Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:08:02 (457148): wrapper (7.7.26015): starting
01:08:02 (457148): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 01:08:02] Arguments: --nthreads 3
[2026-01-27 01:08:02] Threads: 3
[2026-01-27 01:08:02] Checking for CVMFS
[2026-01-27 01:08:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:08:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:08:03] 2.9.2.0 3291900 8973 93344 155566 1 50 17169722 36864000 0 130560 0 3874817 99.986 288905 6287 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 01:08:03] CVMFS is ok
[2026-01-27 01:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:08:03] Further information can be found at the LHC@home message board.
[2026-01-27 01:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:08:03] Checking for apptainer binary...
[2026-01-27 01:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:08:03] Running /usr/bin/apptainer --version
[2026-01-27 01:08:03] apptainer version 1.4.1-1.1
[2026-01-27 01:08:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:08:03] cosA127
[2026-01-27 01:08:03] apptainer works
[2026-01-27 01:08:03] Set ATHENA_PROC_NUMBER=3
[2026-01-27 01:08:03] Set ATHENA_CORE_NUMBER=3
[2026-01-27 01:08:03] Starting ATLAS job with PandaID=6983772128
[2026-01-27 01:08:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 02:32:25]  *** The last 200 lines of the pilot log: ***
[2026-01-27 02:32:25]  lfn=log.48318034._002373.job.log.tgz.1
[2026-01-27 02:32:25]  mtime=0
[2026-01-27 02:32:25]  protocol_id=None
[2026-01-27 02:32:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 02:32:25]  replicas=None
[2026-01-27 02:32:25]  scope=mc23_13p6TeV
[2026-01-27 02:32:25]  status=None
[2026-01-27 02:32:25]  status_code=0
[2026-01-27 02:32:25]  storage_token=
[2026-01-27 02:32:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983772128/log.48318034._002373.job.log.tgz.1
[2026-01-27 02:32:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/85/log.48318034._002373.job.log.tgz.1
[2026-01-27 02:32:25]  workdir=None
[2026-01-27 02:32:25] ]
[2026-01-27 02:32:25] 2026-01-27 01:31:48,056 | INFO     | transferring file log.48318034._002373.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983772128/log.48318034._002373.job.log.tgz.1 to /local/data/boinc/
[2026-01-27 02:32:25] 2026-01-27 01:31:48,056 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983772128/log.48318034._002373.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0023
[2026-01-27 02:32:25] 2026-01-27 01:31:48,067 | INFO     | adding to output.list: log.48318034._002373.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/85/log.48318034._002373.job.log.tg
[2026-01-27 02:32:25] 2026-01-27 01:31:48,068 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 02:32:25] 2026-01-27 01:31:48,068 | INFO     | summary of transferred files:
[2026-01-27 02:32:25] 2026-01-27 01:31:48,068 | INFO     |  -- lfn=log.48318034._002373.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 02:32:25] 2026-01-27 01:31:48,068 | INFO     | stage-out finished correctly
[2026-01-27 02:32:25] 2026-01-27 01:31:48,329 | INFO     | time since job start (5015s) is within the limit (349056.0s)
[2026-01-27 02:32:25] 2026-01-27 01:31:49,935 | WARNING  | process 465618 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 02:32:25] 2026-01-27 01:31:49,935 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983772128/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:32:25] 2026-01-27 01:31:49,977 | INFO     | number of running child processes to parent process 465618: 1
[2026-01-27 02:32:25] 2026-01-27 01:31:49,977 | INFO     | maximum number of monitored processes: 6
[2026-01-27 02:32:25] 2026-01-27 01:31:50,335 | INFO     | time since job start (5017s) is within the limit (349056.0s)
[2026-01-27 02:32:25] 2026-01-27 01:31:51,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 02:32:25] 2026-01-27 01:31:52,341 | INFO     | time since job start (5019s) is within the limit (349056.0s)
[2026-01-27 02:32:25] 2026-01-27 01:31:52,481 | INFO     | monitor loop #387: job 0:6983772128 is in state 'finished'
[2026-01-27 02:32:25] 2026-01-27 01:31:52,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,408 | INFO     | PID=461190 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 02:32:25] 2026-01-27 01:31:53,989 | INFO     | job 6983772128 has state=finished
[2026-01-27 02:32:25] 2026-01-27 01:31:53,989 | INFO     | preparing for final server update for job 6983772128 in state='finished'
[2026-01-27 02:32:25] 2026-01-27 01:31:53,990 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983772128/jobReport.json
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | this job has now completed (state=finished)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | log transfer has been attempted: DONE
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | job 6983772128 has finished - writing final server update
[2026-01-27 02:32:25] 2026-01-27 01:31:53,991 | INFO     | total number of processed events: 400 (read)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983772128/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | INFO     | extracted standard info from prmon json
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 02:32:25] 2026-01-27 01:31:53,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | fitting pss+swap vs Time
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | sum of square deviations: 130793150.0
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | sum of deviations: -1191007248.9999998
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | mean x: 1769475072.0
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | mean y: 2357637.84
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | intersect: 16115262921.310858
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | chi2: 0.035111551584713255
[2026-01-27 02:32:25] 2026-01-27 01:31:53,994 | INFO     | current memory leak: -9.11 B/s (using 75 data points, chi2=0.04)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | could have reported an average CPU frequency of 3755 MHz (6 samples)
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | ..............................
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . Timing measurements:
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . get job = 0 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . initial setup = 3 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . payload setup = 2 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . stage-in = 0 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . payload execution = 4997 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . stage-out = 0 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | . log creation = 0 s
[2026-01-27 02:32:25] 2026-01-27 01:31:53,995 | INFO     | ..............................
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | 
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | job summary report
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | --------------------------------------------------
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | PanDA job id: 6983772128
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | task id: 48318034
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | errors: (none)
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | pilot state: finished 
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | transexitcode: 0
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | exeerrorcode: 0
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | exeerrordiag: 
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | exitcode: 0
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | exitmsg: OK
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | cpuconsumptiontime: 14387 s
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | nevents: 400
[2026-01-27 02:32:25] 2026-01-27 01:31:54,025 | INFO     | neventsw: 0
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | pid: 465618
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | pgrp: 465618
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | corecount: 3
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | event service: False
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | sizes: {0: 2284202, 11: 2284202, 5003: 2310661, 5004: 2319665, 5007: 2319721, 5009: 2319915}
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | --------------------------------------------------
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | 
[2026-01-27 02:32:25] 2026-01-27 01:31:54,026 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | job 6983772128 has completed (purged errors)
[2026-01-27 02:32:25] 2026-01-27 01:31:54,038 | INFO     | overall cleanup function is called
[2026-01-27 02:32:25] 2026-01-27 01:31:55,044 | INFO     | --- collectZombieJob: --- 10, [465618]
[2026-01-27 02:32:25] 2026-01-27 01:31:55,045 | INFO     | zombie collector waiting for pid 465618
[2026-01-27 02:32:25] 2026-01-27 01:31:55,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 02:32:25] 2026-01-27 01:31:55,045 | INFO     | collected zombie processes
[2026-01-27 02:32:25] 2026-01-27 01:31:55,045 | INFO     | will attempt to kill all subprocesses of pid=465618
[2026-01-27 02:32:25] 2026-01-27 01:31:55,093 | INFO     | process IDs to be killed: [465618] (in reverse order)
[2026-01-27 02:32:25] 2026-01-27 01:31:55,118 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 02:32:25] 2026-01-27 01:31:55,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 02:32:25] 2026-01-27 01:31:55,120 | INFO     | did not find any defunct processes belonging to 465618
[2026-01-27 02:32:25] 2026-01-27 01:31:55,121 | INFO     | did not find any defunct processes belonging to 465618
[2026-01-27 02:32:25] 2026-01-27 01:31:55,121 | INFO     | ready for new job
[2026-01-27 02:32:25] 2026-01-27 01:31:55,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | **************************************
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | **************************************
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | 
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | architecture information:
[2026-01-27 02:32:25] 2026-01-27 01:31:55,122 | INFO     | executing command: cat /etc/os-release
[2026-01-27 02:32:25] 2026-01-27 01:31:55,131 | INFO     | cat /etc/os-release:
[2026-01-27 02:32:25] NAME="CentOS Linux"
[2026-01-27 02:32:25] VERSION="7 (Core)"
[2026-01-27 02:32:25] ID="centos"
[2026-01-27 02:32:25] ID_LIKE="rhel fedora"
[2026-01-27 02:32:25] VERSION_ID="7"
[2026-01-27 02:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 02:32:25] ANSI_COLOR="0;31"
[2026-01-27 02:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 02:32:25] HOME_URL="https://www.centos.org/"
[2026-01-27 02:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 02:32:25] 
[2026-01-27 02:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 02:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 02:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 02:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 02:32:25] 
[2026-01-27 02:32:25] 2026-01-27 01:31:55,131 | INFO     | **************************************
[2026-01-27 02:32:25] 2026-01-27 01:31:55,634 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | INFO     | sufficient remaining disk space (337846992896 B)
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | INFO     | update_server=False
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 02:32:25] 2026-01-27 01:31:55,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:32:25] 2026-01-27 01:31:55,771 | INFO     | all payload control threads have been joined
[2026-01-27 02:32:25] 2026-01-27 01:31:55,823 | INFO     | all job control threads have been joined
[2026-01-27 02:32:25] 2026-01-27 01:31:55,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:32:25] 2026-01-27 01:31:55,991 | INFO     | aborting loop
[2026-01-27 02:32:25] 2026-01-27 01:31:56,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 02:32:25] 2026-01-27 01:31:56,611 | INFO     | all data control threads have been joined
[2026-01-27 02:32:25] 2026-01-27 01:31:56,653 | INFO     | [job] queue monitor thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:56,653 | INFO     | [job] retrieve thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:56,777 | INFO     | [payload] control thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:56,828 | INFO     | [job] control thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:56,829 | INFO     | [payload] validate_post thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:56,997 | INFO     | [job] job monitor thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,549 | INFO     | [job] validate thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 02:32:25] 2026-01-27 01:31:57,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,607 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,615 | INFO     | [data] control thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,671 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,778 | INFO     | [data] copytool_in thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:57,902 | INFO     | [payload] failed_post thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:31:58,115 | INFO     | [data] copytool_out thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:32:01,600 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:32:06,301 | INFO     | job.realtimelogging is not enabled
[2026-01-27 02:32:25] 2026-01-27 01:32:07,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 02:32:25] 2026-01-27 01:32:18,916 | INFO     | [monitor] cgroup control has ended
[2026-01-27 02:32:25] 2026-01-27 01:32:19,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811290064704)>', '<ExcThread(monitor, started 139810933020416)>']
[2026-01-27 02:32:25] 2026-01-27 01:32:24,321 | INFO     | all workflow threads have been joined
[2026-01-27 02:32:25] 2026-01-27 01:32:24,322 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 02:32:25] 2026-01-27 01:32:24,322 | INFO     | traces error code: 0
[2026-01-27 02:32:25] 2026-01-27 01:32:24,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | INFO     | PID=461190 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 02:32:25] 2026-01-27 01:32:25,522 | INFO     | [monitor] control thread has ended
[2026-01-27 02:32:25] 2026-01-27 01:32:25,568 [wrapper] ==== pilot stdout END ====
[2026-01-27 02:32:25] 2026-01-27 01:32:25,571 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 02:32:25] 2026-01-27 01:32:25,573 [wrapper] pilotpid: 461190
[2026-01-27 02:32:25] 2026-01-27 01:32:25,575 [wrapper] Pilot exit status: 0
[2026-01-27 02:32:25] 2026-01-27 01:32:25,582 [wrapper] pandaids: 6983772128
[2026-01-27 02:32:25] 2026-01-27 01:32:25,599 [wrapper] cleanup supervisor_pilot  470859 461191
[2026-01-27 02:32:25] 2026-01-27 01:32:25,601 [wrapper] Test setup, not cleaning
[2026-01-27 02:32:25] 2026-01-27 01:32:25,603 [wrapper] apfmon messages muted
[2026-01-27 02:32:25] 2026-01-27 01:32:25,606 [wrapper] ==== wrapper stdout END ====
[2026-01-27 02:32:25] 2026-01-27 01:32:25,608 [wrapper] ==== wrapper stderr END ====
[2026-01-27 02:32:25]  *** Error codes and diagnostics ***
[2026-01-27 02:32:25]     "exeErrorCode": 0,
[2026-01-27 02:32:25]     "exeErrorDiag": "",
[2026-01-27 02:32:25]     "pilotErrorCode": 0,
[2026-01-27 02:32:25]     "pilotErrorDiag": "",
[2026-01-27 02:32:25]  *** Listing of results directory ***
[2026-01-27 02:32:25] total 671172
[2026-01-27 02:32:25] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:19 queuedata.json
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 02:32:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:08 run_atlas
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:08 job.xml
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc 502972251 Jan 27 01:08 EVNT.48318032._000061.pool.root.1
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc    597762 Jan 27 01:08 input.tar.gz
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:08 start_atlas.sh
[2026-01-27 02:32:25] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:08 shared
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:08 boinc_setup_complete
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc      6439 Jan 27 01:08 init_data.xml
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:08 boinc_lockfile
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc      2532 Jan 27 01:08 pandaJob.out
[2026-01-27 02:32:25] -rw------- 1 boinc boinc   1006441 Jan 27 01:08 agis_schedconf.cvmfs.json
[2026-01-27 02:32:25] -rw------- 1 boinc boinc   1516246 Jan 27 01:08 agis_ddmendpoints.agis.ALL.json
[2026-01-27 02:32:25] -rw------- 1 boinc boinc       427 Jan 27 01:08 workernode_map.json
[2026-01-27 02:32:25] drwx------ 5 boinc boinc      4096 Jan 27 01:08 pilot3
[2026-01-27 02:32:25] -rw------- 1 boinc boinc 178369402 Jan 27 02:31 HITS.48318034._002373.pool.root.1
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc       530 Jan 27 02:31 boinc_task_state.xml
[2026-01-27 02:32:25] -rw------- 1 boinc boinc        95 Jan 27 02:31 pilot_heartbeat.json
[2026-01-27 02:32:25] -rw------- 1 boinc boinc      1023 Jan 27 02:31 memory_monitor_summary.json
[2026-01-27 02:32:25] -rw------- 1 boinc boinc    266548 Jan 27 02:31 log.48318034._002373.job.log.tgz.1
[2026-01-27 02:32:25] -rw------- 1 boinc boinc      6310 Jan 27 02:31 heartbeat.json
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc      8192 Jan 27 02:32 boinc_mmap_file
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc        27 Jan 27 02:32 wrapper_checkpoint.txt
[2026-01-27 02:32:25] -rw------- 1 boinc boinc       746 Jan 27 02:32 pilotlog.txt
[2026-01-27 02:32:25] -rw------- 1 boinc boinc    734374 Jan 27 02:32 log.48318034._002373.job.log.1
[2026-01-27 02:32:25] -rw------- 1 boinc boinc       357 Jan 27 02:32 output.list
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc       620 Jan 27 02:32 runtime_log
[2026-01-27 02:32:25] -rw------- 1 boinc boinc   1013760 Jan 27 02:32 result.tar.gz
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc      8901 Jan 27 02:32 runtime_log.err
[2026-01-27 02:32:25] -rw------- 1 boinc boinc       658 Jan 27 02:32 UGhNDm7HS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpv8KDmQCXKxn.diag
[2026-01-27 02:32:25] -rw-r--r-- 1 boinc boinc     21756 Jan 27 02:32 stderr.txt
[2026-01-27 02:32:25] HITS file was successfully produced:
[2026-01-27 02:32:25] -rw------- 1 boinc boinc 178369402 Jan 27 02:31 shared/HITS.pool.root.1
[2026-01-27 02:32:25]  *** Contents of shared directory: ***
[2026-01-27 02:32:25] total 666976
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc 502972251 Jan 27 01:08 ATLAS.root_0
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc    597762 Jan 27 01:08 input.tar.gz
[2026-01-27 02:32:25] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:08 start_atlas.sh
[2026-01-27 02:32:25] -rw------- 1 boinc boinc 178369402 Jan 27 02:31 HITS.pool.root.1
[2026-01-27 02:32:25] -rw------- 1 boinc boinc   1013760 Jan 27 02:32 result.tar.gz
02:32:27 (457148): run_atlas exited; CPU time 14415.932485
02:32:27 (457148): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN