Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:41 (3238): wrapper (7.7.26015): starting
17:20:41 (3238): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 17:20:41] Arguments: --nthreads 8
[2026-01-26 17:20:41] Threads: 8
[2026-01-26 17:20:41] Checking for CVMFS
[2026-01-26 17:20:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 17:20:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 17:20:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 17:20:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 17:20:45] 2.11.2.0 26228 60127 132520 155553 0 53 18276992 25165825 899 130560 0 24618065 99.860 15710543 2966 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 17:20:45] CVMFS is ok
[2026-01-26 17:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 17:20:45] Checking for apptainer binary...
[2026-01-26 17:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 17:20:45] Running /usr/bin/apptainer --version
[2026-01-26 17:20:45] apptainer version 1.3.2-1.el7
[2026-01-26 17:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 17:21:06] cg-vwn495.simple-grid.lan
[2026-01-26 17:21:06] apptainer works
[2026-01-26 17:21:06] Set ATHENA_PROC_NUMBER=8
[2026-01-26 17:21:06] Set ATHENA_CORE_NUMBER=8
[2026-01-26 17:21:06] Starting ATLAS job with PandaID=6983772134
[2026-01-26 17:21:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:23:54]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:23:54] 2026-01-26 20:23:15,589 | INFO     | chi2: 2.021214349336871
[2026-01-26 21:23:54] 2026-01-26 20:23:15,589 | INFO     | current chi2=2.021214349336871 (change=71.12935275055871 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,589 | INFO     | sum of square deviations: 3168461268.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,591 | INFO     | sum of deviations: 14014909332.000002
[2026-01-26 21:23:54] 2026-01-26 20:23:15,591 | INFO     | mean x: 1769452339.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,591 | INFO     | mean y: 2495881.0967741935
[2026-01-26 21:23:54] 2026-01-26 20:23:15,591 | INFO     | intersect: -7824241453.1531105
[2026-01-26 21:23:54] 2026-01-26 20:23:15,592 | INFO     | chi2: 0.022717198067262957
[2026-01-26 21:23:54] 2026-01-26 20:23:15,592 | INFO     | current chi2=0.022717198067262957 (change=98.8760619043341 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,592 | INFO     | sum of square deviations: 2954447953.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,594 | INFO     | sum of deviations: 10702439264.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,594 | INFO     | mean x: 1769452491.5
[2026-01-26 21:23:54] 2026-01-26 20:23:15,594 | INFO     | mean y: 2498223.962264151
[2026-01-26 21:23:54] 2026-01-26 20:23:15,594 | INFO     | intersect: -6407314411.79014
[2026-01-26 21:23:54] 2026-01-26 20:23:15,594 | INFO     | chi2: 0.003920997084144133
[2026-01-26 21:23:54] 2026-01-26 20:23:15,595 | INFO     | current chi2=0.003920997084144133 (change=82.73996171299592 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,595 | INFO     | sum of square deviations: 2750295288.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,596 | INFO     | sum of deviations: 8427218076.000001
[2026-01-26 21:23:54] 2026-01-26 20:23:15,597 | INFO     | mean x: 1769452644.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,597 | INFO     | mean y: 2499921.265700483
[2026-01-26 21:23:54] 2026-01-26 20:23:15,597 | INFO     | intersect: -5419304555.949691
[2026-01-26 21:23:54] 2026-01-26 20:23:15,597 | INFO     | chi2: 0.001858863632047251
[2026-01-26 21:23:54] 2026-01-26 20:23:15,597 | INFO     | current chi2=0.001858863632047251 (change=52.59206798280495 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,598 | INFO     | sum of square deviations: 2555770710.5
[2026-01-26 21:23:54] 2026-01-26 20:23:15,599 | INFO     | sum of deviations: 7054262772.000001
[2026-01-26 21:23:54] 2026-01-26 20:23:15,599 | INFO     | mean x: 1769452796.5
[2026-01-26 21:23:54] 2026-01-26 20:23:15,599 | INFO     | mean y: 2500995.1485148515
[2026-01-26 21:23:54] 2026-01-26 20:23:15,600 | INFO     | intersect: -4881421078.877947
[2026-01-26 21:23:54] 2026-01-26 20:23:15,600 | INFO     | chi2: 0.001274119293161074
[2026-01-26 21:23:54] 2026-01-26 20:23:15,600 | INFO     | current chi2=0.001274119293161074 (change=31.457086405105013 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,600 | INFO     | sum of square deviations: 2370641658.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,602 | INFO     | sum of deviations: 6029965656.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,602 | INFO     | mean x: 1769452949.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,602 | INFO     | mean y: 2501838.771573604
[2026-01-26 21:23:54] 2026-01-26 20:23:15,602 | INFO     | intersect: -4498279827.817161
[2026-01-26 21:23:54] 2026-01-26 20:23:15,603 | INFO     | chi2: 0.001026350586275218
[2026-01-26 21:23:54] 2026-01-26 20:23:15,603 | INFO     | current chi2=0.001026350586275218 (change=19.446272277311255 %)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,603 | INFO     | left removable region: 60
[2026-01-26 21:23:54] 2026-01-26 20:23:15,603 | INFO     | sum of square deviations: 1294014960.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,604 | INFO     | sum of deviations: 2074501785.9999998
[2026-01-26 21:23:54] 2026-01-26 20:23:15,604 | INFO     | mean x: 1769453681.0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,605 | INFO     | mean y: 2505357.403726708
[2026-01-26 21:23:54] 2026-01-26 20:23:15,605 | INFO     | intersect: -2834196639.827259
[2026-01-26 21:23:54] 2026-01-26 20:23:15,605 | INFO     | chi2: 0.0003316883741083225
[2026-01-26 21:23:54] 2026-01-26 20:23:15,605 | INFO     | current memory leak: 1.60 B/s (using 161 data points, chi2=0.00)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | ..............................
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | . Timing measurements:
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | . get job = 0 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | . initial setup = 115 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | . payload setup = 156 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,606 | INFO     | . stage-in = 0 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,607 | INFO     | . payload execution = 13985 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,607 | INFO     | . stage-out = 1 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,607 | INFO     | . log creation = 0 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,607 | INFO     | ..............................
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | 
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | job summary report
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | --------------------------------------------------
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | PanDA job id: 6983772134
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | task id: 48318034
[2026-01-26 21:23:54] 2026-01-26 20:23:15,711 | INFO     | errors: (none)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | pilot state: finished 
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | transexitcode: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | exeerrorcode: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | exeerrordiag: 
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | exitcode: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | exitmsg: OK
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | cpuconsumptiontime: 53383 s
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | nevents: 400
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | neventsw: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:15,712 | INFO     | pid: 11698
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | pgrp: 11698
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | corecount: 8
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | event service: False
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | sizes: {0: 2283769, 1: 2283797, 2: 2284258, 14145: 2314643, 14146: 2323643, 14147: 2323699, 14150: 2324021}
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | --------------------------------------------------
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | 
[2026-01-26 21:23:54] 2026-01-26 20:23:15,713 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | job 6983772134 has completed (purged errors)
[2026-01-26 21:23:54] 2026-01-26 20:23:15,750 | INFO     | overall cleanup function is called
[2026-01-26 21:23:54] 2026-01-26 20:23:16,758 | INFO     | --- collectZombieJob: --- 10, [11698]
[2026-01-26 21:23:54] 2026-01-26 20:23:16,759 | INFO     | zombie collector waiting for pid 11698
[2026-01-26 21:23:54] 2026-01-26 20:23:16,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:23:54] 2026-01-26 20:23:16,759 | INFO     | collected zombie processes
[2026-01-26 21:23:54] 2026-01-26 20:23:16,759 | INFO     | will attempt to kill all subprocesses of pid=11698
[2026-01-26 21:23:54] 2026-01-26 20:23:16,821 | INFO     | process IDs to be killed: [11698] (in reverse order)
[2026-01-26 21:23:54] 2026-01-26 20:23:16,870 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:23:54] 2026-01-26 20:23:16,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:23:54] 2026-01-26 20:23:16,877 | INFO     | did not find any defunct processes belonging to 11698
[2026-01-26 21:23:54] 2026-01-26 20:23:16,883 | INFO     | did not find any defunct processes belonging to 11698
[2026-01-26 21:23:54] 2026-01-26 20:23:16,883 | INFO     | ready for new job
[2026-01-26 21:23:54] 2026-01-26 20:23:16,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:23:54] 2026-01-26 20:23:16,885 | INFO     | **************************************
[2026-01-26 21:23:54] 2026-01-26 20:23:16,885 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:23:54] 2026-01-26 20:23:16,886 | INFO     | **************************************
[2026-01-26 21:23:54] 2026-01-26 20:23:16,886 | INFO     | 
[2026-01-26 21:23:54] 2026-01-26 20:23:16,887 | INFO     | pilot is running in a VM
[2026-01-26 21:23:54] 2026-01-26 20:23:16,887 | INFO     | architecture information:
[2026-01-26 21:23:54] 2026-01-26 20:23:16,887 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:23:54] 2026-01-26 20:23:16,913 | INFO     | cat /etc/os-release:
[2026-01-26 21:23:54] NAME="CentOS Linux"
[2026-01-26 21:23:54] VERSION="7 (Core)"
[2026-01-26 21:23:54] ID="centos"
[2026-01-26 21:23:54] ID_LIKE="rhel fedora"
[2026-01-26 21:23:54] VERSION_ID="7"
[2026-01-26 21:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:23:54] ANSI_COLOR="0;31"
[2026-01-26 21:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:23:54] HOME_URL="https://www.centos.org/"
[2026-01-26 21:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:23:54] 
[2026-01-26 21:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:23:54] 
[2026-01-26 21:23:54] 2026-01-26 20:23:16,914 | INFO     | **************************************
[2026-01-26 21:23:54] 2026-01-26 20:23:16,934 | WARNING  | process 11698 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 21:23:54] 2026-01-26 20:23:16,982 | INFO     | using path: /var/lib/boinc/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:23:54] 2026-01-26 20:23:16,983 | INFO     | using path: /var/lib/boinc/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:23:54] 2026-01-26 20:23:16,984 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 21:23:54] 2026-01-26 20:23:16,984 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 21:23:54] 2026-01-26 20:23:17,043 | INFO     | number of running child processes to parent process 11698: 1
[2026-01-26 21:23:54] 2026-01-26 20:23:17,044 | INFO     | maximum number of monitored processes: 9
[2026-01-26 21:23:54] 2026-01-26 20:23:17,044 | INFO     | aborting job monitoring since job object (job id=6983772134) has expired
[2026-01-26 21:23:54] 2026-01-26 20:23:17,417 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-26 21:23:54] 2026-01-26 20:23:17,433 | INFO     | sufficient remaining disk space (496639148032 B)
[2026-01-26 21:23:54] 2026-01-26 20:23:17,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:23:54] 2026-01-26 20:23:17,434 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:23:54] 2026-01-26 20:23:17,434 | INFO     | update_server=False
[2026-01-26 21:23:54] 2026-01-26 20:23:17,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:23:54] 2026-01-26 20:23:17,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:23:54] 2026-01-26 20:23:17,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:23:54] 2026-01-26 20:23:17,435 | INFO     | will abort loop
[2026-01-26 21:23:54] 2026-01-26 20:23:17,602 | INFO     | all data control threads have been joined
[2026-01-26 21:23:54] 2026-01-26 20:23:17,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:23:54] 2026-01-26 20:23:18,439 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,441 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,441 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,477 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,569 | INFO     | all job control threads have been joined
[2026-01-26 21:23:54] 2026-01-26 20:23:18,608 | INFO     | [data] control thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,658 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:18,668 | INFO     | all payload control threads have been joined
[2026-01-26 21:23:54] 2026-01-26 20:23:18,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:23:54] 2026-01-26 20:23:18,915 | INFO     | [job] validate thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,147 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,314 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,575 | INFO     | [job] control thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,674 | INFO     | [payload] control thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,802 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,814 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:19,919 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:22,810 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:23:54] 2026-01-26 20:23:47,278 | INFO     | PID=7228 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 21:23:54] 2026-01-26 20:23:47,278 | INFO     | .. there are 2 such processes running
[2026-01-26 21:23:54] 2026-01-26 20:23:47,279 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:23:54] 2026-01-26 20:23:47,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:23:54] 2026-01-26 20:23:47,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:23:54] 2026-01-26 20:23:47,735 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:23:54] 2026-01-26 20:23:49,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658020341568)>', '<ExcThread(monitor, started 139657362794240)>']
[2026-01-26 21:23:54] 2026-01-26 20:23:49,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:23:54] 2026-01-26 20:23:49,290 | INFO     | [monitor] control thread has ended
[2026-01-26 21:23:54] 2026-01-26 20:23:54,107 | INFO     | all workflow threads have been joined
[2026-01-26 21:23:54] 2026-01-26 20:23:54,107 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:23:54] 2026-01-26 20:23:54,107 | INFO     | traces error code: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:54,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:23:54] 2026-01-26 20:23:54,236 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:23:54] 2026-01-26 20:23:54,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:23:54] 2026-01-26 20:23:54,243 [wrapper] pilotpid: 7228
[2026-01-26 21:23:54] 2026-01-26 20:23:54,248 [wrapper] Pilot exit status: 0
[2026-01-26 21:23:54] 2026-01-26 20:23:54,273 [wrapper] pandaids: 6983772134
[2026-01-26 21:23:54] 2026-01-26 20:23:54,307 [wrapper] cleanup supervisor_pilot 17718 7229
[2026-01-26 21:23:54] 2026-01-26 20:23:54,312 [wrapper] Test setup, not cleaning
[2026-01-26 21:23:54] 2026-01-26 20:23:54,324 [wrapper] apfmon messages muted
[2026-01-26 21:23:54] 2026-01-26 20:23:54,327 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:23:54] 2026-01-26 20:23:54,331 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:23:54]  *** Error codes and diagnostics ***
[2026-01-26 21:23:54]     "exeErrorCode": 0,
[2026-01-26 21:23:54]     "exeErrorDiag": "",
[2026-01-26 21:23:54]     "pilotErrorCode": 0,
[2026-01-26 21:23:54]     "pilotErrorDiag": "",
[2026-01-26 21:23:54]  *** Listing of results directory ***
[2026-01-26 21:23:54] total 680452
[2026-01-26 21:23:54] -rwx------. 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc      5111 Jan 26 04:19 queuedata.json
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc       100 Jan 26 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:23:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 17:20 run_atlas
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc       105 Jan 26 17:20 job.xml
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc 502972251 Jan 26 17:20 EVNT.48318032._000061.pool.root.1
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc     15845 Jan 26 17:20 start_atlas.sh
[2026-01-26 21:23:54] drwxrwx--x. 2 boinc boinc        68 Jan 26 17:20 shared
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc    597762 Jan 26 17:20 input.tar.gz
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc      6391 Jan 26 17:20 init_data.xml
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc         0 Jan 26 17:20 boinc_lockfile
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc      2533 Jan 26 17:21 pandaJob.out
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc       415 Jan 26 17:27 workernode_map.json
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc   1006276 Jan 26 17:27 agis_schedconf.cvmfs.json
[2026-01-26 21:23:54] drwx------. 5 boinc boinc      4096 Jan 26 17:27 pilot3
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc 184922639 Jan 26 21:22 HITS.48318034._002379.pool.root.1
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc       531 Jan 26 21:22 boinc_task_state.xml
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc        95 Jan 26 21:23 pilot_heartbeat.json
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc      1021 Jan 26 21:23 memory_monitor_summary.json
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc   1516246 Jan 26 21:23 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc    480106 Jan 26 21:23 log.48318034._002379.job.log.tgz.1
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc      6326 Jan 26 21:23 heartbeat.json
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc      8192 Jan 26 21:23 boinc_mmap_file
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc        28 Jan 26 21:23 wrapper_checkpoint.txt
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc      5722 Jan 26 21:23 pilotlog.txt
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc   1999991 Jan 26 21:23 log.48318034._002379.job.log.1
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc       357 Jan 26 21:23 output.list
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc       620 Jan 26 21:23 runtime_log
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc   2498560 Jan 26 21:23 result.tar.gz
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc      8832 Jan 26 21:23 runtime_log.err
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc       656 Jan 26 21:23 rEoNDm7HS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuv8KDmoPZ6To.diag
[2026-01-26 21:23:54] -rw-r--r--. 1 boinc boinc     20894 Jan 26 21:23 stderr.txt
[2026-01-26 21:23:54] HITS file was successfully produced:
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc 184922639 Jan 26 21:22 shared/HITS.pool.root.1
[2026-01-26 21:23:54]  *** Contents of shared directory: ***
[2026-01-26 21:23:54] total 674816
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc 502972251 Jan 26 17:20 ATLAS.root_0
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc     15845 Jan 26 17:20 start_atlas.sh
[2026-01-26 21:23:54] -rw-r--r--. 2 boinc boinc    597762 Jan 26 17:20 input.tar.gz
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc 184922639 Jan 26 21:22 HITS.pool.root.1
[2026-01-26 21:23:54] -rw-------. 1 boinc boinc   2498560 Jan 26 21:23 result.tar.gz
21:23:55 (3238): run_atlas exited; CPU time 53526.253212
21:23:55 (3238): called boinc_finish(0)

</stderr_txt>
]]>

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