Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:26 (3382014): wrapper (7.7.26015): starting
16:09:26 (3382014): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 16:09:26] Arguments: --nthreads 3
[2026-01-26 16:09:26] Threads: 3
[2026-01-26 16:09:26] Checking for CVMFS
[2026-01-26 16:09:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:09:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:09:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:09:27] 2.9.2.0 2096296 8576 85884 155550 2 49 34302665 36864001 0 130560 0 3497195 99.985 271878 5767 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 16:09:27] CVMFS is ok
[2026-01-26 16:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:09:27] Further information can be found at the LHC@home message board.
[2026-01-26 16:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:09:27] Checking for apptainer binary...
[2026-01-26 16:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:09:27] Running /usr/bin/apptainer --version
[2026-01-26 16:09:27] apptainer version 1.4.1-1.1
[2026-01-26 16:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:09:27] atlasA212
[2026-01-26 16:09:27] apptainer works
[2026-01-26 16:09:27] Set ATHENA_PROC_NUMBER=3
[2026-01-26 16:09:27] Set ATHENA_CORE_NUMBER=3
[2026-01-26 16:09:27] Starting ATLAS job with PandaID=6983772835
[2026-01-26 16:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:50:53]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:50:53]  filetype=log
[2026-01-26 17:50:53]  guid=57baa651-b7fe-4b96-a2e7-3df14133af82
[2026-01-26 17:50:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 17:50:53]  is_altstaged=None
[2026-01-26 17:50:53]  is_tar=False
[2026-01-26 17:50:53]  lfn=log.48318042._001959.job.log.tgz.1
[2026-01-26 17:50:53]  mtime=0
[2026-01-26 17:50:53]  protocol_id=None
[2026-01-26 17:50:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:50:53]  replicas=None
[2026-01-26 17:50:53]  scope=mc23_13p6TeV
[2026-01-26 17:50:53]  status=None
[2026-01-26 17:50:53]  status_code=0
[2026-01-26 17:50:53]  storage_token=
[2026-01-26 17:50:53]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983772835/log.48318042._001959.job.log.tgz.1
[2026-01-26 17:50:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/58/log.48318042._001959.job.log.tgz.1
[2026-01-26 17:50:53]  workdir=None
[2026-01-26 17:50:53] ]
[2026-01-26 17:50:53] 2026-01-26 16:50:08,977 | INFO     | transferring file log.48318042._001959.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983772835/log.48318042._001959.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 17:50:53] 2026-01-26 16:50:08,977 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983772835/log.48318042._001959.job.log.tgz.1 /local/data/boinc/slots/0/log.48318042._0019
[2026-01-26 17:50:53] 2026-01-26 16:50:08,994 | INFO     | adding to output.list: log.48318042._001959.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/58/log.48318042._001959.job.log.tg
[2026-01-26 17:50:53] 2026-01-26 16:50:08,994 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:50:53] 2026-01-26 16:50:08,994 | INFO     | summary of transferred files:
[2026-01-26 17:50:53] 2026-01-26 16:50:08,994 | INFO     |  -- lfn=log.48318042._001959.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:50:53] 2026-01-26 16:50:08,994 | INFO     | stage-out finished correctly
[2026-01-26 17:50:53] 2026-01-26 16:50:09,029 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:50:53] 2026-01-26 16:50:10,025 | INFO     | time since job start (6033s) is within the limit (349056.0s)
[2026-01-26 17:50:53] 2026-01-26 16:50:10,695 | WARNING  | process 3390479 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:50:53] 2026-01-26 16:50:10,695 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983772835/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:50:53] 2026-01-26 16:50:10,750 | INFO     | number of running child processes to parent process 3390479: 1
[2026-01-26 17:50:53] 2026-01-26 16:50:10,750 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:50:53] 2026-01-26 16:50:11,594 | INFO     | job 6983772835 has state=finished
[2026-01-26 17:50:53] 2026-01-26 16:50:11,594 | INFO     | preparing for final server update for job 6983772835 in state='finished'
[2026-01-26 17:50:53] 2026-01-26 16:50:11,594 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983772835/jobReport.json
[2026-01-26 17:50:53] 2026-01-26 16:50:11,595 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 17:50:53] 2026-01-26 16:50:11,596 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,596 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,596 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:50:53] 2026-01-26 16:50:11,596 | INFO     | job 6983772835 has finished - writing final server update
[2026-01-26 17:50:53] 2026-01-26 16:50:11,596 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983772835/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | INFO     | extracted standard info from prmon json
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:50:53] 2026-01-26 16:50:11,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:50:53] 2026-01-26 16:50:11,598 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:50:53] 2026-01-26 16:50:11,598 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,598 | INFO     | sum of deviations: -528460628.99999976
[2026-01-26 17:50:53] 2026-01-26 16:50:11,598 | INFO     | mean x: 1769443275.5
[2026-01-26 17:50:53] 2026-01-26 16:50:11,598 | INFO     | mean y: 2343872.1304347827
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | intersect: 3875443690.078432
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | chi2: 0.027161610769936943
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | current memory leak: -2.19 B/s (using 92 data points, chi2=0.03)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | could have reported an average CPU frequency of 4406 MHz (7 samples)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | ..............................
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . Timing measurements:
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . get job = 0 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . initial setup = 3 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . payload setup = 3 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . stage-in = 0 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . payload execution = 6012 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . stage-out = 0 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | . log creation = 0 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,599 | INFO     | ..............................
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | 
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | job summary report
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | --------------------------------------------------
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | PanDA job id: 6983772835
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | task id: 48318042
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | errors: (none)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | pilot state: finished 
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | transexitcode: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | exeerrorcode: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | exeerrordiag: 
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | exitcode: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | exitmsg: OK
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | cpuconsumptiontime: 17390 s
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | nevents: 400
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | neventsw: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | pid: 3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | pgrp: 3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | corecount: 3
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | event service: False
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | sizes: {0: 2284254, 10: 2284254, 6020: 2311115, 6021: 2320175, 6023: 2320313}
[2026-01-26 17:50:53] 2026-01-26 16:50:11,631 | INFO     | --------------------------------------------------
[2026-01-26 17:50:53] 2026-01-26 16:50:11,632 | INFO     | 
[2026-01-26 17:50:53] 2026-01-26 16:50:11,632 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | job 6983772835 has completed (purged errors)
[2026-01-26 17:50:53] 2026-01-26 16:50:11,648 | INFO     | overall cleanup function is called
[2026-01-26 17:50:53] 2026-01-26 16:50:12,654 | INFO     | --- collectZombieJob: --- 10, [3390479]
[2026-01-26 17:50:53] 2026-01-26 16:50:12,654 | INFO     | zombie collector waiting for pid 3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:12,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:50:53] 2026-01-26 16:50:12,654 | INFO     | collected zombie processes
[2026-01-26 17:50:53] 2026-01-26 16:50:12,654 | INFO     | will attempt to kill all subprocesses of pid=3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:12,710 | INFO     | process IDs to be killed: [3390479] (in reverse order)
[2026-01-26 17:50:53] 2026-01-26 16:50:12,742 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:50:53] 2026-01-26 16:50:12,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:50:53] 2026-01-26 16:50:12,744 | INFO     | did not find any defunct processes belonging to 3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:12,746 | INFO     | did not find any defunct processes belonging to 3390479
[2026-01-26 17:50:53] 2026-01-26 16:50:12,746 | INFO     | ready for new job
[2026-01-26 17:50:53] 2026-01-26 16:50:12,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:50:53] 2026-01-26 16:50:12,747 | INFO     | **************************************
[2026-01-26 17:50:53] 2026-01-26 16:50:12,747 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:50:53] 2026-01-26 16:50:12,747 | INFO     | **************************************
[2026-01-26 17:50:53] 2026-01-26 16:50:12,747 | INFO     | 
[2026-01-26 17:50:53] 2026-01-26 16:50:12,747 | INFO     | architecture information:
[2026-01-26 17:50:53] 2026-01-26 16:50:12,748 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:50:53] 2026-01-26 16:50:12,759 | INFO     | cat /etc/os-release:
[2026-01-26 17:50:53] NAME="CentOS Linux"
[2026-01-26 17:50:53] VERSION="7 (Core)"
[2026-01-26 17:50:53] ID="centos"
[2026-01-26 17:50:53] ID_LIKE="rhel fedora"
[2026-01-26 17:50:53] VERSION_ID="7"
[2026-01-26 17:50:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:50:53] ANSI_COLOR="0;31"
[2026-01-26 17:50:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:50:53] HOME_URL="https://www.centos.org/"
[2026-01-26 17:50:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:50:53] 
[2026-01-26 17:50:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:50:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:50:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:50:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:50:53] 
[2026-01-26 17:50:53] 2026-01-26 16:50:12,759 | INFO     | **************************************
[2026-01-26 17:50:53] 2026-01-26 16:50:13,261 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 17:50:53] 2026-01-26 16:50:13,273 | INFO     | sufficient remaining disk space (367866675200 B)
[2026-01-26 17:50:53] 2026-01-26 16:50:13,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:50:53] 2026-01-26 16:50:13,274 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:50:53] 2026-01-26 16:50:13,274 | INFO     | update_server=False
[2026-01-26 17:50:53] 2026-01-26 16:50:13,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:50:53] 2026-01-26 16:50:13,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:50:53] 2026-01-26 16:50:13,772 | INFO     | all payload control threads have been joined
[2026-01-26 17:50:53] 2026-01-26 16:50:13,848 | INFO     | all data control threads have been joined
[2026-01-26 17:50:53] 2026-01-26 16:50:14,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:50:53] 2026-01-26 16:50:14,258 | INFO     | aborting loop
[2026-01-26 17:50:53] 2026-01-26 16:50:14,279 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:14,279 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:14,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:50:53] 2026-01-26 16:50:14,703 | INFO     | all job control threads have been joined
[2026-01-26 17:50:53] 2026-01-26 16:50:14,777 | INFO     | [payload] control thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:14,853 | INFO     | [data] control thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:50:53] 2026-01-26 16:50:15,071 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,263 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,489 | INFO     | [job] validate thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,578 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,607 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,654 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,708 | INFO     | [job] control thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:15,776 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:16,540 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:19,071 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:24,057 | INFO     | job.realtimelogging is not enabled
[2026-01-26 17:50:53] 2026-01-26 16:50:25,062 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:50:53] 2026-01-26 16:50:43,159 | INFO     | PID=3386050 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:50:53] 2026-01-26 16:50:43,160 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:50:53] 2026-01-26 16:50:43,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:50:53] 2026-01-26 16:50:43,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:50:53] 2026-01-26 16:50:47,132 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:50:53] 2026-01-26 16:50:48,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716337538880)>', '<ExcThread(monitor, started 139715386783488)>']
[2026-01-26 17:50:53] 2026-01-26 16:50:49,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:50:53] 2026-01-26 16:50:49,189 | INFO     | [monitor] control thread has ended
[2026-01-26 17:50:53] 2026-01-26 16:50:53,369 | INFO     | all workflow threads have been joined
[2026-01-26 17:50:53] 2026-01-26 16:50:53,369 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:50:53] 2026-01-26 16:50:53,369 | INFO     | traces error code: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:53,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:50:53] 2026-01-26 16:50:53,432 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:50:53] 2026-01-26 16:50:53,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:50:53] 2026-01-26 16:50:53,438 [wrapper] pilotpid: 3386050
[2026-01-26 17:50:53] 2026-01-26 16:50:53,441 [wrapper] Pilot exit status: 0
[2026-01-26 17:50:53] 2026-01-26 16:50:53,450 [wrapper] pandaids: 6983772835
[2026-01-26 17:50:53] 2026-01-26 16:50:53,472 [wrapper] cleanup supervisor_pilot 3396218 3386051
[2026-01-26 17:50:53] 2026-01-26 16:50:53,475 [wrapper] Test setup, not cleaning
[2026-01-26 17:50:53] 2026-01-26 16:50:53,478 [wrapper] apfmon messages muted
[2026-01-26 17:50:53] 2026-01-26 16:50:53,481 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:50:53] 2026-01-26 16:50:53,484 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:50:53]  *** Error codes and diagnostics ***
[2026-01-26 17:50:53]     "exeErrorCode": 0,
[2026-01-26 17:50:53]     "exeErrorDiag": "",
[2026-01-26 17:50:53]     "pilotErrorCode": 0,
[2026-01-26 17:50:53]     "pilotErrorDiag": "",
[2026-01-26 17:50:53]  *** Listing of results directory ***
[2026-01-26 17:50:53] total 676972
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-26 17:50:53] -rwx------ 1 boinc boinc     36322 Jan 26 04:19 runpilot2-wrapper.sh
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:21 queuedata.json
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:50:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:09 run_atlas
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:09 job.xml
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc 504861404 Jan 26 16:09 EVNT.48318040._000039.pool.root.1
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc    597772 Jan 26 16:09 input.tar.gz
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:09 start_atlas.sh
[2026-01-26 17:50:53] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:09 shared
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:09 boinc_setup_complete
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc      6448 Jan 26 16:09 init_data.xml
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:09 boinc_lockfile
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc      2533 Jan 26 16:09 pandaJob.out
[2026-01-26 17:50:53] -rw------- 1 boinc boinc   1002189 Jan 26 16:09 agis_schedconf.cvmfs.json
[2026-01-26 17:50:53] -rw------- 1 boinc boinc   1516246 Jan 26 16:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:50:53] -rw------- 1 boinc boinc       425 Jan 26 16:09 workernode_map.json
[2026-01-26 17:50:53] drwx------ 5 boinc boinc      4096 Jan 26 16:09 pilot3
[2026-01-26 17:50:53] -rw------- 1 boinc boinc 182075311 Jan 26 17:49 HITS.48318042._001959.pool.root.1
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc       530 Jan 26 17:49 boinc_task_state.xml
[2026-01-26 17:50:53] -rw------- 1 boinc boinc      1015 Jan 26 17:50 memory_monitor_summary.json
[2026-01-26 17:50:53] -rw------- 1 boinc boinc    300122 Jan 26 17:50 log.48318042._001959.job.log.tgz.1
[2026-01-26 17:50:53] -rw------- 1 boinc boinc        95 Jan 26 17:50 pilot_heartbeat.json
[2026-01-26 17:50:53] -rw------- 1 boinc boinc      6296 Jan 26 17:50 heartbeat.json
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc        27 Jan 26 17:50 wrapper_checkpoint.txt
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc      8192 Jan 26 17:50 boinc_mmap_file
[2026-01-26 17:50:53] -rw------- 1 boinc boinc      4820 Jan 26 17:50 pilotlog.txt
[2026-01-26 17:50:53] -rw------- 1 boinc boinc    872975 Jan 26 17:50 log.48318042._001959.job.log.1
[2026-01-26 17:50:53] -rw------- 1 boinc boinc       357 Jan 26 17:50 output.list
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc       620 Jan 26 17:50 runtime_log
[2026-01-26 17:50:53] -rw------- 1 boinc boinc   1187840 Jan 26 17:50 result.tar.gz
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc      8911 Jan 26 17:50 runtime_log.err
[2026-01-26 17:50:53] -rw------- 1 boinc boinc       662 Jan 26 17:50 JnfNDm2JS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0S2KDm8WxCVn.diag
[2026-01-26 17:50:53] -rw-r--r-- 1 boinc boinc     21298 Jan 26 17:50 stderr.txt
[2026-01-26 17:50:53] HITS file was successfully produced:
[2026-01-26 17:50:53] -rw------- 1 boinc boinc 182075311 Jan 26 17:49 shared/HITS.pool.root.1
[2026-01-26 17:50:53]  *** Contents of shared directory: ***
[2026-01-26 17:50:53] total 672608
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc 504861404 Jan 26 16:09 ATLAS.root_0
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc    597772 Jan 26 16:09 input.tar.gz
[2026-01-26 17:50:53] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:09 start_atlas.sh
[2026-01-26 17:50:53] -rw------- 1 boinc boinc 182075311 Jan 26 17:49 HITS.pool.root.1
[2026-01-26 17:50:53] -rw------- 1 boinc boinc   1187840 Jan 26 17:50 result.tar.gz
17:50:55 (3382014): run_atlas exited; CPU time 17419.696894
17:50:55 (3382014): called boinc_finish(0)

</stderr_txt>
]]>

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