39,060 | INFO     | zombie collector waiting for pid 1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:39,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:43:46] 2026-01-27 12:30:39,060 | INFO     | collected zombie processes
[2026-01-27 13:43:46] 2026-01-27 12:30:39,060 | INFO     | will attempt to kill all subprocesses of pid=1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:39,467 | INFO     | process IDs to be killed: [1560641] (in reverse order)
[2026-01-27 13:43:46] 2026-01-27 12:30:39,586 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:43:46] 2026-01-27 12:30:39,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:43:46] 2026-01-27 12:30:39,600 | INFO     | did not find any defunct processes belonging to 1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:39,613 | INFO     | did not find any defunct processes belonging to 1560641
[2026-01-27 13:43:46] 2026-01-27 12:30:39,613 | INFO     | ready for new job
[2026-01-27 13:43:46] 2026-01-27 12:30:39,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:43:46] 2026-01-27 12:30:39,617 | INFO     | **************************************
[2026-01-27 13:43:46] 2026-01-27 12:30:39,617 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:43:46] 2026-01-27 12:30:39,617 | INFO     | **************************************
[2026-01-27 13:43:46] 2026-01-27 12:30:39,617 | INFO     | 
[2026-01-27 13:43:46] 2026-01-27 12:30:39,621 | INFO     | architecture information:
[2026-01-27 13:43:46] 2026-01-27 12:30:39,622 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:43:46] 2026-01-27 12:30:39,639 | INFO     | cat /etc/os-release:
[2026-01-27 13:43:46] NAME="CentOS Linux"
[2026-01-27 13:43:46] VERSION="7 (Core)"
[2026-01-27 13:43:46] ID="centos"
[2026-01-27 13:43:46] ID_LIKE="rhel fedora"
[2026-01-27 13:43:46] VERSION_ID="7"
[2026-01-27 13:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:43:46] ANSI_COLOR="0;31"
[2026-01-27 13:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:43:46] HOME_URL="https://www.centos.org/"
[2026-01-27 13:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:43:46] 
[2026-01-27 13:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:43:46] 
[2026-01-27 13:43:46] 2026-01-27 12:30:39,639 | INFO     | **************************************
[2026-01-27 13:43:46] 2026-01-27 12:30:40,142 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-27 13:43:46] 2026-01-27 12:30:40,163 | INFO     | sufficient remaining disk space (669054402560 B)
[2026-01-27 13:43:46] 2026-01-27 12:30:40,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:43:46] 2026-01-27 12:30:40,164 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:43:46] 2026-01-27 12:30:40,164 | INFO     | update_server=False
[2026-01-27 13:43:46] 2026-01-27 12:30:40,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:43:46] 2026-01-27 12:30:40,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:43:46] 2026-01-27 12:30:40,164 | INFO     | aborting loop
[2026-01-27 13:43:46] 2026-01-27 12:30:40,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:43:46] 2026-01-27 12:30:40,801 | INFO     | all data control threads have been joined
[2026-01-27 13:43:46] 2026-01-27 12:30:41,169 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,170 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:43:46] 2026-01-27 12:30:41,270 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,464 | INFO     | all payload control threads have been joined
[2026-01-27 13:43:46] 2026-01-27 12:30:41,466 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,530 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,621 | INFO     | all job control threads have been joined
[2026-01-27 13:43:46] 2026-01-27 12:30:41,806 | INFO     | [data] control thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:41,987 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,006 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,052 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,407 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,469 | INFO     | [payload] control thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,618 | INFO     | [job] validate thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,626 | INFO     | [job] control thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:42,644 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:43,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:43:46] 2026-01-27 12:30:44,037 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:30:45,238 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:43:46] 2026-01-27 12:31:11,452 | INFO     | PID=1555853 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 13:43:46] 2026-01-27 12:31:11,454 | INFO     | .. there are 5 such processes running
[2026-01-27 13:43:46] 2026-01-27 12:31:11,454 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:43:46] 2026-01-27 12:31:11,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:43:46] 2026-01-27 12:31:11,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:43:46] 2026-01-27 12:31:30,830 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:43:46] 2026-01-27 12:31:31,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22976558352192)>', '<ExcThread(monitor, started 22976248383232)>']
[2026-01-27 13:43:46] 2026-01-27 12:31:32,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:43:46] 2026-01-27 12:31:32,553 | INFO     | [monitor] control thread has ended
[2026-01-27 13:43:46] 2026-01-27 12:31:36,830 | INFO     | all workflow threads have been joined
[2026-01-27 13:43:46] 2026-01-27 12:31:36,830 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:43:46] 2026-01-27 12:31:36,830 | INFO     | traces error code: 0
[2026-01-27 13:43:46] 2026-01-27 12:31:36,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:43:46] 2026-01-27 12:31:36,974 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:43:46] 2026-01-27 12:31:36,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:43:46] 2026-01-27 12:31:36,980 [wrapper] pilotpid: 1555853
[2026-01-27 13:43:46] 2026-01-27 12:31:36,983 [wrapper] Pilot exit status: 0
[2026-01-27 13:43:46] 2026-01-27 12:31:36,994 [wrapper] pandaids: 6983466610
[2026-01-27 13:43:46] 2026-01-27 12:31:37,071 [wrapper] cleanup supervisor_pilot 1866242 1555854
[2026-01-27 13:43:46] 2026-01-27 12:31:37,074 [wrapper] Test setup, not cleaning
[2026-01-27 13:43:46] 2026-01-27 12:31:37,076 [wrapper] apfmon messages muted
[2026-01-27 13:43:46] 2026-01-27 12:31:37,079 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:43:46] 2026-01-27 12:31:37,081 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:43:46]  *** Error codes and diagnostics ***
[2026-01-27 13:43:46]     "exeErrorCode": 0,
[2026-01-27 13:43:46]     "exeErrorDiag": "",
[2026-01-27 13:43:46]     "pilotErrorCode": 0,
[2026-01-27 13:43:46]     "pilotErrorDiag": "",
[2026-01-27 13:43:46]  *** Listing of results directory ***
[2026-01-27 13:43:46] total 479760
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-27 13:43:46] -rwx------ 1 boinc boinc     36322 Jan 25 23:55 runpilot2-wrapper.sh
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:56 queuedata.json
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc       100 Jan 27 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:43:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 05:06 run_atlas
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc       105 Jan 27 05:06 job.xml
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc 273874814 Jan 27 05:52 EVNT.48329871._000004.pool.root.1
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc      6638 Jan 27 05:52 init_data.xml
[2026-01-27 13:43:46] drwxrwx--x 2 boinc boinc      4096 Jan 27 05:52 shared
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc    597767 Jan 27 05:52 input.tar.gz
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:52 start_atlas.sh
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc         0 Jan 27 05:52 boinc_lockfile
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc      2608 Jan 27 05:52 pandaJob.out
[2026-01-27 13:43:46] -rw------- 1 boinc boinc   1006441 Jan 27 05:52 agis_schedconf.cvmfs.json
[2026-01-27 13:43:46] -rw------- 1 boinc boinc       448 Jan 27 05:52 workernode_map.json
[2026-01-27 13:43:46] drwx------ 5 boinc boinc      4096 Jan 27 05:52 pilot3
[2026-01-27 13:43:46] -rw------- 1 boinc boinc 204670488 Jan 27 13:29 HITS.48329874._000094.pool.root.1
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc       529 Jan 27 13:30 boinc_task_state.xml
[2026-01-27 13:43:46] -rw------- 1 boinc boinc      1036 Jan 27 13:30 memory_monitor_summary.json
[2026-01-27 13:43:46] -rw------- 1 boinc boinc        95 Jan 27 13:30 pilot_heartbeat.json
[2026-01-27 13:43:46] -rw------- 1 boinc boinc   1516246 Jan 27 13:30 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:43:46] -rw------- 1 boinc boinc    589289 Jan 27 13:30 log.48329874._000094.job.log.tgz.1
[2026-01-27 13:43:46] -rw------- 1 boinc boinc      6397 Jan 27 13:30 heartbeat.json
[2026-01-27 13:43:46] -rw------- 1 boinc boinc      4829 Jan 27 13:31 pilotlog.txt
[2026-01-27 13:43:46] -rw------- 1 boinc boinc   3804051 Jan 27 13:31 log.48329874._000094.job.log.1
[2026-01-27 13:43:46] -rw------- 1 boinc boinc       357 Jan 27 13:31 output.list
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc       620 Jan 27 13:31 runtime_log
[2026-01-27 13:43:46] -rw------- 1 boinc boinc   4413440 Jan 27 13:31 result.tar.gz
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc      9205 Jan 27 13:31 runtime_log.err
[2026-01-27 13:43:46] -rw------- 1 boinc boinc       669 Jan 27 13:31 g0dKDmoBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRa8KDmK1xjNm.diag
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc        27 Jan 27 13:43 wrapper_checkpoint.txt
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc      8192 Jan 27 13:43 boinc_mmap_file
[2026-01-27 13:43:46] -rw-r--r-- 1 boinc boinc     21156 Jan 27 13:43 stderr.txt
[2026-01-27 13:43:46] HITS file was successfully produced:
[2026-01-27 13:43:46] -rw------- 1 boinc boinc 204670488 Jan 27 13:29 shared/HITS.pool.root.1
[2026-01-27 13:43:46]  *** Contents of shared directory: ***
[2026-01-27 13:43:46] total 472252
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc 273874814 Jan 27 05:52 ATLAS.root_0
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc    597767 Jan 27 05:52 input.tar.gz
[2026-01-27 13:43:46] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:52 start_atlas.sh
[2026-01-27 13:43:46] -rw------- 1 boinc boinc 204670488 Jan 27 13:29 HITS.pool.root.1
[2026-01-27 13:43:46] -rw------- 1 boinc boinc   4413440 Jan 27 13:31 result.tar.gz
13:43:48 (1551764): run_atlas exited; CPU time 103951.594345
13:43:48 (1551764): called boinc_finish(0)

</stderr_txt>
]]>

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