Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:38:03 (735096): wrapper (7.7.26015): starting
08:38:03 (735096): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 08:38:03] Arguments: --nthreads 12
[2026-01-26 08:38:03] Threads: 12
[2026-01-26 08:38:03] Checking for CVMFS
[2026-01-26 08:38:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:38:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:38:03] 2.13.0.0 88587 2186 45208 155540 1 50 80102594 82903041 0 130560 0 441810 99.976 32662 392 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 08:38:03] CVMFS is ok
[2026-01-26 08:38:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:38:03] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 08:38:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 08:38:03] Further information can be found at the LHC@home message board.
[2026-01-26 08:38:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:38:03] Checking for apptainer binary...
[2026-01-26 08:38:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:38:03] Running /usr/bin/apptainer --version
[2026-01-26 08:38:03] apptainer version 1.4.5
[2026-01-26 08:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:38:03] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2026-01-26 08:38:03] apptainer works
[2026-01-26 08:38:03] Set ATHENA_PROC_NUMBER=12
[2026-01-26 08:38:03] Set ATHENA_CORE_NUMBER=12
[2026-01-26 08:38:03] Starting ATLAS job with PandaID=6983466548
[2026-01-26 08:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 09:58:35]  *** The last 200 lines of the pilot log: ***
[2026-01-26 09:58:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 09:58:35]  is_altstaged=None
[2026-01-26 09:58:35]  is_tar=False
[2026-01-26 09:58:35]  lfn=log.48329874._000032.job.log.tgz.1
[2026-01-26 09:58:35]  mtime=0
[2026-01-26 09:58:35]  protocol_id=None
[2026-01-26 09:58:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 09:58:35]  replicas=None
[2026-01-26 09:58:35]  scope=mc23_13p6TeV
[2026-01-26 09:58:35]  status=None
[2026-01-26 09:58:35]  status_code=0
[2026-01-26 09:58:35]  storage_token=
[2026-01-26 09:58:35]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6983466548/log.48329874._000032.job.log.tgz.1
[2026-01-26 09:58:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/85/log.48329874._000032.job.log.tgz.1
[2026-01-26 09:58:35]  workdir=None
[2026-01-26 09:58:35] ]
[2026-01-26 09:58:35] 2026-01-26 09:57:44,913 | INFO     | transferring file log.48329874._000032.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466548/log.48329874._000032.job.log.tgz.1 to /var/lib/boinc
[2026-01-26 09:58:35] 2026-01-26 09:57:44,913 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466548/log.48329874._000032.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.483298
[2026-01-26 09:58:35] 2026-01-26 09:57:44,937 | INFO     | adding to output.list: log.48329874._000032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/85/log.48329874._000032.job.log.tg
[2026-01-26 09:58:35] 2026-01-26 09:57:44,938 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 09:58:35] 2026-01-26 09:57:44,938 | INFO     | summary of transferred files:
[2026-01-26 09:58:35] 2026-01-26 09:57:44,938 | INFO     |  -- lfn=log.48329874._000032.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 09:58:35] 2026-01-26 09:57:44,938 | INFO     | stage-out finished correctly
[2026-01-26 09:58:35] 2026-01-26 09:57:46,705 | INFO     | time since job start (4765s) is within the limit (349056.0s)
[2026-01-26 09:58:35] 2026-01-26 09:57:46,925 | INFO     | monitor loop #367: job 0:6983466548 is in state 'finished'
[2026-01-26 09:58:35] 2026-01-26 09:57:46,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 09:58:35] 2026-01-26 09:57:47,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 09:58:35] 2026-01-26 09:57:48,716 | INFO     | time since job start (4767s) is within the limit (349056.0s)
[2026-01-26 09:58:35] 2026-01-26 09:57:49,428 | INFO     | monitor loop #368: job 0:6983466548 is in state 'finished'
[2026-01-26 09:58:35] 2026-01-26 09:57:49,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 09:58:35] 2026-01-26 09:57:49,770 | INFO     | PID=738814 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 09:58:35] 2026-01-26 09:57:50,366 | INFO     | job 6983466548 has state=finished
[2026-01-26 09:58:35] 2026-01-26 09:57:50,375 | INFO     | preparing for final server update for job 6983466548 in state='finished'
[2026-01-26 09:58:35] 2026-01-26 09:57:50,375 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466548/jobReport.json
[2026-01-26 09:58:35] 2026-01-26 09:57:50,377 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-26 09:58:35] 2026-01-26 09:57:50,378 | INFO     | this job has now completed (state=finished)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,378 | INFO     | log transfer has been attempted: DONE
[2026-01-26 09:58:35] 2026-01-26 09:57:50,378 | INFO     | job 6983466548 has finished - writing final server update
[2026-01-26 09:58:35] 2026-01-26 09:57:50,378 | INFO     | total number of processed events: 400 (read)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,379 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466548/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,380 | INFO     | extracted standard info from prmon json
[2026-01-26 09:58:35] 2026-01-26 09:57:50,380 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 09:58:35] 2026-01-26 09:57:50,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 09:58:35] 2026-01-26 09:57:50,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 09:58:35] 2026-01-26 09:57:50,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | fitting pss+swap vs Time
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | sum of square deviations: 110960220.0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | sum of deviations: -14652755100.0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | mean x: 1769419166.0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | mean y: 2911392.0422535213
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | intersect: 233662016507.7697
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | chi2: 0.10213271258139209
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | current memory leak: -132.05 B/s (using 71 data points, chi2=0.10)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | could have reported an average CPU frequency of 3999 MHz (6 samples)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | ..............................
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . Timing measurements:
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . get job = 0 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . initial setup = 6 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . payload setup = 8 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . stage-in = 0 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . payload execution = 4738 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . stage-out = 0 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | . log creation = 0 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,381 | INFO     | ..............................
[2026-01-26 09:58:35] 2026-01-26 09:57:50,425 | INFO     | 
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | job summary report
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | --------------------------------------------------
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | PanDA job id: 6983466548
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | task id: 48329874
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | errors: (none)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | pilot state: finished 
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | transexitcode: 0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | exeerrorcode: 0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | exeerrordiag: 
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | exitcode: 0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | exitmsg: OK
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | cpuconsumptiontime: 49891 s
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | nevents: 400
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | neventsw: 0
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | pid: 743389
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | pgrp: 743389
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | corecount: 12
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | event service: False
[2026-01-26 09:58:35] 2026-01-26 09:57:50,426 | INFO     | sizes: {0: 2284159, 1: 2284393, 11: 2284393, 4751: 2310582, 4753: 2319594, 4755: 2319650, 4758: 2319972}
[2026-01-26 09:58:35] 2026-01-26 09:57:50,427 | INFO     | --------------------------------------------------
[2026-01-26 09:58:35] 2026-01-26 09:57:50,427 | INFO     | 
[2026-01-26 09:58:35] 2026-01-26 09:57:50,427 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-26 09:58:35] 2026-01-26 09:57:50,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | job 6983466548 has completed (purged errors)
[2026-01-26 09:58:35] 2026-01-26 09:57:50,446 | INFO     | overall cleanup function is called
[2026-01-26 09:58:35] 2026-01-26 09:57:51,453 | INFO     | --- collectZombieJob: --- 10, [743389]
[2026-01-26 09:58:35] 2026-01-26 09:57:51,454 | INFO     | zombie collector waiting for pid 743389
[2026-01-26 09:58:35] 2026-01-26 09:57:51,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 09:58:35] 2026-01-26 09:57:51,454 | INFO     | collected zombie processes
[2026-01-26 09:58:35] 2026-01-26 09:57:51,454 | INFO     | will attempt to kill all subprocesses of pid=743389
[2026-01-26 09:58:35] 2026-01-26 09:57:51,493 | INFO     | process IDs to be killed: [743389] (in reverse order)
[2026-01-26 09:58:35] 2026-01-26 09:57:51,533 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 09:58:35] 2026-01-26 09:57:51,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 09:58:35] 2026-01-26 09:57:51,536 | INFO     | did not find any defunct processes belonging to 743389
[2026-01-26 09:58:35] 2026-01-26 09:57:51,538 | INFO     | did not find any defunct processes belonging to 743389
[2026-01-26 09:58:35] 2026-01-26 09:57:51,538 | INFO     | ready for new job
[2026-01-26 09:58:35] 2026-01-26 09:57:51,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 09:58:35] 2026-01-26 09:57:51,539 | INFO     | **************************************
[2026-01-26 09:58:35] 2026-01-26 09:57:51,540 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 09:58:35] 2026-01-26 09:57:51,540 | INFO     | **************************************
[2026-01-26 09:58:35] 2026-01-26 09:57:51,540 | INFO     | 
[2026-01-26 09:58:35] 2026-01-26 09:57:51,540 | INFO     | architecture information:
[2026-01-26 09:58:35] 2026-01-26 09:57:51,540 | INFO     | executing command: cat /etc/os-release
[2026-01-26 09:58:35] 2026-01-26 09:57:51,556 | INFO     | cat /etc/os-release:
[2026-01-26 09:58:35] NAME="CentOS Linux"
[2026-01-26 09:58:35] VERSION="7 (Core)"
[2026-01-26 09:58:35] ID="centos"
[2026-01-26 09:58:35] ID_LIKE="rhel fedora"
[2026-01-26 09:58:35] VERSION_ID="7"
[2026-01-26 09:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 09:58:35] ANSI_COLOR="0;31"
[2026-01-26 09:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 09:58:35] HOME_URL="https://www.centos.org/"
[2026-01-26 09:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 09:58:35] 
[2026-01-26 09:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 09:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 09:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 09:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 09:58:35] 
[2026-01-26 09:58:35] 2026-01-26 09:57:51,556 | INFO     | **************************************
[2026-01-26 09:58:35] 2026-01-26 09:57:52,059 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-26 09:58:35] 2026-01-26 09:57:52,079 | INFO     | sufficient remaining disk space (623538864128 B)
[2026-01-26 09:58:35] 2026-01-26 09:57:52,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 09:58:35] 2026-01-26 09:57:52,079 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 09:58:35] 2026-01-26 09:57:52,079 | INFO     | update_server=False
[2026-01-26 09:58:35] 2026-01-26 09:57:52,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 09:58:35] 2026-01-26 09:57:52,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 09:58:35] 2026-01-26 09:57:52,334 | INFO     | all data control threads have been joined
[2026-01-26 09:58:35] 2026-01-26 09:57:52,937 | INFO     | all payload control threads have been joined
[2026-01-26 09:58:35] 2026-01-26 09:57:52,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 09:58:35] 2026-01-26 09:57:52,940 | INFO     | aborting loop
[2026-01-26 09:58:35] 2026-01-26 09:57:52,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 09:58:35] 2026-01-26 09:57:53,085 | INFO     | [job] retrieve thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,086 | INFO     | [job] queue monitor thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,250 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,340 | INFO     | [data] control thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,429 | INFO     | all job control threads have been joined
[2026-01-26 09:58:35] 2026-01-26 09:57:53,512 | INFO     | [job] validate thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 09:58:35] 2026-01-26 09:57:53,747 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,874 | INFO     | [payload] validate_post thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,933 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,942 | INFO     | [payload] control thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:53,945 | INFO     | [job] job monitor thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:54,219 | INFO     | [data] copytool_in thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:54,356 | INFO     | [payload] failed_post thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:54,434 | INFO     | [job] control thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:54,989 | INFO     | [data] copytool_out thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:57:57,749 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:58:02,458 | INFO     | job.realtimelogging is not enabled
[2026-01-26 09:58:35] 2026-01-26 09:58:03,464 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 09:58:35] 2026-01-26 09:58:21,878 | INFO     | PID=738814 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 09:58:35] 2026-01-26 09:58:21,879 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 09:58:35] 2026-01-26 09:58:21,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 09:58:35] 2026-01-26 09:58:21,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 09:58:35] 2026-01-26 09:58:28,779 | INFO     | [monitor] cgroup control has ended
[2026-01-26 09:58:35] 2026-01-26 09:58:30,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133329152440128)>', '<ExcThread(monitor, started 133328493586176)>']
[2026-01-26 09:58:35] 2026-01-26 09:58:30,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 09:58:35] 2026-01-26 09:58:30,924 | INFO     | [monitor] control thread has ended
[2026-01-26 09:58:35] 2026-01-26 09:58:35,430 | INFO     | all workflow threads have been joined
[2026-01-26 09:58:35] 2026-01-26 09:58:35,430 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 09:58:35] 2026-01-26 09:58:35,430 | INFO     | traces error code: 0
[2026-01-26 09:58:35] 2026-01-26 09:58:35,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 09:58:35] 2026-01-26 09:58:35,620 [wrapper] ==== pilot stdout END ====
[2026-01-26 09:58:35] 2026-01-26 09:58:35,622 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 09:58:35] 2026-01-26 09:58:35,624 [wrapper] pilotpid: 738814
[2026-01-26 09:58:35] 2026-01-26 09:58:35,628 [wrapper] Pilot exit status: 0
[2026-01-26 09:58:35] 2026-01-26 09:58:35,636 [wrapper] pandaids: 6983466548
[2026-01-26 09:58:35] 2026-01-26 09:58:35,653 [wrapper] cleanup supervisor_pilot  764300 738815
[2026-01-26 09:58:35] 2026-01-26 09:58:35,657 [wrapper] Test setup, not cleaning
[2026-01-26 09:58:35] 2026-01-26 09:58:35,658 [wrapper] apfmon messages muted
[2026-01-26 09:58:35] 2026-01-26 09:58:35,659 [wrapper] ==== wrapper stdout END ====
[2026-01-26 09:58:35] 2026-01-26 09:58:35,660 [wrapper] ==== wrapper stderr END ====
[2026-01-26 09:58:35]  *** Error codes and diagnostics ***
[2026-01-26 09:58:35]     "exeErrorCode": 0,
[2026-01-26 09:58:35]     "exeErrorDiag": "",
[2026-01-26 09:58:35]     "pilotErrorCode": 0,
[2026-01-26 09:58:35]     "pilotErrorDiag": "",
[2026-01-26 09:58:35]  *** Listing of results directory ***
[2026-01-26 09:58:35] total 473544
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc    584422 Jan 25 22:54 pilot3.tar.gz
[2026-01-26 09:58:35] -rwx------ 1 boinc boinc     36322 Jan 25 22:55 runpilot2-wrapper.sh
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc      5111 Jan 25 22:56 queuedata.json
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc       100 Jan 26 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 09:58:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 08:38 run_atlas
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc       105 Jan 26 08:38 job.xml
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc      9904 Jan 26 08:38 init_data.xml
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc 275208789 Jan 26 08:38 EVNT.48329871._000002.pool.root.1
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:38 start_atlas.sh
[2026-01-26 09:58:35] drwxrwx--x 2 boinc boinc      4096 Jan 26 08:38 shared
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc    597760 Jan 26 08:38 input.tar.gz
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc         0 Jan 26 08:38 boinc_lockfile
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc      2608 Jan 26 08:38 pandaJob.out
[2026-01-26 09:58:35] -rw------- 1 boinc boinc   1004254 Jan 26 08:38 agis_schedconf.cvmfs.json
[2026-01-26 09:58:35] -rw------- 1 boinc boinc   1516246 Jan 26 08:38 agis_ddmendpoints.agis.ALL.json
[2026-01-26 09:58:35] -rw------- 1 boinc boinc       420 Jan 26 08:38 workernode_map.json
[2026-01-26 09:58:35] drwx------ 5 boinc boinc      4096 Jan 26 08:38 pilot3
[2026-01-26 09:58:35] -rw------- 1 boinc boinc 203581238 Jan 26 09:57 HITS.48329874._000032.pool.root.1
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc       529 Jan 26 09:57 boinc_task_state.xml
[2026-01-26 09:58:35] -rw------- 1 boinc boinc      1055 Jan 26 09:57 memory_monitor_summary.json
[2026-01-26 09:58:35] -rw------- 1 boinc boinc    381533 Jan 26 09:57 log.48329874._000032.job.log.tgz.1
[2026-01-26 09:58:35] -rw------- 1 boinc boinc      6350 Jan 26 09:57 heartbeat.json
[2026-01-26 09:58:35] -rw------- 1 boinc boinc        95 Jan 26 09:58 pilot_heartbeat.json
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc        27 Jan 26 09:58 wrapper_checkpoint.txt
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc      8192 Jan 26 09:58 boinc_mmap_file
[2026-01-26 09:58:35] -rw------- 1 boinc boinc      4823 Jan 26 09:58 pilotlog.txt
[2026-01-26 09:58:35] -rw------- 1 boinc boinc    701812 Jan 26 09:58 log.48329874._000032.job.log.1
[2026-01-26 09:58:35] -rw------- 1 boinc boinc       357 Jan 26 09:58 output.list
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc       620 Jan 26 09:58 runtime_log
[2026-01-26 09:58:35] -rw------- 1 boinc boinc   1105920 Jan 26 09:58 result.tar.gz
[2026-01-26 09:58:35] -rw------- 1 boinc boinc       656 Jan 26 09:58 sesKDmmBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmo11KDm24f9Po.diag
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc      9046 Jan 26 09:58 runtime_log.err
[2026-01-26 09:58:35] -rw-r--r-- 1 boinc boinc     21793 Jan 26 09:58 stderr.txt
[2026-01-26 09:58:35] HITS file was successfully produced:
[2026-01-26 09:58:35] -rw------- 1 boinc boinc 203581238 Jan 26 09:57 shared/HITS.pool.root.1
[2026-01-26 09:58:35]  *** Contents of shared directory: ***
[2026-01-26 09:58:35] total 469260
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc 275208789 Jan 26 08:38 ATLAS.root_0
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 08:38 start_atlas.sh
[2026-01-26 09:58:35] -rw-r--r-- 2 boinc boinc    597760 Jan 26 08:38 input.tar.gz
[2026-01-26 09:58:35] -rw------- 1 boinc boinc 203581238 Jan 26 09:57 HITS.pool.root.1
[2026-01-26 09:58:35] -rw------- 1 boinc boinc   1105920 Jan 26 09:58 result.tar.gz
09:58:37 (735096): run_atlas exited; CPU time 49769.198766
09:58:37 (735096): called boinc_finish(0)

</stderr_txt>
]]>

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