Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:17:13 (1596711): wrapper (7.7.26015): starting
19:17:13 (1596711): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 19:17:13] Arguments: --nthreads 4
[2026-01-26 19:17:13] Threads: 4
[2026-01-26 19:17:13] Checking for CVMFS
[2026-01-26 19:17:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:17:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:17:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:17:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:17:14] 2.9.2.0 41542 8801 110664 155556 3 9 22663188 36864000 0 130560 0 4397619 99.988 280391 6438 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 19:17:14] CVMFS is ok
[2026-01-26 19:17:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:17:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:17:14] Further information can be found at the LHC@home message board.
[2026-01-26 19:17:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:17:14] Checking for apptainer binary...
[2026-01-26 19:17:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:17:14] Running /usr/bin/apptainer --version
[2026-01-26 19:17:14] apptainer version 1.4.1-1.1
[2026-01-26 19:17:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:17:14] thA332a
[2026-01-26 19:17:14] apptainer works
[2026-01-26 19:17:14] Set ATHENA_PROC_NUMBER=4
[2026-01-26 19:17:14] Set ATHENA_CORE_NUMBER=4
[2026-01-26 19:17:14] Starting ATLAS job with PandaID=6983772067
[2026-01-26 19:17:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:35:51]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:35:51] 2026-01-26 19:35:20,651 | INFO     | will attempt to kill all subprocesses of pid=1605355
[2026-01-26 20:35:51] 2026-01-26 19:35:20,696 | INFO     | process IDs to be killed: [1605355] (in reverse order)
[2026-01-26 20:35:51] 2026-01-26 19:35:20,730 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:35:51] 2026-01-26 19:35:20,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:35:51] 2026-01-26 19:35:20,732 | INFO     | did not find any defunct processes belonging to 1605355
[2026-01-26 20:35:51] 2026-01-26 19:35:20,733 | INFO     | did not find any defunct processes belonging to 1605355
[2026-01-26 20:35:51] 2026-01-26 19:35:20,733 | INFO     | ready for new job
[2026-01-26 20:35:51] 2026-01-26 19:35:20,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:35:51] 2026-01-26 19:35:20,734 | INFO     | **************************************
[2026-01-26 20:35:51] 2026-01-26 19:35:20,734 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:35:51] 2026-01-26 19:35:20,734 | INFO     | **************************************
[2026-01-26 20:35:51] 2026-01-26 19:35:20,734 | INFO     | 
[2026-01-26 20:35:51] 2026-01-26 19:35:20,734 | INFO     | architecture information:
[2026-01-26 20:35:51] 2026-01-26 19:35:20,735 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:35:51] 2026-01-26 19:35:20,750 | INFO     | cat /etc/os-release:
[2026-01-26 20:35:51] NAME="CentOS Linux"
[2026-01-26 20:35:51] VERSION="7 (Core)"
[2026-01-26 20:35:51] ID="centos"
[2026-01-26 20:35:51] ID_LIKE="rhel fedora"
[2026-01-26 20:35:51] VERSION_ID="7"
[2026-01-26 20:35:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:35:51] ANSI_COLOR="0;31"
[2026-01-26 20:35:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:35:51] HOME_URL="https://www.centos.org/"
[2026-01-26 20:35:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:35:51] 
[2026-01-26 20:35:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:35:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:35:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:35:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:35:51] 
[2026-01-26 20:35:51] 2026-01-26 19:35:20,750 | INFO     | **************************************
[2026-01-26 20:35:51] 2026-01-26 19:35:21,253 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | INFO     | sufficient remaining disk space (334475821056 B)
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | INFO     | update_server=False
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:35:51] 2026-01-26 19:35:21,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:35:51] 2026-01-26 19:35:21,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:35:51] 2026-01-26 19:35:21,541 | INFO     | aborting loop
[2026-01-26 20:35:51] 2026-01-26 19:35:21,663 | INFO     | all payload control threads have been joined
[2026-01-26 20:35:51] 2026-01-26 19:35:21,724 | INFO     | all data control threads have been joined
[2026-01-26 20:35:51] 2026-01-26 19:35:21,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:35:51] 2026-01-26 19:35:22,277 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,277 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,468 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,547 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,669 | INFO     | [payload] control thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,730 | INFO     | [data] control thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:22,938 | INFO     | all job control threads have been joined
[2026-01-26 20:35:51] 2026-01-26 19:35:22,969 | INFO     | [job] validate thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,035 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,093 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,162 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,240 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,367 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,474 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,941 | INFO     | [job] control thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:23,970 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:24,659 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:35:51] 2026-01-26 19:35:28,666 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:35:51] 2026-01-26 19:35:32,285 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:35:51] 2026-01-26 19:35:34,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781476788032)>', '<ExcThread(monitor, started 139780809533184)>']
[2026-01-26 20:35:51] 2026-01-26 19:35:39,142 | INFO     | all workflow threads have been joined
[2026-01-26 20:35:51] 2026-01-26 19:35:39,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:35:51] 2026-01-26 19:35:39,143 | INFO     | traces error code: 0
[2026-01-26 20:35:51] 2026-01-26 19:35:39,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | INFO     | PID=1600818 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:35:51] 2026-01-26 19:35:51,582 | INFO     | [monitor] control thread has ended
[2026-01-26 20:35:51] 2026-01-26 19:35:51,659 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:35:51] 2026-01-26 19:35:51,663 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:35:51] 2026-01-26 19:35:51,667 [wrapper] pilotpid: 1600818
[2026-01-26 20:35:51] 2026-01-26 19:35:51,671 [wrapper] Pilot exit status: 0
[2026-01-26 20:35:51] 2026-01-26 19:35:51,683 [wrapper] pandaids: 6983772067
[2026-01-26 20:35:51] 2026-01-26 19:35:51,705 [wrapper] cleanup supervisor_pilot 1610628 1600819
[2026-01-26 20:35:51] 2026-01-26 19:35:51,709 [wrapper] Test setup, not cleaning
[2026-01-26 20:35:51] 2026-01-26 19:35:51,713 [wrapper] apfmon messages muted
[2026-01-26 20:35:51] 2026-01-26 19:35:51,716 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:35:51] 2026-01-26 19:35:51,720 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:35:51]  *** Error codes and diagnostics ***
[2026-01-26 20:35:51]     "exeErrorCode": 0,
[2026-01-26 20:35:51]     "exeErrorDiag": "",
[2026-01-26 20:35:51]     "pilotErrorCode": 0,
[2026-01-26 20:35:51]     "pilotErrorDiag": "",
[2026-01-26 20:35:51]  *** Listing of results directory ***
[2026-01-26 20:35:51] total 677072
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-26 20:35:51] -rwx------ 1 boinc boinc     36322 Jan 26 04:19 runpilot2-wrapper.sh
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:21 queuedata.json
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:35:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:17 run_atlas
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:17 job.xml
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc 497146286 Jan 26 19:17 EVNT.48318032._000060.pool.root.1
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc    597756 Jan 26 19:17 input.tar.gz
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:17 start_atlas.sh
[2026-01-26 20:35:51] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:17 shared
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:17 boinc_setup_complete
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc      6370 Jan 26 19:17 init_data.xml
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:17 boinc_lockfile
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc      2532 Jan 26 19:17 pandaJob.out
[2026-01-26 20:35:51] -rw------- 1 boinc boinc   1006384 Jan 26 19:17 agis_schedconf.cvmfs.json
[2026-01-26 20:35:51] -rw------- 1 boinc boinc   1516246 Jan 26 19:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:35:51] -rw------- 1 boinc boinc       418 Jan 26 19:17 workernode_map.json
[2026-01-26 20:35:51] drwx------ 5 boinc boinc      4096 Jan 26 19:17 pilot3
[2026-01-26 20:35:51] -rw------- 1 boinc boinc 190338809 Jan 26 20:34 HITS.48318034._002312.pool.root.1
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc       530 Jan 26 20:35 boinc_task_state.xml
[2026-01-26 20:35:51] -rw------- 1 boinc boinc      1020 Jan 26 20:35 memory_monitor_summary.json
[2026-01-26 20:35:51] -rw------- 1 boinc boinc    265888 Jan 26 20:35 log.48318034._002312.job.log.tgz.1
[2026-01-26 20:35:51] -rw------- 1 boinc boinc      6304 Jan 26 20:35 heartbeat.json
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc      8192 Jan 26 20:35 boinc_mmap_file
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc        27 Jan 26 20:35 wrapper_checkpoint.txt
[2026-01-26 20:35:51] -rw------- 1 boinc boinc       747 Jan 26 20:35 pilotlog.txt
[2026-01-26 20:35:51] -rw------- 1 boinc boinc        95 Jan 26 20:35 pilot_heartbeat.json
[2026-01-26 20:35:51] -rw------- 1 boinc boinc    688415 Jan 26 20:35 log.48318034._002312.job.log.1
[2026-01-26 20:35:51] -rw------- 1 boinc boinc       357 Jan 26 20:35 output.list
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc       620 Jan 26 20:35 runtime_log
[2026-01-26 20:35:51] -rw------- 1 boinc boinc    972800 Jan 26 20:35 result.tar.gz
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc      8901 Jan 26 20:35 runtime_log.err
[2026-01-26 20:35:51] -rw------- 1 boinc boinc       658 Jan 26 20:35 WJHMDmiJS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlP2KDmbQ3fqn.diag
[2026-01-26 20:35:51] -rw-r--r-- 1 boinc boinc     10191 Jan 26 20:35 stderr.txt
[2026-01-26 20:35:51] HITS file was successfully produced:
[2026-01-26 20:35:51] -rw------- 1 boinc boinc 190338809 Jan 26 20:34 shared/HITS.pool.root.1
[2026-01-26 20:35:51]  *** Contents of shared directory: ***
[2026-01-26 20:35:51] total 672936
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc 497146286 Jan 26 19:17 ATLAS.root_0
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc    597756 Jan 26 19:17 input.tar.gz
[2026-01-26 20:35:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:17 start_atlas.sh
[2026-01-26 20:35:51] -rw------- 1 boinc boinc 190338809 Jan 26 20:34 HITS.pool.root.1
[2026-01-26 20:35:51] -rw------- 1 boinc boinc    972800 Jan 26 20:35 result.tar.gz
20:35:53 (1596711): run_atlas exited; CPU time 17565.617592
20:35:53 (1596711): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN