Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:28:05 (2894): wrapper (7.7.26015): starting
18:28:05 (2894): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:28:05] Arguments: --nthreads 8
[2026-01-26 18:28:05] Threads: 8
[2026-01-26 18:28:05] Checking for CVMFS
[2026-01-26 18:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:28:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:28:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:28:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:28:09] 2.11.2.0 21086 60193 133996 155555 1 57 23294601 25165825 4016 130560 0 21064359 99.823 15697550 2864 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 18:28:09] CVMFS is ok
[2026-01-26 18:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:28:09] Checking for apptainer binary...
[2026-01-26 18:28:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:28:09] Running /usr/bin/apptainer --version
[2026-01-26 18:28:09] apptainer version 1.3.2-1.el7
[2026-01-26 18:28:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:28:33] cg-vwn408.simple-grid.lan
[2026-01-26 18:28:33] apptainer works
[2026-01-26 18:28:33] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:28:33] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:28:33] Starting ATLAS job with PandaID=6983467735
[2026-01-26 18:28:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:19:39]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:19:39] 2026-01-26 21:18:31,245 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,248 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6983467735/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,248 | INFO     | extracted standard info from prmon json
[2026-01-26 22:19:39] 2026-01-26 21:18:31,248 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:19:39] 2026-01-26 21:18:31,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:19:39] 2026-01-26 21:18:31,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:19:39] 2026-01-26 21:18:31,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:19:39] 2026-01-26 21:18:31,253 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:19:39] 2026-01-26 21:18:31,254 | INFO     | sum of square deviations: 3168461268.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,255 | INFO     | sum of deviations: 41193119135.00002
[2026-01-26 22:19:39] 2026-01-26 21:18:31,256 | INFO     | mean x: 1769455704.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,256 | INFO     | mean y: 2463410.465437788
[2026-01-26 22:19:39] 2026-01-26 21:18:31,256 | INFO     | intersect: -23002204614.082222
[2026-01-26 22:19:39] 2026-01-26 21:18:31,256 | INFO     | chi2: 5.612435972679634
[2026-01-26 22:19:39] 2026-01-26 21:18:31,257 | INFO     | sum of square deviations: 2954447953.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,258 | INFO     | sum of deviations: 54567570862.00002
[2026-01-26 22:19:39] 2026-01-26 21:18:31,259 | INFO     | mean x: 1769455551.5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,259 | INFO     | mean y: 2472749.2924528304
[2026-01-26 22:19:39] 2026-01-26 21:18:31,259 | INFO     | intersect: -32678722766.638702
[2026-01-26 22:19:39] 2026-01-26 21:18:31,259 | INFO     | chi2: 4.8917661154394905
[2026-01-26 22:19:39] 2026-01-26 21:18:31,259 | INFO     | current chi2=4.8917661154394905 (change=12.840589375954394 %)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,260 | INFO     | right removable region: 211
[2026-01-26 22:19:39] 2026-01-26 21:18:31,260 | INFO     | sum of square deviations: 2954447953.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | sum of deviations: -29561535557.000004
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | mean x: 1769455856.5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | mean y: 2513751.650943396
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | intersect: 17707287384.692043
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | chi2: 1.4368808301836755
[2026-01-26 22:19:39] 2026-01-26 21:18:31,262 | INFO     | current chi2=1.4368808301836755 (change=74.39826775435547 %)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,263 | INFO     | sum of square deviations: 2750295288.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,265 | INFO     | sum of deviations: -46886235898.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,265 | INFO     | mean x: 1769456009.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,265 | INFO     | mean y: 2526554.202898551
[2026-01-26 22:19:39] 2026-01-26 21:18:31,265 | INFO     | intersect: 30167699076.255234
[2026-01-26 22:19:39] 2026-01-26 21:18:31,266 | INFO     | chi2: 0.9762952469499558
[2026-01-26 22:19:39] 2026-01-26 21:18:31,266 | INFO     | current chi2=0.9762952469499558 (change=32.05454297659767 %)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,266 | INFO     | sum of square deviations: 2555770710.5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | sum of deviations: -42783534833.5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | mean x: 1769456161.5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | mean y: 2523305.925742574
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | intersect: 29623173159.55683
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | chi2: 0.9644652820396855
[2026-01-26 22:19:39] 2026-01-26 21:18:31,268 | INFO     | current chi2=0.9644652820396855 (change=1.2117200147422948 %)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,269 | INFO     | left removable region: 30
[2026-01-26 22:19:39] 2026-01-26 21:18:31,269 | INFO     | sum of square deviations: 1838657730.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,270 | INFO     | sum of deviations: -8170479385.000004
[2026-01-26 22:19:39] 2026-01-26 21:18:31,271 | INFO     | mean x: 1769456436.0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,271 | INFO     | mean y: 2516283.7458563535
[2026-01-26 22:19:39] 2026-01-26 21:18:31,271 | INFO     | intersect: 7865484522.534692
[2026-01-26 22:19:39] 2026-01-26 21:18:31,272 | INFO     | chi2: 0.09730632386230315
[2026-01-26 22:19:39] 2026-01-26 21:18:31,272 | INFO     | current memory leak: -4.44 B/s (using 181 data points, chi2=0.10)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | ..............................
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | . Timing measurements:
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | . get job = 0 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | . initial setup = 104 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,273 | INFO     | . payload setup = 124 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,274 | INFO     | . stage-in = 0 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,274 | INFO     | . payload execution = 13312 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,274 | INFO     | . stage-out = 1 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,274 | INFO     | . log creation = 0 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,274 | INFO     | ..............................
[2026-01-26 22:19:39] 2026-01-26 21:18:31,388 | INFO     | 
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | job summary report
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | --------------------------------------------------
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | PanDA job id: 6983467735
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | task id: 48318034
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | errors: (none)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | pilot state: finished 
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | transexitcode: 0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,389 | INFO     | exeerrorcode: 0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | exeerrordiag: 
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | exitcode: 0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | exitmsg: OK
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | cpuconsumptiontime: 56619 s
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | nevents: 400
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | neventsw: 0
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | pid: 11589
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | pgrp: 11589
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | corecount: 8
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | event service: False
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | sizes: {0: 2283109, 1: 2283794, 2: 2284255, 12: 2284255, 13440: 2314383, 13441: 2314382, 13442: 2323564, 13446: 2323620, 13449: 2323814}
[2026-01-26 22:19:39] 2026-01-26 21:18:31,390 | INFO     | --------------------------------------------------
[2026-01-26 22:19:39] 2026-01-26 21:18:31,391 | INFO     | 
[2026-01-26 22:19:39] 2026-01-26 21:18:31,391 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-26 22:19:39] 2026-01-26 21:18:31,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | job 6983467735 has completed (purged errors)
[2026-01-26 22:19:39] 2026-01-26 21:18:31,458 | INFO     | overall cleanup function is called
[2026-01-26 22:19:39] 2026-01-26 21:18:32,466 | INFO     | --- collectZombieJob: --- 10, [11589]
[2026-01-26 22:19:39] 2026-01-26 21:18:32,467 | INFO     | zombie collector waiting for pid 11589
[2026-01-26 22:19:39] 2026-01-26 21:18:32,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:19:39] 2026-01-26 21:18:32,467 | INFO     | collected zombie processes
[2026-01-26 22:19:39] 2026-01-26 21:18:32,467 | INFO     | will attempt to kill all subprocesses of pid=11589
[2026-01-26 22:19:39] 2026-01-26 21:18:32,535 | INFO     | process IDs to be killed: [11589] (in reverse order)
[2026-01-26 22:19:39] 2026-01-26 21:18:32,593 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:19:39] 2026-01-26 21:18:32,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:19:39] 2026-01-26 21:18:32,595 | INFO     | did not find any defunct processes belonging to 11589
[2026-01-26 22:19:39] 2026-01-26 21:18:32,597 | INFO     | did not find any defunct processes belonging to 11589
[2026-01-26 22:19:39] 2026-01-26 21:18:32,598 | INFO     | ready for new job
[2026-01-26 22:19:39] 2026-01-26 21:18:32,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:19:39] 2026-01-26 21:18:32,600 | INFO     | **************************************
[2026-01-26 22:19:39] 2026-01-26 21:18:32,600 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:19:39] 2026-01-26 21:18:32,600 | INFO     | **************************************
[2026-01-26 22:19:39] 2026-01-26 21:18:32,600 | INFO     | 
[2026-01-26 22:19:39] 2026-01-26 21:18:32,601 | INFO     | pilot is running in a VM
[2026-01-26 22:19:39] 2026-01-26 21:18:32,601 | INFO     | architecture information:
[2026-01-26 22:19:39] 2026-01-26 21:18:32,602 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:19:39] 2026-01-26 21:18:32,634 | INFO     | cat /etc/os-release:
[2026-01-26 22:19:39] NAME="CentOS Linux"
[2026-01-26 22:19:39] VERSION="7 (Core)"
[2026-01-26 22:19:39] ID="centos"
[2026-01-26 22:19:39] ID_LIKE="rhel fedora"
[2026-01-26 22:19:39] VERSION_ID="7"
[2026-01-26 22:19:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:19:39] ANSI_COLOR="0;31"
[2026-01-26 22:19:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:19:39] HOME_URL="https://www.centos.org/"
[2026-01-26 22:19:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:19:39] 
[2026-01-26 22:19:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:19:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:19:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:19:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:19:39] 
[2026-01-26 22:19:39] 2026-01-26 21:18:32,635 | INFO     | **************************************
[2026-01-26 22:19:39] 2026-01-26 21:18:33,138 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-26 22:19:39] 2026-01-26 21:18:33,159 | INFO     | sufficient remaining disk space (497043898368 B)
[2026-01-26 22:19:39] 2026-01-26 21:18:33,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:19:39] 2026-01-26 21:18:33,160 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:19:39] 2026-01-26 21:18:33,160 | INFO     | update_server=False
[2026-01-26 22:19:39] 2026-01-26 21:18:33,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:19:39] 2026-01-26 21:18:33,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:19:39] 2026-01-26 21:18:33,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:19:39] 2026-01-26 21:18:33,514 | INFO     | all data control threads have been joined
[2026-01-26 22:19:39] 2026-01-26 21:18:33,584 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 22:19:39] 2026-01-26 21:18:33,585 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 22:19:39] 2026-01-26 21:18:33,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:19:39] 2026-01-26 21:18:33,585 | INFO     | will abort loop
[2026-01-26 22:19:39] 2026-01-26 21:18:34,166 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,167 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,202 | INFO     | all payload control threads have been joined
[2026-01-26 22:19:39] 2026-01-26 21:18:34,359 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:19:39] 2026-01-26 21:18:34,520 | INFO     | [data] control thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,551 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,591 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,843 | INFO     | [job] validate thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,859 | INFO     | all job control threads have been joined
[2026-01-26 22:19:39] 2026-01-26 21:18:34,886 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:34,978 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,167 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,207 | INFO     | [payload] control thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,381 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,542 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,630 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:35,864 | INFO     | [job] control thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:18:38,400 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:19:39] 2026-01-26 21:19:03,188 | INFO     | PID=7112 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 22:19:39] 2026-01-26 21:19:03,188 | INFO     | .. there are 2 such processes running
[2026-01-26 22:19:39] 2026-01-26 21:19:03,188 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:19:39] 2026-01-26 21:19:03,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:19:39] 2026-01-26 21:19:03,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:19:39] 2026-01-26 21:19:32,964 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:19:39] 2026-01-26 21:19:33,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773263021888)>', '<ExcThread(monitor, started 139772966188800)>']
[2026-01-26 22:19:39] 2026-01-26 21:19:34,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:19:39] 2026-01-26 21:19:34,338 | INFO     | [monitor] control thread has ended
[2026-01-26 22:19:39] 2026-01-26 21:19:38,733 | INFO     | all workflow threads have been joined
[2026-01-26 22:19:39] 2026-01-26 21:19:38,733 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:19:39] 2026-01-26 21:19:38,734 | INFO     | traces error code: 0
[2026-01-26 22:19:39] 2026-01-26 21:19:38,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:19:39] 2026-01-26 21:19:38,905 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:19:39] 2026-01-26 21:19:38,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:19:39] 2026-01-26 21:19:38,916 [wrapper] pilotpid: 7112
[2026-01-26 22:19:39] 2026-01-26 21:19:38,925 [wrapper] Pilot exit status: 0
[2026-01-26 22:19:39] 2026-01-26 21:19:38,955 [wrapper] pandaids: 6983467735
[2026-01-26 22:19:39] 2026-01-26 21:19:39,006 [wrapper] cleanup supervisor_pilot 20380 7113
[2026-01-26 22:19:39] 2026-01-26 21:19:39,019 [wrapper] Test setup, not cleaning
[2026-01-26 22:19:39] 2026-01-26 21:19:39,025 [wrapper] apfmon messages muted
[2026-01-26 22:19:39] 2026-01-26 21:19:39,030 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:19:39] 2026-01-26 21:19:39,034 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:19:39]  *** Error codes and diagnostics ***
[2026-01-26 22:19:39]     "exeErrorCode": 0,
[2026-01-26 22:19:39]     "exeErrorDiag": "",
[2026-01-26 22:19:39]     "pilotErrorCode": 0,
[2026-01-26 22:19:39]     "pilotErrorDiag": "",
[2026-01-26 22:19:39]  *** Listing of results directory ***
[2026-01-26 22:19:39] total 670040
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc      5111 Jan 25 23:54 queuedata.json
[2026-01-26 22:19:39] -rwx------. 1 boinc boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc       100 Jan 26 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:19:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 18:28 run_atlas
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc       105 Jan 26 18:28 job.xml
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc 493821854 Jan 26 18:28 EVNT.48318032._000040.pool.root.1
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:28 start_atlas.sh
[2026-01-26 22:19:39] drwxrwx--x. 2 boinc boinc        68 Jan 26 18:28 shared
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc    597761 Jan 26 18:28 input.tar.gz
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc      6391 Jan 26 18:28 init_data.xml
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc         0 Jan 26 18:28 boinc_lockfile
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc      2532 Jan 26 18:28 pandaJob.out
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc       415 Jan 26 18:34 workernode_map.json
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc   1006384 Jan 26 18:34 agis_schedconf.cvmfs.json
[2026-01-26 22:19:39] drwx------. 5 boinc boinc      4096 Jan 26 18:34 pilot3
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc 183677170 Jan 26 22:17 HITS.48318034._001773.pool.root.1
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc       532 Jan 26 22:17 boinc_task_state.xml
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc      1034 Jan 26 22:18 memory_monitor_summary.json
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc        95 Jan 26 22:18 pilot_heartbeat.json
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc   1516246 Jan 26 22:18 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc    463138 Jan 26 22:18 log.48318034._001773.job.log.tgz.1
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc      6325 Jan 26 22:18 heartbeat.json
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc        28 Jan 26 22:19 wrapper_checkpoint.txt
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc      8192 Jan 26 22:19 boinc_mmap_file
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc      5065 Jan 26 22:19 pilotlog.txt
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc   1884002 Jan 26 22:19 log.48318034._001773.job.log.1
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc       357 Jan 26 22:19 output.list
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc       620 Jan 26 22:19 runtime_log
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc   2365440 Jan 26 22:19 result.tar.gz
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc      8816 Jan 26 22:19 runtime_log.err
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc       655 Jan 26 22:19 iCpNDmEBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHx1KDm3CkZnn.diag
[2026-01-26 22:19:39] -rw-r--r--. 1 boinc boinc     20739 Jan 26 22:19 stderr.txt
[2026-01-26 22:19:39] HITS file was successfully produced:
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc 183677170 Jan 26 22:17 shared/HITS.pool.root.1
[2026-01-26 22:19:39]  *** Contents of shared directory: ***
[2026-01-26 22:19:39] total 664536
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc 493821854 Jan 26 18:28 ATLAS.root_0
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:28 start_atlas.sh
[2026-01-26 22:19:39] -rw-r--r--. 2 boinc boinc    597761 Jan 26 18:28 input.tar.gz
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc 183677170 Jan 26 22:17 HITS.pool.root.1
[2026-01-26 22:19:39] -rw-------. 1 boinc boinc   2365440 Jan 26 22:19 result.tar.gz
22:19:40 (2894): run_atlas exited; CPU time 56825.254242
22:19:40 (2894): called boinc_finish(0)

</stderr_txt>
]]>

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