Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:54 (1679907): wrapper (7.7.26015): starting
23:07:54 (1679907): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 23:07:54] Arguments: --nthreads 2
[2026-01-26 23:07:54] Threads: 2
[2026-01-26 23:07:54] Checking for CVMFS
[2026-01-26 23:07:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 23:07:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 23:07:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 23:07:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 23:07:54] 2.9.2.0 788172 8716 62888 155562 1 50 20696963 36864000 0 130560 0 2647552 99.981 274242 7079 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 23:07:54] CVMFS is ok
[2026-01-26 23:07:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 23:07:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 23:07:54] Further information can be found at the LHC@home message board.
[2026-01-26 23:07:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 23:07:54] Checking for apptainer binary...
[2026-01-26 23:07:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 23:07:54] Running /usr/bin/apptainer --version
[2026-01-26 23:07:54] apptainer version 1.4.1-1.1
[2026-01-26 23:07:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 23:07:54] atlasA219
[2026-01-26 23:07:54] apptainer works
[2026-01-26 23:07:54] Set ATHENA_PROC_NUMBER=2
[2026-01-26 23:07:54] Set ATHENA_CORE_NUMBER=2
[2026-01-26 23:07:54] Starting ATLAS job with PandaID=6983467796
[2026-01-26 23:07:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:16:33]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:16:33] 2026-01-27 00:15:42,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:16:33] 2026-01-27 00:15:42,774 | INFO     | did not find any defunct processes belonging to 1688337
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | did not find any defunct processes belonging to 1688337
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | ready for new job
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | **************************************
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | **************************************
[2026-01-27 01:16:33] 2026-01-27 00:15:42,775 | INFO     | 
[2026-01-27 01:16:33] 2026-01-27 00:15:42,776 | INFO     | architecture information:
[2026-01-27 01:16:33] 2026-01-27 00:15:42,776 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:16:33] 2026-01-27 00:15:42,785 | INFO     | cat /etc/os-release:
[2026-01-27 01:16:33] NAME="CentOS Linux"
[2026-01-27 01:16:33] VERSION="7 (Core)"
[2026-01-27 01:16:33] ID="centos"
[2026-01-27 01:16:33] ID_LIKE="rhel fedora"
[2026-01-27 01:16:33] VERSION_ID="7"
[2026-01-27 01:16:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:16:33] ANSI_COLOR="0;31"
[2026-01-27 01:16:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:16:33] HOME_URL="https://www.centos.org/"
[2026-01-27 01:16:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:16:33] 
[2026-01-27 01:16:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:16:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:16:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:16:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:16:33] 
[2026-01-27 01:16:33] 2026-01-27 00:15:42,785 | INFO     | **************************************
[2026-01-27 01:16:33] 2026-01-27 00:15:43,289 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | INFO     | sufficient remaining disk space (188279160832 B)
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | INFO     | update_server=False
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:16:33] 2026-01-27 00:15:43,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:16:33] 2026-01-27 00:15:43,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:16:33] 2026-01-27 00:15:43,424 | INFO     | aborting loop
[2026-01-27 01:16:33] 2026-01-27 00:15:43,670 | INFO     | all payload control threads have been joined
[2026-01-27 01:16:33] 2026-01-27 00:15:44,305 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,306 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,328 | INFO     | all data control threads have been joined
[2026-01-27 01:16:33] 2026-01-27 00:15:44,358 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,428 | INFO     | all job control threads have been joined
[2026-01-27 01:16:33] 2026-01-27 00:15:44,429 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,676 | INFO     | [payload] control thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,710 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,855 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,860 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:44,920 | INFO     | [job] validate thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,229 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,296 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,302 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,334 | INFO     | [data] control thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,434 | INFO     | [job] control thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:45,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:15:47,308 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:16:33] 2026-01-27 00:16:13,221 | INFO     | PID=1683930 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:16:33] 2026-01-27 00:16:13,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:16:33] 2026-01-27 00:16:13,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:16:33] 2026-01-27 00:16:13,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:16:33] 2026-01-27 00:16:27,573 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:16:33] 2026-01-27 00:16:28,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084574377792)>', '<ExcThread(monitor, started 140083646691072)>']
[2026-01-27 01:16:33] 2026-01-27 00:16:29,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:16:33] 2026-01-27 00:16:29,301 | INFO     | [monitor] control thread has ended
[2026-01-27 01:16:33] 2026-01-27 00:16:33,840 | INFO     | all workflow threads have been joined
[2026-01-27 01:16:33] 2026-01-27 00:16:33,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:16:33] 2026-01-27 00:16:33,841 | INFO     | traces error code: 0
[2026-01-27 01:16:33] 2026-01-27 00:16:33,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:16:33] 2026-01-27 00:16:33,885 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:16:33] 2026-01-27 00:16:33,887 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:16:33] 2026-01-27 00:16:33,890 [wrapper] pilotpid: 1683930
[2026-01-27 01:16:33] 2026-01-27 00:16:33,892 [wrapper] Pilot exit status: 0
[2026-01-27 01:16:33] 2026-01-27 00:16:33,898 [wrapper] pandaids: 6983467796
[2026-01-27 01:16:33] 2026-01-27 00:16:33,912 [wrapper] cleanup supervisor_pilot 1693876 1683931
[2026-01-27 01:16:33] 2026-01-27 00:16:33,914 [wrapper] Test setup, not cleaning
[2026-01-27 01:16:33] 2026-01-27 00:16:33,917 [wrapper] apfmon messages muted
[2026-01-27 01:16:33] 2026-01-27 00:16:33,919 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:16:33] 2026-01-27 00:16:33,922 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:16:33]  *** Error codes and diagnostics ***
[2026-01-27 01:16:33]     "exeErrorCode": 0,
[2026-01-27 01:16:33]     "exeErrorDiag": "",
[2026-01-27 01:16:33]     "pilotErrorCode": 0,
[2026-01-27 01:16:33]     "pilotErrorDiag": "",
[2026-01-27 01:16:33]  *** Listing of results directory ***
[2026-01-27 01:16:33] total 679740
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:54 queuedata.json
[2026-01-27 01:16:33] -rwx------ 1 boinc boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc       100 Jan 26 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:16:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 23:07 run_atlas
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc       105 Jan 26 23:07 job.xml
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc 505677743 Jan 26 23:07 EVNT.48318032._000042.pool.root.1
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc    597756 Jan 26 23:07 input.tar.gz
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc     15845 Jan 26 23:07 start_atlas.sh
[2026-01-27 01:16:33] drwxrwx--x 2 boinc boinc      4096 Jan 26 23:07 shared
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc         0 Jan 26 23:07 boinc_setup_complete
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      6208 Jan 26 23:07 init_data.xml
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc         0 Jan 26 23:07 boinc_lockfile
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      2533 Jan 26 23:07 pandaJob.out
[2026-01-27 01:16:33] -rw------- 1 boinc boinc   1006433 Jan 26 23:08 agis_schedconf.cvmfs.json
[2026-01-27 01:16:33] -rw------- 1 boinc boinc   1516246 Jan 26 23:08 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:16:33] -rw------- 1 boinc boinc       422 Jan 26 23:08 workernode_map.json
[2026-01-27 01:16:33] drwx------ 5 boinc boinc      4096 Jan 26 23:08 pilot3
[2026-01-27 01:16:33] -rw------- 1 boinc boinc 183649814 Jan 27 01:15 HITS.48318034._001834.pool.root.1
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc       530 Jan 27 01:15 boinc_task_state.xml
[2026-01-27 01:16:33] -rw------- 1 boinc boinc      1013 Jan 27 01:15 memory_monitor_summary.json
[2026-01-27 01:16:33] -rw------- 1 boinc boinc    302504 Jan 27 01:15 log.48318034._001834.job.log.tgz.1
[2026-01-27 01:16:33] -rw------- 1 boinc boinc      6296 Jan 27 01:15 heartbeat.json
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc        27 Jan 27 01:16 wrapper_checkpoint.txt
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      8192 Jan 27 01:16 boinc_mmap_file
[2026-01-27 01:16:33] -rw------- 1 boinc boinc        95 Jan 27 01:16 pilot_heartbeat.json
[2026-01-27 01:16:33] -rw------- 1 boinc boinc      4748 Jan 27 01:16 pilotlog.txt
[2026-01-27 01:16:33] -rw------- 1 boinc boinc   1098200 Jan 27 01:16 log.48318034._001834.job.log.1
[2026-01-27 01:16:33] -rw------- 1 boinc boinc       357 Jan 27 01:16 output.list
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc       620 Jan 27 01:16 runtime_log
[2026-01-27 01:16:33] -rw------- 1 boinc boinc   1413120 Jan 27 01:16 result.tar.gz
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      8911 Jan 27 01:16 runtime_log.err
[2026-01-27 01:16:33] -rw------- 1 boinc boinc       660 Jan 27 01:16 PBPLDmFBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqV8KDmGYv8Xn.diag
[2026-01-27 01:16:33] -rw-r--r-- 1 boinc boinc      9860 Jan 27 01:16 stderr.txt
[2026-01-27 01:16:33] HITS file was successfully produced:
[2026-01-27 01:16:33] -rw------- 1 boinc boinc 183649814 Jan 27 01:15 shared/HITS.pool.root.1
[2026-01-27 01:16:33]  *** Contents of shared directory: ***
[2026-01-27 01:16:33] total 675164
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc 505677743 Jan 26 23:07 ATLAS.root_0
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc    597756 Jan 26 23:07 input.tar.gz
[2026-01-27 01:16:33] -rw-r--r-- 2 boinc boinc     15845 Jan 26 23:07 start_atlas.sh
[2026-01-27 01:16:33] -rw------- 1 boinc boinc 183649814 Jan 27 01:15 HITS.pool.root.1
[2026-01-27 01:16:33] -rw------- 1 boinc boinc   1413120 Jan 27 01:16 result.tar.gz
01:16:56 (1679907): run_atlas exited; CPU time 14883.862250
01:16:56 (1679907): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN