Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:37:29 (321062): wrapper (7.7.26015): starting
03:37:29 (321062): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 03:37:29] Arguments: --nthreads 4
[2026-01-26 03:37:29] Threads: 4
[2026-01-26 03:37:29] Checking for CVMFS
[2026-01-26 03:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 03:37:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 03:37:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 03:37:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 03:37:32] 2.13.3.0 8987 8051 59196 155545 1 50 5974622 6144001 13845 130560 0 58584316 99.999 243405 783 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 03:37:32] CVMFS is ok
[2026-01-26 03:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 03:37:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 03:37:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 03:37:32] Further information can be found at the LHC@home message board.
[2026-01-26 03:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 03:37:32] Checking for apptainer binary...
[2026-01-26 03:37:32] apptainer is not installed, using version from CVMFS
[2026-01-26 03:37:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 03:37:32] p8
[2026-01-26 03:37:32] apptainer works
[2026-01-26 03:37:32] Set ATHENA_PROC_NUMBER=4
[2026-01-26 03:37:32] Set ATHENA_CORE_NUMBER=4
[2026-01-26 03:37:32] Starting ATLAS job with PandaID=6983467817
[2026-01-26 03:37:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/data/boinc-0/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 05:01:58]  *** The last 200 lines of the pilot log: ***
[2026-01-26 05:01:58]  guid=f6eee94a-31e5-4334-968b-01466992393b
[2026-01-26 05:01:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 05:01:58]  is_altstaged=None
[2026-01-26 05:01:58]  is_tar=False
[2026-01-26 05:01:58]  lfn=log.48318034._001855.job.log.tgz.1
[2026-01-26 05:01:58]  mtime=0
[2026-01-26 05:01:58]  protocol_id=None
[2026-01-26 05:01:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 05:01:58]  replicas=None
[2026-01-26 05:01:58]  scope=mc23_13p6TeV
[2026-01-26 05:01:58]  status=None
[2026-01-26 05:01:58]  status_code=0
[2026-01-26 05:01:58]  storage_token=
[2026-01-26 05:01:58]  surl=/mnt/data/boinc-0/slots/4/PanDA_Pilot-6983467817/log.48318034._001855.job.log.tgz.1
[2026-01-26 05:01:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/06/log.48318034._001855.job.log.tgz.1
[2026-01-26 05:01:58]  workdir=None
[2026-01-26 05:01:58] ]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,115 | INFO     | transferring file log.48318034._001855.job.log.tgz.1 from /mnt/data/boinc-0/slots/4/PanDA_Pilot-6983467817/log.48318034._001855.job.log.tgz.1 to /mnt/data/boinc-0/
[2026-01-26 05:01:58] 2026-01-26 13:01:19,115 | INFO     | executing command: /usr/bin/env mv /mnt/data/boinc-0/slots/4/PanDA_Pilot-6983467817/log.48318034._001855.job.log.tgz.1 /mnt/data/boinc-0/slots/4/log.48318034._0018
[2026-01-26 05:01:58] 2026-01-26 13:01:19,125 | INFO     | adding to output.list: log.48318034._001855.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/06/log.48318034._001855.job.log.tg
[2026-01-26 05:01:58] 2026-01-26 13:01:19,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 05:01:58] 2026-01-26 13:01:19,125 | INFO     | summary of transferred files:
[2026-01-26 05:01:58] 2026-01-26 13:01:19,125 | INFO     |  -- lfn=log.48318034._001855.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 05:01:58] 2026-01-26 13:01:19,125 | INFO     | stage-out finished correctly
[2026-01-26 05:01:58] 2026-01-26 13:01:19,184 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 05:01:58] 2026-01-26 13:01:19,235 | INFO     | job 6983467817 has state=finished
[2026-01-26 05:01:58] 2026-01-26 13:01:19,235 | INFO     | preparing for final server update for job 6983467817 in state='finished'
[2026-01-26 05:01:58] 2026-01-26 13:01:19,235 | INFO     | reading metadata from: /mnt/data/boinc-0/slots/4/PanDA_Pilot-6983467817/jobReport.json
[2026-01-26 05:01:58] 2026-01-26 13:01:19,236 | INFO     | added worker_node to metadata from /mnt/data/boinc-0/slots/4/workernode_map.json
[2026-01-26 05:01:58] 2026-01-26 13:01:19,237 | INFO     | this job has now completed (state=finished)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,237 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,237 | INFO     | log transfer has been attempted: DONE
[2026-01-26 05:01:58] 2026-01-26 13:01:19,237 | INFO     | job 6983467817 has finished - writing final server update
[2026-01-26 05:01:58] 2026-01-26 13:01:19,237 | INFO     | total number of processed events: 400 (read)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,241 | INFO     | using path: /mnt/data/boinc-0/slots/4/PanDA_Pilot-6983467817/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,242 | INFO     | extracted standard info from prmon json
[2026-01-26 05:01:58] 2026-01-26 13:01:19,242 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 05:01:58] 2026-01-26 13:01:19,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 05:01:58] 2026-01-26 13:01:19,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 05:01:58] 2026-01-26 13:01:19,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | fitting pss+swap vs Time
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | sum of square deviations: 130793150.0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | sum of deviations: -2702798980.0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | mean x: 1769430044.0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | mean y: 2370602.6666666665
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | intersect: 36567081507.66861
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | chi2: 0.0026767953147631756
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | current memory leak: -20.66 B/s (using 75 data points, chi2=0.00)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | could have reported an average CPU frequency of 4445 MHz (6 samples)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | ..............................
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | . Timing measurements:
[2026-01-26 05:01:58] 2026-01-26 13:01:19,243 | INFO     | . get job = 0 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . initial setup = 5 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . payload setup = 2 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . stage-in = 0 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . payload execution = 4995 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . stage-out = 0 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | . log creation = 0 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,244 | INFO     | ..............................
[2026-01-26 05:01:58] 2026-01-26 13:01:19,289 | INFO     | 
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | job summary report
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | --------------------------------------------------
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | PanDA job id: 6983467817
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | task id: 48318034
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | errors: (none)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | pilot state: finished 
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | transexitcode: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | exeerrorcode: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | exeerrordiag: 
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | exitcode: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | exitmsg: OK
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | cpuconsumptiontime: 19148 s
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | nevents: 400
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | neventsw: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | pid: 330157
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | pgrp: 330157
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | corecount: 4
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | event service: False
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | sizes: {0: 2284202, 11: 2284202, 5002: 2310636, 5003: 2319834}
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | --------------------------------------------------
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | 
[2026-01-26 05:01:58] 2026-01-26 13:01:19,290 | INFO     | executing command: ls -lF /mnt/data/boinc-0/slots/4
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 05:01:58] 2026-01-26 13:01:19,302 | INFO     | job 6983467817 has completed (purged errors)
[2026-01-26 05:01:58] 2026-01-26 13:01:19,302 | INFO     | overall cleanup function is called
[2026-01-26 05:01:58] 2026-01-26 13:01:20,308 | INFO     | --- collectZombieJob: --- 10, [330157]
[2026-01-26 05:01:58] 2026-01-26 13:01:20,308 | INFO     | zombie collector waiting for pid 330157
[2026-01-26 05:01:58] 2026-01-26 13:01:20,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 05:01:58] 2026-01-26 13:01:20,308 | INFO     | collected zombie processes
[2026-01-26 05:01:58] 2026-01-26 13:01:20,308 | INFO     | will attempt to kill all subprocesses of pid=330157
[2026-01-26 05:01:58] 2026-01-26 13:01:20,430 | INFO     | process IDs to be killed: [330157] (in reverse order)
[2026-01-26 05:01:58] 2026-01-26 13:01:20,484 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 05:01:58] 2026-01-26 13:01:20,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 05:01:58] 2026-01-26 13:01:20,490 | INFO     | did not find any defunct processes belonging to 330157
[2026-01-26 05:01:58] 2026-01-26 13:01:20,493 | INFO     | did not find any defunct processes belonging to 330157
[2026-01-26 05:01:58] 2026-01-26 13:01:20,493 | INFO     | ready for new job
[2026-01-26 05:01:58] 2026-01-26 13:01:20,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 05:01:58] 2026-01-26 13:01:20,494 | INFO     | **************************************
[2026-01-26 05:01:58] 2026-01-26 13:01:20,494 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 05:01:58] 2026-01-26 13:01:20,494 | INFO     | **************************************
[2026-01-26 05:01:58] 2026-01-26 13:01:20,494 | INFO     | 
[2026-01-26 05:01:58] 2026-01-26 13:01:20,496 | INFO     | architecture information:
[2026-01-26 05:01:58] 2026-01-26 13:01:20,496 | INFO     | executing command: cat /etc/os-release
[2026-01-26 05:01:58] 2026-01-26 13:01:20,509 | INFO     | cat /etc/os-release:
[2026-01-26 05:01:58] NAME="CentOS Linux"
[2026-01-26 05:01:58] VERSION="7 (Core)"
[2026-01-26 05:01:58] ID="centos"
[2026-01-26 05:01:58] ID_LIKE="rhel fedora"
[2026-01-26 05:01:58] VERSION_ID="7"
[2026-01-26 05:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 05:01:58] ANSI_COLOR="0;31"
[2026-01-26 05:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 05:01:58] HOME_URL="https://www.centos.org/"
[2026-01-26 05:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 05:01:58] 
[2026-01-26 05:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 05:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 05:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 05:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 05:01:58] 
[2026-01-26 05:01:58] 2026-01-26 13:01:20,509 | INFO     | **************************************
[2026-01-26 05:01:58] 2026-01-26 13:01:21,012 | INFO     | executing command: df -mP /mnt/data/boinc-0/slots/4
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | INFO     | sufficient remaining disk space (332690096128 B)
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | INFO     | update_server=False
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 05:01:58] 2026-01-26 13:01:21,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:01:58] 2026-01-26 13:01:21,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 05:01:58] 2026-01-26 13:01:21,152 | INFO     | all data control threads have been joined
[2026-01-26 05:01:58] 2026-01-26 13:01:21,499 | INFO     | all job control threads have been joined
[2026-01-26 05:01:58] 2026-01-26 13:01:21,990 | INFO     | all payload control threads have been joined
[2026-01-26 05:01:58] 2026-01-26 13:01:22,031 | INFO     | [job] queue monitor thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,031 | INFO     | [job] retrieve thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,157 | INFO     | [data] control thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 05:01:58] 2026-01-26 13:01:22,184 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,275 | INFO     | [payload] failed_post thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,505 | INFO     | [job] control thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,573 | WARNING  | process 330157 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 05:01:58] 2026-01-26 13:01:22,654 | INFO     | using path: /mnt/data/boinc-0/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 05:01:58] 2026-01-26 13:01:22,767 | INFO     | [job] validate thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,771 | INFO     | number of running child processes to parent process 330157: 1
[2026-01-26 05:01:58] 2026-01-26 13:01:22,771 | INFO     | maximum number of monitored processes: 6
[2026-01-26 05:01:58] 2026-01-26 13:01:22,771 | INFO     | aborting job monitoring since job object (job id=6983467817) has expired
[2026-01-26 05:01:58] 2026-01-26 13:01:22,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:01:58] 2026-01-26 13:01:22,771 | INFO     | will abort loop
[2026-01-26 05:01:58] 2026-01-26 13:01:22,798 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,923 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,926 | INFO     | [payload] validate_post thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:22,996 | INFO     | [payload] control thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:23,112 | INFO     | [data] copytool_in thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:23,776 | INFO     | [job] job monitor thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:24,182 | INFO     | [data] copytool_out thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:24,274 | INFO     | job.realtimelogging is not enabled
[2026-01-26 05:01:58] 2026-01-26 13:01:25,032 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:25,279 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 05:01:58] 2026-01-26 13:01:52,133 | INFO     | PID=325381 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 05:01:58] 2026-01-26 13:01:52,134 | INFO     | .. there are 16 such processes running
[2026-01-26 05:01:58] 2026-01-26 13:01:52,134 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 05:01:58] 2026-01-26 13:01:52,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 05:01:58] 2026-01-26 13:01:52,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 05:01:58] 2026-01-26 13:01:53,266 | INFO     | [monitor] cgroup control has ended
[2026-01-26 05:01:58] 2026-01-26 13:01:53,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129229875918656)>', '<ExcThread(monitor, started 129229081519872)>']
[2026-01-26 05:01:58] 2026-01-26 13:01:54,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 05:01:58] 2026-01-26 13:01:54,144 | INFO     | [monitor] control thread has ended
[2026-01-26 05:01:58] 2026-01-26 13:01:58,441 | INFO     | all workflow threads have been joined
[2026-01-26 05:01:58] 2026-01-26 13:01:58,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 05:01:58] 2026-01-26 13:01:58,441 | INFO     | traces error code: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:58,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 05:01:58] 2026-01-26 13:01:58,516 [wrapper] ==== pilot stdout END ====
[2026-01-26 05:01:58] 2026-01-26 13:01:58,518 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 05:01:58] 2026-01-26 13:01:58,519 [wrapper] pilotpid: 325381
[2026-01-26 05:01:58] 2026-01-26 13:01:58,520 [wrapper] Pilot exit status: 0
[2026-01-26 05:01:58] 2026-01-26 13:01:58,527 [wrapper] pandaids: 6983467817
[2026-01-26 05:01:58] 2026-01-26 13:01:58,553 [wrapper] cleanup supervisor_pilot  541646 325382
[2026-01-26 05:01:58] 2026-01-26 13:01:58,555 [wrapper] Test setup, not cleaning
[2026-01-26 05:01:58] 2026-01-26 13:01:58,556 [wrapper] apfmon messages muted
[2026-01-26 05:01:58] 2026-01-26 13:01:58,558 [wrapper] ==== wrapper stdout END ====
[2026-01-26 05:01:58] 2026-01-26 13:01:58,559 [wrapper] ==== wrapper stderr END ====
[2026-01-26 05:01:58]  *** Error codes and diagnostics ***
[2026-01-26 05:01:58]     "exeErrorCode": 0,
[2026-01-26 05:01:58]     "exeErrorDiag": "",
[2026-01-26 05:01:58]     "pilotErrorCode": 0,
[2026-01-26 05:01:58]     "pilotErrorDiag": "",
[2026-01-26 05:01:58]  *** Listing of results directory ***
[2026-01-26 05:01:58] total 668872
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc    584422 Jan 25 14:54 pilot3.tar.gz
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc      5111 Jan 25 14:54 queuedata.json
[2026-01-26 05:01:58] -rwx------ 1 boinc boinc     36322 Jan 25 14:54 runpilot2-wrapper.sh
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc       100 Jan 26 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 05:01:58] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 03:37 run_atlas
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc       105 Jan 26 03:37 job.xml
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc 496758280 Jan 26 03:37 EVNT.48318032._000043.pool.root.1
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc    597754 Jan 26 03:37 input.tar.gz
[2026-01-26 05:01:58] drwxrwx--x 2 boinc boinc      4096 Jan 26 03:37 shared
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc     15845 Jan 26 03:37 start_atlas.sh
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc         0 Jan 26 03:37 boinc_setup_complete
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc     10169 Jan 26 03:37 init_data.xml
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc         0 Jan 26 03:37 boinc_lockfile
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc      2532 Jan 26 03:37 pandaJob.out
[2026-01-26 05:01:58] -rw------- 1 boinc boinc   1002189 Jan 26 03:37 agis_schedconf.cvmfs.json
[2026-01-26 05:01:58] -rw------- 1 boinc boinc   1516246 Jan 26 03:37 agis_ddmendpoints.agis.ALL.json
[2026-01-26 05:01:58] -rw------- 1 boinc boinc       425 Jan 26 03:37 workernode_map.json
[2026-01-26 05:01:58] drwx------ 5 boinc boinc      4096 Jan 26 03:37 pilot3
[2026-01-26 05:01:58] -rw------- 1 boinc boinc 182211266 Jan 26 05:00 HITS.48318034._001855.pool.root.1
[2026-01-26 05:01:58] -rw------- 1 boinc boinc      1035 Jan 26 05:01 memory_monitor_summary.json
[2026-01-26 05:01:58] -rw------- 1 boinc boinc    259493 Jan 26 05:01 log.48318034._001855.job.log.tgz.1
[2026-01-26 05:01:58] -rw------- 1 boinc boinc      6314 Jan 26 05:01 heartbeat.json
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc       530 Jan 26 05:01 boinc_task_state.xml
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc        27 Jan 26 05:01 wrapper_checkpoint.txt
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc      8192 Jan 26 05:01 boinc_mmap_file
[2026-01-26 05:01:58] -rw------- 1 boinc boinc        95 Jan 26 05:01 pilot_heartbeat.json
[2026-01-26 05:01:58] -rw------- 1 boinc boinc      5417 Jan 26 05:01 pilotlog.txt
[2026-01-26 05:01:58] -rw------- 1 boinc boinc    745579 Jan 26 05:01 log.48318034._001855.job.log.1
[2026-01-26 05:01:58] -rw------- 1 boinc boinc       357 Jan 26 05:01 output.list
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc       620 Jan 26 05:01 runtime_log
[2026-01-26 05:01:58] -rw------- 1 boinc boinc   1024000 Jan 26 05:01 result.tar.gz
[2026-01-26 05:01:58] -rw------- 1 boinc boinc       644 Jan 26 05:01 PNjLDmFBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3V8KDm1uueAo.diag
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc      8823 Jan 26 05:01 runtime_log.err
[2026-01-26 05:01:58] -rw-r--r-- 1 boinc boinc     21413 Jan 26 05:01 stderr.txt
[2026-01-26 05:01:58] HITS file was successfully produced:
[2026-01-26 05:01:58] -rw------- 1 boinc boinc 182211266 Jan 26 05:00 shared/HITS.pool.root.1
[2026-01-26 05:01:58]  *** Contents of shared directory: ***
[2026-01-26 05:01:58] total 664668
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc 496758280 Jan 26 03:37 ATLAS.root_0
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc    597754 Jan 26 03:37 input.tar.gz
[2026-01-26 05:01:58] -rw-r--r-- 2 boinc boinc     15845 Jan 26 03:37 start_atlas.sh
[2026-01-26 05:01:58] -rw------- 1 boinc boinc 182211266 Jan 26 05:00 HITS.pool.root.1
[2026-01-26 05:01:58] -rw------- 1 boinc boinc   1024000 Jan 26 05:01 result.tar.gz
05:01:59 (321062): run_atlas exited; CPU time 19214.700814
05:01:59 (321062): called boinc_finish(0)

</stderr_txt>
]]>

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