Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:22:57 (138451): wrapper (7.7.26015): starting
12:22:57 (138451): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 12:22:57] Arguments: --nthreads 12
[2026-01-26 12:22:57] Threads: 12
[2026-01-26 12:22:57] Checking for CVMFS
[2026-01-26 12:22:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:22:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:22:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:22:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:22:58] 2.13.3.0 3118 222 49088 155545 1 188 3016930 4096000 922 130560 0 400245 99.991 9796 687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 12:22:58] CVMFS is ok
[2026-01-26 12:22:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 12:22:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 12:22:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 12:22:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 12:22:58] Further information can be found at the LHC@home message board.
[2026-01-26 12:22:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:22:58] Checking for apptainer binary...
[2026-01-26 12:22:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:22:58] Running /usr/bin/apptainer --version
[2026-01-26 12:22:58] apptainer version 1.4.5
[2026-01-26 12:22:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:22:58] test-run
[2026-01-26 12:22:58] apptainer works
[2026-01-26 12:22:58] Set ATHENA_PROC_NUMBER=12
[2026-01-26 12:22:58] Set ATHENA_CORE_NUMBER=12
[2026-01-26 12:22:58] Starting ATLAS job with PandaID=6983467677
[2026-01-26 12:22:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/33 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:51:30]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:51:30]  mtime=0
[2026-01-26 12:51:30]  protocol_id=None
[2026-01-26 12:51:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 12:51:30]  replicas=None
[2026-01-26 12:51:30]  scope=mc23_13p6TeV
[2026-01-26 12:51:30]  status=None
[2026-01-26 12:51:30]  status_code=0
[2026-01-26 12:51:30]  storage_token=
[2026-01-26 12:51:30]  surl=/var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/log.48318034._001715.job.log.tgz.1
[2026-01-26 12:51:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/96/log.48318034._001715.job.log.tgz.1
[2026-01-26 12:51:30]  workdir=None
[2026-01-26 12:51:30] ]
[2026-01-26 12:51:30] 2026-01-26 12:51:07,276 | INFO     | transferring file log.48318034._001715.job.log.tgz.1 from /var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/log.48318034._001715.job.log.tgz.1 to /var/lib/boin
[2026-01-26 12:51:30] 2026-01-26 12:51:07,276 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/log.48318034._001715.job.log.tgz.1 /var/lib/boinc-client/slots/33/log.4831
[2026-01-26 12:51:30] 2026-01-26 12:51:07,283 | INFO     | adding to output.list: log.48318034._001715.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/96/log.48318034._001715.job.log.tg
[2026-01-26 12:51:30] 2026-01-26 12:51:07,283 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 12:51:30] 2026-01-26 12:51:07,283 | INFO     | summary of transferred files:
[2026-01-26 12:51:30] 2026-01-26 12:51:07,283 | INFO     |  -- lfn=log.48318034._001715.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 12:51:30] 2026-01-26 12:51:07,284 | INFO     | stage-out finished correctly
[2026-01-26 12:51:30] 2026-01-26 12:51:07,306 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 12:51:30] 2026-01-26 12:51:07,796 | INFO     | time since job start (1678s) is within the limit (349056.0s)
[2026-01-26 12:51:30] 2026-01-26 12:51:08,840 | INFO     | PID=142560 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 12:51:30] 2026-01-26 12:51:08,840 | INFO     | .. there are 2 such processes running
[2026-01-26 12:51:30] 2026-01-26 12:51:09,283 | WARNING  | process 147124 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 12:51:30] 2026-01-26 12:51:09,283 | INFO     | using path: /var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,299 | INFO     | number of running child processes to parent process 147124: 1
[2026-01-26 12:51:30] 2026-01-26 12:51:09,299 | INFO     | maximum number of monitored processes: 6
[2026-01-26 12:51:30] 2026-01-26 12:51:09,840 | INFO     | time since job start (1680s) is within the limit (349056.0s)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,914 | INFO     | job 6983467677 has state=finished
[2026-01-26 12:51:30] 2026-01-26 12:51:09,914 | INFO     | preparing for final server update for job 6983467677 in state='finished'
[2026-01-26 12:51:30] 2026-01-26 12:51:09,914 | INFO     | reading metadata from: /var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/jobReport.json
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/33/workernode_map.json
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | job 6983467677 has finished - writing final server update
[2026-01-26 12:51:30] 2026-01-26 12:51:09,915 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | using path: /var/lib/boinc-client/slots/33/PanDA_Pilot-6983467677/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | extracted standard info from prmon json
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | sum of square deviations: 2865170.0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | sum of deviations: -184870565.0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | mean x: 1769431120.0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,916 | INFO     | mean y: 2786513.8571428573
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | intersect: 114172532421.77283
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | chi2: 0.0437888736828758
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | current memory leak: -64.52 B/s (using 21 data points, chi2=0.04)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | ..............................
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . Timing measurements:
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . get job = 0 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . initial setup = 4 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . payload setup = 2 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . stage-in = 0 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . payload execution = 1660 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . stage-out = 0 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | . log creation = 0 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,917 | INFO     | ..............................
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | 
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | job summary report
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | --------------------------------------------------
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | PanDA job id: 6983467677
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | task id: 48318034
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | errors: (none)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | pilot state: finished 
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | transexitcode: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | exeerrorcode: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | exeerrordiag: 
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | exitcode: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | exitmsg: OK
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | cpuconsumptiontime: 15637 s
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | nevents: 400
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | neventsw: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | pid: 147124
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | pgrp: 147124
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | corecount: 12
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | event service: False
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | sizes: {0: 2284207, 11: 2284207, 1666: 2309084, 1667: 2318154, 1670: 2318292}
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | --------------------------------------------------
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | 
[2026-01-26 12:51:30] 2026-01-26 12:51:09,937 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/33
[2026-01-26 12:51:30] 2026-01-26 12:51:09,949 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | job 6983467677 has completed (purged errors)
[2026-01-26 12:51:30] 2026-01-26 12:51:09,950 | INFO     | overall cleanup function is called
[2026-01-26 12:51:30] 2026-01-26 12:51:10,957 | INFO     | --- collectZombieJob: --- 10, [147124]
[2026-01-26 12:51:30] 2026-01-26 12:51:10,957 | INFO     | zombie collector waiting for pid 147124
[2026-01-26 12:51:30] 2026-01-26 12:51:10,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:51:30] 2026-01-26 12:51:10,957 | INFO     | collected zombie processes
[2026-01-26 12:51:30] 2026-01-26 12:51:10,957 | INFO     | will attempt to kill all subprocesses of pid=147124
[2026-01-26 12:51:30] 2026-01-26 12:51:10,975 | INFO     | process IDs to be killed: [147124] (in reverse order)
[2026-01-26 12:51:30] 2026-01-26 12:51:10,988 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:51:30] 2026-01-26 12:51:10,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:51:30] 2026-01-26 12:51:10,989 | INFO     | did not find any defunct processes belonging to 147124
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | did not find any defunct processes belonging to 147124
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | ready for new job
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | **************************************
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | **************************************
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | 
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | pilot is running in a VM
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | architecture information:
[2026-01-26 12:51:30] 2026-01-26 12:51:10,990 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:51:30] 2026-01-26 12:51:10,993 | INFO     | cat /etc/os-release:
[2026-01-26 12:51:30] NAME="CentOS Linux"
[2026-01-26 12:51:30] VERSION="7 (Core)"
[2026-01-26 12:51:30] ID="centos"
[2026-01-26 12:51:30] ID_LIKE="rhel fedora"
[2026-01-26 12:51:30] VERSION_ID="7"
[2026-01-26 12:51:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:51:30] ANSI_COLOR="0;31"
[2026-01-26 12:51:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:51:30] HOME_URL="https://www.centos.org/"
[2026-01-26 12:51:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:51:30] 
[2026-01-26 12:51:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:51:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:51:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:51:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:51:30] 
[2026-01-26 12:51:30] 2026-01-26 12:51:10,993 | INFO     | **************************************
[2026-01-26 12:51:30] 2026-01-26 12:51:11,496 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/33
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | INFO     | sufficient remaining disk space (71557971968 B)
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | INFO     | update_server=False
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:51:30] 2026-01-26 12:51:11,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:51:30] 2026-01-26 12:51:11,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:51:30] 2026-01-26 12:51:11,593 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:51:30] 2026-01-26 12:51:11,802 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 12:51:30] 2026-01-26 12:51:11,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 12:51:30] 2026-01-26 12:51:11,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:51:30] 2026-01-26 12:51:11,802 | INFO     | will abort loop
[2026-01-26 12:51:30] 2026-01-26 12:51:11,959 | INFO     | all job control threads have been joined
[2026-01-26 12:51:30] 2026-01-26 12:51:12,173 | INFO     | all data control threads have been joined
[2026-01-26 12:51:30] 2026-01-26 12:51:12,503 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:12,506 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:12,522 | INFO     | all payload control threads have been joined
[2026-01-26 12:51:30] 2026-01-26 12:51:12,807 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:12,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:51:30] 2026-01-26 12:51:12,964 | INFO     | [job] control thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,146 | INFO     | [job] validate thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,178 | INFO     | [data] control thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,180 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,214 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,302 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,330 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:51:30] 2026-01-26 12:51:13,447 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,523 | INFO     | [payload] control thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:13,796 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:14,820 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:17,340 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:22,465 | INFO     | job.realtimelogging is not enabled
[2026-01-26 12:51:30] 2026-01-26 12:51:23,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:51:30] 2026-01-26 12:51:25,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134672363095872)>', '<ExcThread(monitor, started 134671509743360)>']
[2026-01-26 12:51:30] 2026-01-26 12:51:25,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:51:30] 2026-01-26 12:51:25,531 | INFO     | [monitor] control thread has ended
[2026-01-26 12:51:30] 2026-01-26 12:51:30,200 | INFO     | all workflow threads have been joined
[2026-01-26 12:51:30] 2026-01-26 12:51:30,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:51:30] 2026-01-26 12:51:30,200 | INFO     | traces error code: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:30,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:51:30] 2026-01-26 12:51:30,230 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:51:30] 2026-01-26 12:51:30,231 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:51:30] 2026-01-26 12:51:30,233 [wrapper] pilotpid: 142560
[2026-01-26 12:51:30] 2026-01-26 12:51:30,233 [wrapper] Pilot exit status: 0
[2026-01-26 12:51:30] 2026-01-26 12:51:30,238 [wrapper] pandaids: 6983467677
[2026-01-26 12:51:30] 2026-01-26 12:51:30,247 [wrapper] cleanup supervisor_pilot  151808 142561
[2026-01-26 12:51:30] 2026-01-26 12:51:30,248 [wrapper] Test setup, not cleaning
[2026-01-26 12:51:30] 2026-01-26 12:51:30,249 [wrapper] apfmon messages muted
[2026-01-26 12:51:30] 2026-01-26 12:51:30,250 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:51:30] 2026-01-26 12:51:30,251 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:51:30]  *** Error codes and diagnostics ***
[2026-01-26 12:51:30]     "exeErrorCode": 0,
[2026-01-26 12:51:30]     "exeErrorDiag": "",
[2026-01-26 12:51:30]     "pilotErrorCode": 0,
[2026-01-26 12:51:30]     "pilotErrorDiag": "",
[2026-01-26 12:51:30]  *** Listing of results directory ***
[2026-01-26 12:51:30] total 664308
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc    584422 Jan 25 22:54 pilot3.tar.gz
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc      5111 Jan 25 22:54 queuedata.json
[2026-01-26 12:51:30] -rwx------ 1 boinc boinc     36322 Jan 25 22:54 runpilot2-wrapper.sh
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc       100 Jan 26 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:51:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 12:22 run_atlas
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc       105 Jan 26 12:22 job.xml
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:22 start_atlas.sh
[2026-01-26 12:51:30] drwxrwx--x 2 boinc boinc      4096 Jan 26 12:22 shared
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc    597756 Jan 26 12:22 input.tar.gz
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc      6942 Jan 26 12:22 init_data.xml
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc 494666498 Jan 26 12:22 EVNT.48318032._000035.pool.root.1
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc         0 Jan 26 12:22 boinc_lockfile
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc      2532 Jan 26 12:22 pandaJob.out
[2026-01-26 12:51:30] -rw------- 1 boinc boinc   1002189 Jan 26 12:23 agis_schedconf.cvmfs.json
[2026-01-26 12:51:30] -rw------- 1 boinc boinc   1516246 Jan 26 12:23 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:51:30] -rw------- 1 boinc boinc       420 Jan 26 12:23 workernode_map.json
[2026-01-26 12:51:30] drwx------ 5 boinc boinc      4096 Jan 26 12:23 pilot3
[2026-01-26 12:51:30] -rw------- 1 boinc boinc        95 Jan 26 12:50 pilot_heartbeat.json
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc       530 Jan 26 12:50 boinc_task_state.xml
[2026-01-26 12:51:30] -rw------- 1 boinc boinc 180381387 Jan 26 12:50 HITS.48318034._001715.pool.root.1
[2026-01-26 12:51:30] -rw------- 1 boinc boinc      1017 Jan 26 12:51 memory_monitor_summary.json
[2026-01-26 12:51:30] -rw------- 1 boinc boinc    344236 Jan 26 12:51 log.48318034._001715.job.log.tgz.1
[2026-01-26 12:51:30] -rw------- 1 boinc boinc      6277 Jan 26 12:51 heartbeat.json
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc      8192 Jan 26 12:51 boinc_mmap_file
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc        27 Jan 26 12:51 wrapper_checkpoint.txt
[2026-01-26 12:51:30] -rw------- 1 boinc boinc      4876 Jan 26 12:51 pilotlog.txt
[2026-01-26 12:51:30] -rw------- 1 boinc boinc    287126 Jan 26 12:51 log.48318034._001715.job.log.1
[2026-01-26 12:51:30] -rw------- 1 boinc boinc       357 Jan 26 12:51 output.list
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc       620 Jan 26 12:51 runtime_log
[2026-01-26 12:51:30] -rw------- 1 boinc boinc    645120 Jan 26 12:51 result.tar.gz
[2026-01-26 12:51:30] -rw------- 1 boinc boinc       641 Jan 26 12:51 XSrLDmEBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUw1KDmPYfRln.diag
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc      8905 Jan 26 12:51 runtime_log.err
[2026-01-26 12:51:30] -rw-r--r-- 1 boinc boinc     21869 Jan 26 12:51 stderr.txt
[2026-01-26 12:51:30] HITS file was successfully produced:
[2026-01-26 12:51:30] -rw------- 1 boinc boinc 180381387 Jan 26 12:50 shared/HITS.pool.root.1
[2026-01-26 12:51:30]  *** Contents of shared directory: ***
[2026-01-26 12:51:30] total 660472
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:22 start_atlas.sh
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc    597756 Jan 26 12:22 input.tar.gz
[2026-01-26 12:51:30] -rw-r--r-- 2 boinc boinc 494666498 Jan 26 12:22 ATLAS.root_0
[2026-01-26 12:51:30] -rw------- 1 boinc boinc 180381387 Jan 26 12:50 HITS.pool.root.1
[2026-01-26 12:51:30] -rw------- 1 boinc boinc    645120 Jan 26 12:51 result.tar.gz
12:51:31 (138451): run_atlas exited; CPU time 15642.531406
12:51:31 (138451): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN