Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:48 (1330215): wrapper (7.7.26015): starting
19:27:48 (1330215): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 19:27:48] Arguments: --nthreads 3
[2026-01-26 19:27:48] Threads: 3
[2026-01-26 19:27:48] Checking for CVMFS
[2026-01-26 19:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:27:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:27:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:27:48] 2.9.2.0 17625 8582 90100 155556 1 49 26461375 36864000 0 130560 0 3791689 99.987 273776 4473 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 19:27:48] CVMFS is ok
[2026-01-26 19:27:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:27:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:27:48] Further information can be found at the LHC@home message board.
[2026-01-26 19:27:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:27:48] Checking for apptainer binary...
[2026-01-26 19:27:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:27:48] Running /usr/bin/apptainer --version
[2026-01-26 19:27:48] apptainer version 1.4.1-1.1
[2026-01-26 19:27:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:27:48] atlasA217a
[2026-01-26 19:27:48] apptainer works
[2026-01-26 19:27:48] Set ATHENA_PROC_NUMBER=3
[2026-01-26 19:27:48] Set ATHENA_CORE_NUMBER=3
[2026-01-26 19:27:48] Starting ATLAS job with PandaID=6983772631
[2026-01-26 19:27:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:01:17 (1343748): wrapper (7.7.26015): starting
20:01:17 (1343748): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 20:01:17] Arguments: --nthreads 3
[2026-01-26 20:01:17] Threads: 3
[2026-01-26 20:01:17] This job has been restarted, cleaning up previous attempt
[2026-01-26 20:01:17] Checking for CVMFS
[2026-01-26 20:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:01:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:01:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:01:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:01:18] 2.9.2.0 1343873 0 29652 155556 4 1 26465944 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 20:01:18] CVMFS is ok
[2026-01-26 20:01:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:01:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:01:18] Further information can be found at the LHC@home message board.
[2026-01-26 20:01:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:01:18] Checking for apptainer binary...
[2026-01-26 20:01:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:01:18] Running /usr/bin/apptainer --version
[2026-01-26 20:01:18] apptainer version 1.4.1-1.1
[2026-01-26 20:01:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:01:18] atlasA217a
[2026-01-26 20:01:18] apptainer works
[2026-01-26 20:01:18] Set ATHENA_PROC_NUMBER=3
[2026-01-26 20:01:18] Set ATHENA_CORE_NUMBER=3
[2026-01-26 20:01:18] Starting ATLAS job with PandaID=6983772631
[2026-01-26 20:01:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:24:37]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:24:37]  direct_access_lan=False
[2026-01-26 21:24:37]  direct_access_wan=False
[2026-01-26 21:24:37]  domain=
[2026-01-26 21:24:37]  filesize=264075
[2026-01-26 21:24:37]  filetype=log
[2026-01-26 21:24:37]  guid=22177ecf-0b3a-47bc-8b03-2ec1e3426990
[2026-01-26 21:24:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 21:24:37]  is_altstaged=None
[2026-01-26 21:24:37]  is_tar=False
[2026-01-26 21:24:37]  lfn=log.48317872._001886.job.log.tgz.1
[2026-01-26 21:24:37]  mtime=0
[2026-01-26 21:24:37]  protocol_id=None
[2026-01-26 21:24:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:24:37]  replicas=None
[2026-01-26 21:24:37]  scope=mc23_13p6TeV
[2026-01-26 21:24:37]  status=None
[2026-01-26 21:24:37]  status_code=0
[2026-01-26 21:24:37]  storage_token=
[2026-01-26 21:24:37]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983772631/log.48317872._001886.job.log.tgz.1
[2026-01-26 21:24:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/5d/log.48317872._001886.job.log.tgz.1
[2026-01-26 21:24:37]  workdir=None
[2026-01-26 21:24:37] ]
[2026-01-26 21:24:37] 2026-01-26 20:23:56,639 | INFO     | transferring file log.48317872._001886.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983772631/log.48317872._001886.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 21:24:37] 2026-01-26 20:23:56,639 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983772631/log.48317872._001886.job.log.tgz.1 /local/data/boinc/slots/0/log.48317872._0018
[2026-01-26 21:24:37] 2026-01-26 20:23:56,652 | INFO     | adding to output.list: log.48317872._001886.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/5d/log.48317872._001886.job.log.tg
[2026-01-26 21:24:37] 2026-01-26 20:23:56,652 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:24:37] 2026-01-26 20:23:56,652 | INFO     | summary of transferred files:
[2026-01-26 21:24:37] 2026-01-26 20:23:56,652 | INFO     |  -- lfn=log.48317872._001886.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:24:37] 2026-01-26 20:23:56,652 | INFO     | stage-out finished correctly
[2026-01-26 21:24:37] 2026-01-26 20:23:56,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:24:37] 2026-01-26 20:23:57,593 | INFO     | PID=1347954 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:24:37] 2026-01-26 20:23:57,603 | INFO     | job 6983772631 has state=finished
[2026-01-26 21:24:37] 2026-01-26 20:23:57,604 | INFO     | preparing for final server update for job 6983772631 in state='finished'
[2026-01-26 21:24:37] 2026-01-26 20:23:57,604 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983772631/jobReport.json
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | job 6983772631 has finished - writing final server update
[2026-01-26 21:24:37] 2026-01-26 20:23:57,605 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,606 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983772631/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | INFO     | extracted standard info from prmon json
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:24:37] 2026-01-26 20:23:57,607 | INFO     | sum of square deviations: 125630262.5
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | sum of deviations: -1492831833.0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | mean x: 1769456632.5
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | mean y: 2363793.864864865
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | intersect: 21028358132.68098
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | chi2: 0.07067046868947555
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | current memory leak: -11.88 B/s (using 74 data points, chi2=0.07)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | could have reported an average CPU frequency of 3535 MHz (6 samples)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | ..............................
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . Timing measurements:
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . get job = 0 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . initial setup = 0 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . payload setup = 2 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . stage-in = 0 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . payload execution = 4933 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . stage-out = 0 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | . log creation = 0 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,608 | INFO     | ..............................
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | 
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | job summary report
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | --------------------------------------------------
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | PanDA job id: 6983772631
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | task id: 48317872
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | errors: (none)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | pilot state: finished 
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | transexitcode: 0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | exeerrorcode: 0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | exeerrordiag: 
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | exitcode: 0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | exitmsg: OK
[2026-01-26 21:24:37] 2026-01-26 20:23:57,636 | INFO     | cpuconsumptiontime: 14210 s
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | nevents: 400
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | neventsw: 0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | pid: 1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | pgrp: 1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | corecount: 3
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | event service: False
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | sizes: {0: 2284233, 11: 2284233, 4939: 2310640, 4940: 2319700, 4941: 2319838}
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | --------------------------------------------------
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | 
[2026-01-26 21:24:37] 2026-01-26 20:23:57,637 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | job 6983772631 has completed (purged errors)
[2026-01-26 21:24:37] 2026-01-26 20:23:57,649 | INFO     | overall cleanup function is called
[2026-01-26 21:24:37] 2026-01-26 20:23:58,655 | INFO     | --- collectZombieJob: --- 10, [1350355]
[2026-01-26 21:24:37] 2026-01-26 20:23:58,656 | INFO     | zombie collector waiting for pid 1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:58,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:24:37] 2026-01-26 20:23:58,656 | INFO     | collected zombie processes
[2026-01-26 21:24:37] 2026-01-26 20:23:58,656 | INFO     | will attempt to kill all subprocesses of pid=1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:58,699 | INFO     | process IDs to be killed: [1350355] (in reverse order)
[2026-01-26 21:24:37] 2026-01-26 20:23:58,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:24:37] 2026-01-26 20:23:58,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:24:37] 2026-01-26 20:23:58,724 | INFO     | did not find any defunct processes belonging to 1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:58,725 | INFO     | did not find any defunct processes belonging to 1350355
[2026-01-26 21:24:37] 2026-01-26 20:23:58,725 | INFO     | ready for new job
[2026-01-26 21:24:37] 2026-01-26 20:23:58,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | **************************************
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | **************************************
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | 
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | architecture information:
[2026-01-26 21:24:37] 2026-01-26 20:23:58,726 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:24:37] 2026-01-26 20:23:58,735 | INFO     | cat /etc/os-release:
[2026-01-26 21:24:37] NAME="CentOS Linux"
[2026-01-26 21:24:37] VERSION="7 (Core)"
[2026-01-26 21:24:37] ID="centos"
[2026-01-26 21:24:37] ID_LIKE="rhel fedora"
[2026-01-26 21:24:37] VERSION_ID="7"
[2026-01-26 21:24:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:24:37] ANSI_COLOR="0;31"
[2026-01-26 21:24:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:24:37] HOME_URL="https://www.centos.org/"
[2026-01-26 21:24:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:24:37] 
[2026-01-26 21:24:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:24:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:24:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:24:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:24:37] 
[2026-01-26 21:24:37] 2026-01-26 20:23:58,735 | INFO     | **************************************
[2026-01-26 21:24:37] 2026-01-26 20:23:59,238 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 21:24:37] 2026-01-26 20:23:59,252 | INFO     | sufficient remaining disk space (331312267264 B)
[2026-01-26 21:24:37] 2026-01-26 20:23:59,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:24:37] 2026-01-26 20:23:59,252 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:24:37] 2026-01-26 20:23:59,252 | INFO     | update_server=False
[2026-01-26 21:24:37] 2026-01-26 20:23:59,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:24:37] 2026-01-26 20:23:59,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:24:37] 2026-01-26 20:23:59,254 | INFO     | all job control threads have been joined
[2026-01-26 21:24:37] 2026-01-26 20:23:59,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:24:37] 2026-01-26 20:23:59,516 | INFO     | aborting loop
[2026-01-26 21:24:37] 2026-01-26 20:23:59,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:24:37] 2026-01-26 20:23:59,760 | INFO     | all payload control threads have been joined
[2026-01-26 21:24:37] 2026-01-26 20:23:59,832 | INFO     | all data control threads have been joined
[2026-01-26 21:24:37] 2026-01-26 20:24:00,258 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,258 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,259 | INFO     | [job] control thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,355 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,521 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,721 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,766 | INFO     | [payload] control thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:00,838 | INFO     | [data] control thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,172 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,501 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,648 | INFO     | [job] validate thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,694 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,729 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:01,743 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:02,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:24:37] 2026-01-26 20:24:06,719 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:10,033 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:24:37] 2026-01-26 20:24:11,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:24:37] 2026-01-26 20:24:29,697 | INFO     | PID=1347954 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:24:37] 2026-01-26 20:24:29,697 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:24:37] 2026-01-26 20:24:29,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:24:37] 2026-01-26 20:24:29,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:24:37] 2026-01-26 20:24:30,971 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:24:37] 2026-01-26 20:24:32,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890376619840)>', '<ExcThread(monitor, started 139889744004864)>']
[2026-01-26 21:24:37] 2026-01-26 20:24:32,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:24:37] 2026-01-26 20:24:32,713 | INFO     | [monitor] control thread has ended
[2026-01-26 21:24:37] 2026-01-26 20:24:37,183 | INFO     | all workflow threads have been joined
[2026-01-26 21:24:37] 2026-01-26 20:24:37,183 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:24:37] 2026-01-26 20:24:37,184 | INFO     | traces error code: 0
[2026-01-26 21:24:37] 2026-01-26 20:24:37,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:24:37] 2026-01-26 20:24:37,236 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:24:37] 2026-01-26 20:24:37,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:24:37] 2026-01-26 20:24:37,240 [wrapper] pilotpid: 1347954
[2026-01-26 21:24:37] 2026-01-26 20:24:37,243 [wrapper] Pilot exit status: 0
[2026-01-26 21:24:37] 2026-01-26 20:24:37,249 [wrapper] pandaids: 6983772631 6983772631
[2026-01-26 21:24:37] 2026-01-26 20:24:37,265 [wrapper] cleanup supervisor_pilot 1355433 1347955
[2026-01-26 21:24:37] 2026-01-26 20:24:37,267 [wrapper] Test setup, not cleaning
[2026-01-26 21:24:37] 2026-01-26 20:24:37,270 [wrapper] apfmon messages muted
[2026-01-26 21:24:37] 2026-01-26 20:24:37,272 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:24:37] 2026-01-26 20:24:37,274 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:24:37]  *** Error codes and diagnostics ***
[2026-01-26 21:24:37]     "exeErrorCode": 0,
[2026-01-26 21:24:37]     "exeErrorDiag": "",
[2026-01-26 21:24:37]     "pilotErrorCode": 0,
[2026-01-26 21:24:37]     "pilotErrorDiag": "",
[2026-01-26 21:24:37]  *** Listing of results directory ***
[2026-01-26 21:24:37] total 1165868
[2026-01-26 21:24:37] drwx------ 5 boinc boinc      4096 Jan 14 11:00 pilot3
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-26 21:24:37] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:24:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:27 run_atlas
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:27 job.xml
[2026-01-26 21:24:37] -rw-r--r-- 3 boinc boinc 501471148 Jan 26 19:27 EVNT.48317869._000038.pool.root.1
[2026-01-26 21:24:37] -rw-r--r-- 3 boinc boinc 501471148 Jan 26 19:27 ATLAS.root_0
[2026-01-26 21:24:37] -rw-r--r-- 2 boinc boinc    597756 Jan 26 19:27 input.tar.gz
[2026-01-26 21:24:37] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:27 start_atlas.sh
[2026-01-26 21:24:37] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:27 shared
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:27 boinc_setup_complete
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:27 boinc_lockfile
[2026-01-26 21:24:37] -rw------- 1 boinc boinc   1516246 Jan 26 19:27 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc      6448 Jan 26 20:01 init_data.xml
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc      2513 Jan 26 20:01 pandaJob.out
[2026-01-26 21:24:37] -rw------- 1 boinc boinc   1006384 Jan 26 20:01 agis_schedconf.cvmfs.json
[2026-01-26 21:24:37] -rw------- 1 boinc boinc       431 Jan 26 20:01 workernode_map.json
[2026-01-26 21:24:37] -rw------- 1 boinc boinc 184985026 Jan 26 21:23 HITS.48317872._001886.pool.root.1
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc       530 Jan 26 21:23 boinc_task_state.xml
[2026-01-26 21:24:37] -rw------- 1 boinc boinc        97 Jan 26 21:23 pilot_heartbeat.json
[2026-01-26 21:24:37] -rw------- 1 boinc boinc      1018 Jan 26 21:23 memory_monitor_summary.json
[2026-01-26 21:24:37] -rw------- 1 boinc boinc    264075 Jan 26 21:23 log.48317872._001886.job.log.tgz.1
[2026-01-26 21:24:37] -rw------- 1 boinc boinc      6320 Jan 26 21:23 heartbeat.json
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:24 boinc_mmap_file
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc        27 Jan 26 21:24 wrapper_checkpoint.txt
[2026-01-26 21:24:37] -rw------- 1 boinc boinc      4820 Jan 26 21:24 pilotlog.txt
[2026-01-26 21:24:37] -rw------- 1 boinc boinc    724095 Jan 26 21:24 log.48317872._001886.job.log.1
[2026-01-26 21:24:37] -rw------- 1 boinc boinc       357 Jan 26 21:24 output.list
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:24 runtime_log
[2026-01-26 21:24:37] -rw------- 1 boinc boinc   1003520 Jan 26 21:24 result.tar.gz
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc      9001 Jan 26 21:24 runtime_log.err
[2026-01-26 21:24:37] -rw------- 1 boinc boinc       786 Jan 26 21:24 kgoMDmwHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpK2KDm3FzMUn.diag
[2026-01-26 21:24:37] -rw-r--r-- 1 boinc boinc     23155 Jan 26 21:24 stderr.txt
[2026-01-26 21:24:37] HITS file was successfully produced:
[2026-01-26 21:24:37] -rw------- 1 boinc boinc 184985026 Jan 26 21:23 shared/HITS.pool.root.1
[2026-01-26 21:24:37]  *** Contents of shared directory: ***
[2026-01-26 21:24:37] total 671960
[2026-01-26 21:24:37] -rw-r--r-- 3 boinc boinc 501471148 Jan 26 19:27 ATLAS.root_0
[2026-01-26 21:24:37] -rw-r--r-- 2 boinc boinc    597756 Jan 26 19:27 input.tar.gz
[2026-01-26 21:24:37] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:27 start_atlas.sh
[2026-01-26 21:24:37] -rw------- 1 boinc boinc 184985026 Jan 26 21:23 HITS.pool.root.1
[2026-01-26 21:24:37] -rw------- 1 boinc boinc   1003520 Jan 26 21:24 result.tar.gz
21:24:38 (1343748): run_atlas exited; CPU time 14233.734603
21:24:38 (1343748): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN