Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:17 (11668): wrapper (7.7.26015): starting
16:47:17 (11668): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 16:47:17] Arguments: --nthreads 8
[2026-01-26 16:47:17] Threads: 8
[2026-01-26 16:47:17] Checking for CVMFS
[2026-01-26 16:47:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:47:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:47:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:47:21] 2.11.2.0 21950 60093 133540 155551 3 55 19904886 25165825 899 130560 0 21354350 99.835 14554807 3147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 16:47:21] CVMFS is ok
[2026-01-26 16:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:47:21] Checking for apptainer binary...
[2026-01-26 16:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:47:21] Running /usr/bin/apptainer --version
[2026-01-26 16:47:21] apptainer version 1.3.2-1.el7
[2026-01-26 16:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:47:57] cg-vwn481.simple-grid.lan
[2026-01-26 16:47:57] apptainer works
[2026-01-26 16:47:57] Set ATHENA_PROC_NUMBER=8
[2026-01-26 16:47:57] Set ATHENA_CORE_NUMBER=8
[2026-01-26 16:47:57] Starting ATLAS job with PandaID=6983772632
[2026-01-26 16:47:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:45:17]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:45:17] 2026-01-26 19:44:38,561 | INFO     | extracted standard info from prmon json
[2026-01-26 20:45:17] 2026-01-26 19:44:38,561 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:45:17] 2026-01-26 19:44:38,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:45:17] 2026-01-26 19:44:38,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:45:17] 2026-01-26 19:44:38,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:45:17] 2026-01-26 19:44:38,566 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:45:17] 2026-01-26 19:44:38,566 | INFO     | sum of square deviations: 3438620752.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,568 | INFO     | sum of deviations: 116880405786.00002
[2026-01-26 20:45:17] 2026-01-26 19:44:38,568 | INFO     | mean x: 1769449870.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,568 | INFO     | mean y: 2401987.784753363
[2026-01-26 20:45:17] 2026-01-26 19:44:38,569 | INFO     | intersect: -60142066896.51894
[2026-01-26 20:45:17] 2026-01-26 19:44:38,569 | INFO     | chi2: 7.649125974401717
[2026-01-26 20:45:17] 2026-01-26 19:44:38,572 | INFO     | sum of square deviations: 3212467674.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,574 | INFO     | sum of deviations: 128629737389.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,574 | INFO     | mean x: 1769449717.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,575 | INFO     | mean y: 2409729.600917431
[2026-01-26 20:45:17] 2026-01-26 19:44:38,575 | INFO     | intersect: -70847751438.59668
[2026-01-26 20:45:17] 2026-01-26 19:44:38,575 | INFO     | chi2: 6.939739383338707
[2026-01-26 20:45:17] 2026-01-26 19:44:38,575 | INFO     | current chi2=6.939739383338707 (change=9.274086914466011 %)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,575 | INFO     | right removable region: 217
[2026-01-26 20:45:17] 2026-01-26 19:44:38,576 | INFO     | sum of square deviations: 3212467674.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,577 | INFO     | sum of deviations: 42826736100.99999
[2026-01-26 20:45:17] 2026-01-26 19:44:38,578 | INFO     | mean x: 1769450022.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,578 | INFO     | mean y: 2451879.1559633026
[2026-01-26 20:45:17] 2026-01-26 19:44:38,578 | INFO     | intersect: -23586818686.597084
[2026-01-26 20:45:17] 2026-01-26 19:44:38,578 | INFO     | chi2: 3.00212417391033
[2026-01-26 20:45:17] 2026-01-26 19:44:38,578 | INFO     | current chi2=3.00212417391033 (change=60.75206260222242 %)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,579 | INFO     | sum of square deviations: 2996454322.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,580 | INFO     | sum of deviations: -7891058941.999998
[2026-01-26 20:45:17] 2026-01-26 19:44:38,580 | INFO     | mean x: 1769450175.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,581 | INFO     | mean y: 2487569.2582159624
[2026-01-26 20:45:17] 2026-01-26 19:44:38,581 | INFO     | intersect: 4662273478.004403
[2026-01-26 20:45:17] 2026-01-26 19:44:38,581 | INFO     | chi2: 0.8610025026383975
[2026-01-26 20:45:17] 2026-01-26 19:44:38,581 | INFO     | current chi2=0.8610025026383975 (change=71.32022352303557 %)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,582 | INFO     | sum of square deviations: 2790348132.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,583 | INFO     | sum of deviations: -9839718124.499998
[2026-01-26 20:45:17] 2026-01-26 19:44:38,583 | INFO     | mean x: 1769450327.5
[2026-01-26 20:45:17] 2026-01-26 19:44:38,584 | INFO     | mean y: 2488936.5240384615
[2026-01-26 20:45:17] 2026-01-26 19:44:38,584 | INFO     | intersect: 6242173604.624874
[2026-01-26 20:45:17] 2026-01-26 19:44:38,584 | INFO     | chi2: 0.812592758273298
[2026-01-26 20:45:17] 2026-01-26 19:44:38,584 | INFO     | current chi2=0.812592758273298 (change=5.622485906458571 %)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,584 | INFO     | left removable region: 30
[2026-01-26 20:45:17] 2026-01-26 19:44:38,585 | INFO     | sum of square deviations: 2027639878.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,586 | INFO     | sum of deviations: 3310576811.0000005
[2026-01-26 20:45:17] 2026-01-26 19:44:38,586 | INFO     | mean x: 1769450602.0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,586 | INFO     | mean y: 2499972.320855615
[2026-01-26 20:45:17] 2026-01-26 19:44:38,586 | INFO     | intersect: -2886524945.1458697
[2026-01-26 20:45:17] 2026-01-26 19:44:38,587 | INFO     | chi2: 0.0004818983151455803
[2026-01-26 20:45:17] 2026-01-26 19:44:38,587 | INFO     | current memory leak: 1.63 B/s (using 187 data points, chi2=0.00)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,587 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | ..............................
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . Timing measurements:
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . get job = 0 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . initial setup = 113 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . payload setup = 151 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . stage-in = 0 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . payload execution = 13693 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,588 | INFO     | . stage-out = 3 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,589 | INFO     | . log creation = 2 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,589 | INFO     | ..............................
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | 
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | job summary report
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | --------------------------------------------------
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | PanDA job id: 6983772632
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | task id: 48317872
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | errors: (none)
[2026-01-26 20:45:17] 2026-01-26 19:44:38,933 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | pilot state: finished 
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | transexitcode: 0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | exeerrorcode: 0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | exeerrordiag: 
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | exitcode: 0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | exitmsg: OK
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | cpuconsumptiontime: 51462 s
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | nevents: 400
[2026-01-26 20:45:17] 2026-01-26 19:44:38,934 | INFO     | neventsw: 0
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | pid: 20078
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | pgrp: 20078
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | corecount: 8
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | event service: False
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | sizes: {0: 2283798, 1: 2284259, 13848: 2314564, 13849: 2314563, 13853: 2323619, 13854: 2323675, 13855: 2323997}
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | --------------------------------------------------
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | 
[2026-01-26 20:45:17] 2026-01-26 19:44:38,935 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-26 20:45:17] 2026-01-26 19:44:38,940 | INFO     | time since job start (13856s) is within the limit (349056.0s)
[2026-01-26 20:45:17] 2026-01-26 19:44:39,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:45:17] 2026-01-26 19:44:39,490 | INFO     | job 6983772632 has completed (purged errors)
[2026-01-26 20:45:17] 2026-01-26 19:44:39,491 | INFO     | overall cleanup function is called
[2026-01-26 20:45:17] 2026-01-26 19:44:40,052 | INFO     | PID=15644 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 20:45:17] 2026-01-26 19:44:40,052 | INFO     | .. there are 2 such processes running
[2026-01-26 20:45:17] 2026-01-26 19:44:40,500 | INFO     | --- collectZombieJob: --- 10, [20078]
[2026-01-26 20:45:17] 2026-01-26 19:44:40,500 | INFO     | zombie collector waiting for pid 20078
[2026-01-26 20:45:17] 2026-01-26 19:44:40,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:45:17] 2026-01-26 19:44:40,500 | INFO     | collected zombie processes
[2026-01-26 20:45:17] 2026-01-26 19:44:40,500 | INFO     | will attempt to kill all subprocesses of pid=20078
[2026-01-26 20:45:17] 2026-01-26 19:44:40,593 | INFO     | process IDs to be killed: [20078] (in reverse order)
[2026-01-26 20:45:17] 2026-01-26 19:44:41,757 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:45:17] 2026-01-26 19:44:41,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:45:17] 2026-01-26 19:44:41,760 | INFO     | did not find any defunct processes belonging to 20078
[2026-01-26 20:45:17] 2026-01-26 19:44:41,761 | INFO     | did not find any defunct processes belonging to 20078
[2026-01-26 20:45:17] 2026-01-26 19:44:41,762 | INFO     | ready for new job
[2026-01-26 20:45:17] 2026-01-26 19:44:41,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:45:17] 2026-01-26 19:44:41,764 | INFO     | **************************************
[2026-01-26 20:45:17] 2026-01-26 19:44:41,764 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:45:17] 2026-01-26 19:44:41,764 | INFO     | **************************************
[2026-01-26 20:45:17] 2026-01-26 19:44:41,764 | INFO     | 
[2026-01-26 20:45:17] 2026-01-26 19:44:41,765 | INFO     | pilot is running in a VM
[2026-01-26 20:45:17] 2026-01-26 19:44:41,765 | INFO     | architecture information:
[2026-01-26 20:45:17] 2026-01-26 19:44:41,787 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:45:17] 2026-01-26 19:44:42,137 | INFO     | cat /etc/os-release:
[2026-01-26 20:45:17] NAME="CentOS Linux"
[2026-01-26 20:45:17] VERSION="7 (Core)"
[2026-01-26 20:45:17] ID="centos"
[2026-01-26 20:45:17] ID_LIKE="rhel fedora"
[2026-01-26 20:45:17] VERSION_ID="7"
[2026-01-26 20:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:45:17] ANSI_COLOR="0;31"
[2026-01-26 20:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:45:17] HOME_URL="https://www.centos.org/"
[2026-01-26 20:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:45:17] 
[2026-01-26 20:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:45:17] 
[2026-01-26 20:45:17] 2026-01-26 19:44:42,138 | INFO     | **************************************
[2026-01-26 20:45:17] 2026-01-26 19:44:42,641 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-26 20:45:17] 2026-01-26 19:44:42,952 | INFO     | sufficient remaining disk space (495457402880 B)
[2026-01-26 20:45:17] 2026-01-26 19:44:42,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:45:17] 2026-01-26 19:44:42,953 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:45:17] 2026-01-26 19:44:42,953 | INFO     | update_server=False
[2026-01-26 20:45:17] 2026-01-26 19:44:42,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:45:17] 2026-01-26 19:44:43,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:45:17] 2026-01-26 19:44:43,532 | INFO     | all job control threads have been joined
[2026-01-26 20:45:17] 2026-01-26 19:44:43,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:45:17] 2026-01-26 19:44:43,553 | INFO     | aborting loop
[2026-01-26 20:45:17] 2026-01-26 19:44:43,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:45:17] 2026-01-26 19:44:43,896 | INFO     | all data control threads have been joined
[2026-01-26 20:45:17] 2026-01-26 19:44:43,959 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:43,962 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:45:17] 2026-01-26 19:44:44,125 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,242 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,353 | INFO     | all payload control threads have been joined
[2026-01-26 20:45:17] 2026-01-26 19:44:44,538 | INFO     | [job] control thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,559 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,607 | INFO     | [job] validate thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,754 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,902 | INFO     | [data] control thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,935 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:44,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:45,226 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:45,262 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:45,359 | INFO     | [payload] control thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:46,026 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:44:47,038 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:45:17] 2026-01-26 19:45:05,783 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:45:17] 2026-01-26 19:45:06,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187848517440)>', '<ExcThread(monitor, started 140187547965184)>']
[2026-01-26 20:45:17] 2026-01-26 19:45:11,519 | INFO     | all workflow threads have been joined
[2026-01-26 20:45:17] 2026-01-26 19:45:11,519 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:45:17] 2026-01-26 19:45:11,519 | INFO     | traces error code: 0
[2026-01-26 20:45:17] 2026-01-26 19:45:11,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:45:17] 2026-01-26 19:45:12,201 | INFO     | PID=15644 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 20:45:17] 2026-01-26 19:45:12,201 | INFO     | .. there are 2 such processes running
[2026-01-26 20:45:17] 2026-01-26 19:45:12,201 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:45:17] 2026-01-26 19:45:12,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:45:17] 2026-01-26 19:45:12,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:45:17] 2026-01-26 19:45:12,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:45:17] 2026-01-26 19:45:12,202 | CRITICAL | thread 'MainThread' is not alive
[2026-01-26 20:45:17] 2026-01-26 19:45:12,202 | INFO     | [monitor] control thread has ended
[2026-01-26 20:45:17] 2026-01-26 19:45:12,678 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:45:17] 2026-01-26 19:45:12,729 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:45:17] 2026-01-26 19:45:12,859 [wrapper] pilotpid: 15644
[2026-01-26 20:45:17] 2026-01-26 19:45:12,991 [wrapper] Pilot exit status: 0
[2026-01-26 20:45:17] 2026-01-26 19:45:13,399 [wrapper] pandaids: 6983772632
[2026-01-26 20:45:17] 2026-01-26 19:45:14,396 [wrapper] cleanup supervisor_pilot 26153 15645
[2026-01-26 20:45:17] 2026-01-26 19:45:14,467 [wrapper] Test setup, not cleaning
[2026-01-26 20:45:17] 2026-01-26 19:45:14,528 [wrapper] apfmon messages muted
[2026-01-26 20:45:17] 2026-01-26 19:45:14,586 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:45:17] 2026-01-26 19:45:14,699 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:45:17]  *** Error codes and diagnostics ***
[2026-01-26 20:45:17]     "exeErrorCode": 0,
[2026-01-26 20:45:17]     "exeErrorDiag": "",
[2026-01-26 20:45:17]     "pilotErrorCode": 0,
[2026-01-26 20:45:17]     "pilotErrorDiag": "",
[2026-01-26 20:45:17]  *** Listing of results directory ***
[2026-01-26 20:45:17] total 677212
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-26 20:45:17] -rwx------. 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc       100 Jan 26 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:45:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 16:47 run_atlas
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc       105 Jan 26 16:47 job.xml
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc      6392 Jan 26 16:47 init_data.xml
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc 501471148 Jan 26 16:47 EVNT.48317869._000038.pool.root.1
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc     15845 Jan 26 16:47 start_atlas.sh
[2026-01-26 20:45:17] drwxrwx--x. 2 boinc boinc        68 Jan 26 16:47 shared
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc    597753 Jan 26 16:47 input.tar.gz
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc         0 Jan 26 16:47 boinc_lockfile
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc      2513 Jan 26 16:47 pandaJob.out
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc       415 Jan 26 16:53 workernode_map.json
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc   1002189 Jan 26 16:53 agis_schedconf.cvmfs.json
[2026-01-26 20:45:17] drwx------. 5 boinc boinc      4096 Jan 26 16:53 pilot3
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc 183198540 Jan 26 20:43 HITS.48317872._001887.pool.root.1
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc       531 Jan 26 20:43 boinc_task_state.xml
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc        95 Jan 26 20:44 pilot_heartbeat.json
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc      1012 Jan 26 20:44 memory_monitor_summary.json
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc   1516246 Jan 26 20:44 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc    473587 Jan 26 20:44 log.48317872._001887.job.log.tgz.1
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc      6317 Jan 26 20:44 heartbeat.json
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc      8192 Jan 26 20:45 boinc_mmap_file
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc        28 Jan 26 20:45 wrapper_checkpoint.txt
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc       890 Jan 26 20:45 pilotlog.txt
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc   1962193 Jan 26 20:45 log.48317872._001887.job.log.1
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc       357 Jan 26 20:45 output.list
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc       620 Jan 26 20:45 runtime_log
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc   2457600 Jan 26 20:45 result.tar.gz
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc      8832 Jan 26 20:45 runtime_log.err
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc       656 Jan 26 20:45 12rMDmwHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqK2KDmt6TtWm.diag
[2026-01-26 20:45:17] -rw-r--r--. 1 boinc boinc     20753 Jan 26 20:45 stderr.txt
[2026-01-26 20:45:17] HITS file was successfully produced:
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc 183198540 Jan 26 20:43 shared/HITS.pool.root.1
[2026-01-26 20:45:17]  *** Contents of shared directory: ***
[2026-01-26 20:45:17] total 671628
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc 501471148 Jan 26 16:47 ATLAS.root_0
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc     15845 Jan 26 16:47 start_atlas.sh
[2026-01-26 20:45:17] -rw-r--r--. 2 boinc boinc    597753 Jan 26 16:47 input.tar.gz
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc 183198540 Jan 26 20:43 HITS.pool.root.1
[2026-01-26 20:45:17] -rw-------. 1 boinc boinc   2457600 Jan 26 20:45 result.tar.gz
20:45:19 (11668): run_atlas exited; CPU time 51604.260338
20:45:19 (11668): called boinc_finish(0)

</stderr_txt>
]]>

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