Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:29 (1157243): wrapper (7.7.26015): starting
18:00:29 (1157243): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 18:00:29] Arguments: --nthreads 4
[2026-01-26 18:00:29] Threads: 4
[2026-01-26 18:00:29] Checking for CVMFS
[2026-01-26 18:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:00:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:00:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:00:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:00:32] 2.9.2.0 3774380 8353 102304 155554 3 49 22967955 36864000 0 130560 0 4147286 99.988 264195 5734 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 18:00:32] CVMFS is ok
[2026-01-26 18:00:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:00:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:00:32] Further information can be found at the LHC@home message board.
[2026-01-26 18:00:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:00:32] Checking for apptainer binary...
[2026-01-26 18:00:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:00:32] Running /usr/bin/apptainer --version
[2026-01-26 18:00:32] apptainer version 1.4.1-1.1
[2026-01-26 18:00:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:00:32] thA309
[2026-01-26 18:00:32] apptainer works
[2026-01-26 18:00:32] Set ATHENA_PROC_NUMBER=4
[2026-01-26 18:00:32] Set ATHENA_CORE_NUMBER=4
[2026-01-26 18:00:32] Starting ATLAS job with PandaID=6983601790
[2026-01-26 18:00:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:54:08]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:54:08] 2026-01-26 20:53:15,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:54:08] 2026-01-26 20:53:15,582 | INFO     | did not find any defunct processes belonging to 1165862
[2026-01-26 21:54:08] 2026-01-26 20:53:15,583 | INFO     | did not find any defunct processes belonging to 1165862
[2026-01-26 21:54:08] 2026-01-26 20:53:15,583 | INFO     | ready for new job
[2026-01-26 21:54:08] 2026-01-26 20:53:15,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:54:08] 2026-01-26 20:53:15,584 | INFO     | **************************************
[2026-01-26 21:54:08] 2026-01-26 20:53:15,584 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:54:08] 2026-01-26 20:53:15,584 | INFO     | **************************************
[2026-01-26 21:54:08] 2026-01-26 20:53:15,584 | INFO     | 
[2026-01-26 21:54:08] 2026-01-26 20:53:15,585 | INFO     | architecture information:
[2026-01-26 21:54:08] 2026-01-26 20:53:15,585 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:54:08] 2026-01-26 20:53:15,600 | INFO     | cat /etc/os-release:
[2026-01-26 21:54:08] NAME="CentOS Linux"
[2026-01-26 21:54:08] VERSION="7 (Core)"
[2026-01-26 21:54:08] ID="centos"
[2026-01-26 21:54:08] ID_LIKE="rhel fedora"
[2026-01-26 21:54:08] VERSION_ID="7"
[2026-01-26 21:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:54:08] ANSI_COLOR="0;31"
[2026-01-26 21:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:54:08] HOME_URL="https://www.centos.org/"
[2026-01-26 21:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:54:08] 
[2026-01-26 21:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:54:08] 
[2026-01-26 21:54:08] 2026-01-26 20:53:15,600 | INFO     | **************************************
[2026-01-26 21:54:08] 2026-01-26 20:53:16,103 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 21:54:08] 2026-01-26 20:53:16,121 | INFO     | sufficient remaining disk space (234631462912 B)
[2026-01-26 21:54:08] 2026-01-26 20:53:16,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:54:08] 2026-01-26 20:53:16,122 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:54:08] 2026-01-26 20:53:16,122 | INFO     | update_server=False
[2026-01-26 21:54:08] 2026-01-26 20:53:16,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:54:08] 2026-01-26 20:53:16,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:54:08] 2026-01-26 20:53:16,292 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 21:54:08] 2026-01-26 20:53:16,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 21:54:08] 2026-01-26 20:53:16,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:54:08] 2026-01-26 20:53:16,293 | INFO     | will abort loop
[2026-01-26 21:54:08] 2026-01-26 20:53:16,645 | INFO     | all data control threads have been joined
[2026-01-26 21:54:08] 2026-01-26 20:53:17,128 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,129 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,152 | INFO     | all job control threads have been joined
[2026-01-26 21:54:08] 2026-01-26 20:53:17,298 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,444 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,520 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,526 | INFO     | all payload control threads have been joined
[2026-01-26 21:54:08] 2026-01-26 20:53:17,619 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:17,651 | INFO     | [data] control thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,128 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,157 | INFO     | [job] control thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,465 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,474 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,532 | INFO     | [payload] control thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:18,570 | INFO     | [job] validate thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:19,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:54:08] 2026-01-26 20:53:19,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:54:08] 2026-01-26 20:53:20,125 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:23,341 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:27,096 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:54:08] 2026-01-26 20:53:28,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:54:08] 2026-01-26 20:53:45,748 | INFO     | PID=1161353 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:54:08] 2026-01-26 20:53:45,748 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:54:08] 2026-01-26 20:53:45,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:54:08] 2026-01-26 20:53:45,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:54:08] 2026-01-26 20:54:01,696 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:54:08] 2026-01-26 20:54:03,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116664289088)>', '<ExcThread(monitor, started 140115523401472)>']
[2026-01-26 21:54:08] 2026-01-26 20:54:03,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:54:08] 2026-01-26 20:54:03,845 | INFO     | [monitor] control thread has ended
[2026-01-26 21:54:08] 2026-01-26 20:54:08,624 | INFO     | all workflow threads have been joined
[2026-01-26 21:54:08] 2026-01-26 20:54:08,624 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:54:08] 2026-01-26 20:54:08,624 | INFO     | traces error code: 0
[2026-01-26 21:54:08] 2026-01-26 20:54:08,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:54:08] 2026-01-26 20:54:08,707 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:54:08] 2026-01-26 20:54:08,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:54:08] 2026-01-26 20:54:08,715 [wrapper] pilotpid: 1161353
[2026-01-26 21:54:08] 2026-01-26 20:54:08,718 [wrapper] Pilot exit status: 0
[2026-01-26 21:54:08] 2026-01-26 20:54:08,730 [wrapper] pandaids: 6983601790
[2026-01-26 21:54:08] 2026-01-26 20:54:08,755 [wrapper] cleanup supervisor_pilot 1174289 1161354
[2026-01-26 21:54:08] 2026-01-26 20:54:08,759 [wrapper] Test setup, not cleaning
[2026-01-26 21:54:08] 2026-01-26 20:54:08,763 [wrapper] apfmon messages muted
[2026-01-26 21:54:08] 2026-01-26 20:54:08,767 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:54:08] 2026-01-26 20:54:08,772 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:54:08]  *** Error codes and diagnostics ***
[2026-01-26 21:54:08]     "exeErrorCode": 0,
[2026-01-26 21:54:08]     "exeErrorDiag": "",
[2026-01-26 21:54:08]     "pilotErrorCode": 0,
[2026-01-26 21:54:08]     "pilotErrorDiag": "",
[2026-01-26 21:54:08]  *** Listing of results directory ***
[2026-01-26 21:54:08] total 469212
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-26 21:54:08] -rwx------ 1 boinc boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:56 queuedata.json
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc       100 Jan 26 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:54:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 18:00 run_atlas
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc       105 Jan 26 18:00 job.xml
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc 265271899 Jan 26 18:00 EVNT.48329259._000003.pool.root.1
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc    597773 Jan 26 18:00 input.tar.gz
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:00 start_atlas.sh
[2026-01-26 21:54:08] drwxrwx--x 2 boinc boinc      4096 Jan 26 18:00 shared
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc         0 Jan 26 18:00 boinc_setup_complete
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc      6377 Jan 26 18:00 init_data.xml
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc         0 Jan 26 18:00 boinc_lockfile
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc      2606 Jan 26 18:00 pandaJob.out
[2026-01-26 21:54:08] -rw------- 1 boinc boinc   1006276 Jan 26 18:00 agis_schedconf.cvmfs.json
[2026-01-26 21:54:08] -rw------- 1 boinc boinc       427 Jan 26 18:00 workernode_map.json
[2026-01-26 21:54:08] drwx------ 5 boinc boinc      4096 Jan 26 18:00 pilot3
[2026-01-26 21:54:08] -rw------- 1 boinc boinc 206549806 Jan 26 21:52 HITS.48329261._000062.pool.root.1
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc       531 Jan 26 21:52 boinc_task_state.xml
[2026-01-26 21:54:08] -rw------- 1 boinc boinc        95 Jan 26 21:53 pilot_heartbeat.json
[2026-01-26 21:54:08] -rw------- 1 boinc boinc      1033 Jan 26 21:53 memory_monitor_summary.json
[2026-01-26 21:54:08] -rw------- 1 boinc boinc   1516246 Jan 26 21:53 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:54:08] -rw------- 1 boinc boinc    396131 Jan 26 21:53 log.48329261._000062.job.log.tgz.1
[2026-01-26 21:54:08] -rw------- 1 boinc boinc      6303 Jan 26 21:53 heartbeat.json
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:53 boinc_mmap_file
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc        28 Jan 26 21:53 wrapper_checkpoint.txt
[2026-01-26 21:54:08] -rw------- 1 boinc boinc      5006 Jan 26 21:54 pilotlog.txt
[2026-01-26 21:54:08] -rw------- 1 boinc boinc   1966369 Jan 26 21:54 log.48329261._000062.job.log.1
[2026-01-26 21:54:08] -rw------- 1 boinc boinc       357 Jan 26 21:54 output.list
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:54 runtime_log
[2026-01-26 21:54:08] -rw------- 1 boinc boinc   2375680 Jan 26 21:54 result.tar.gz
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc      8897 Jan 26 21:54 runtime_log.err
[2026-01-26 21:54:08] -rw------- 1 boinc boinc       661 Jan 26 21:54 ezdMDmQBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzX8KDmSzYnCo.diag
[2026-01-26 21:54:08] -rw-r--r-- 1 boinc boinc     10183 Jan 26 21:54 stderr.txt
[2026-01-26 21:54:08] HITS file was successfully produced:
[2026-01-26 21:54:08] -rw------- 1 boinc boinc 206549806 Jan 26 21:52 shared/HITS.pool.root.1
[2026-01-26 21:54:08]  *** Contents of shared directory: ***
[2026-01-26 21:54:08] total 463696
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc 265271899 Jan 26 18:00 ATLAS.root_0
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc    597773 Jan 26 18:00 input.tar.gz
[2026-01-26 21:54:08] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:00 start_atlas.sh
[2026-01-26 21:54:08] -rw------- 1 boinc boinc 206549806 Jan 26 21:52 HITS.pool.root.1
[2026-01-26 21:54:08] -rw------- 1 boinc boinc   2375680 Jan 26 21:54 result.tar.gz
21:54:10 (1157243): run_atlas exited; CPU time 54476.939044
21:54:10 (1157243): called boinc_finish(0)

</stderr_txt>
]]>

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