Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:20:22 (1024636): wrapper (7.7.26015): starting
00:20:22 (1024636): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 00:20:22] Arguments: --nthreads 12
[2026-01-27 00:20:22] Threads: 12
[2026-01-27 00:20:22] Checking for CVMFS
[2026-01-27 00:20:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:20:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:20:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:20:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:20:27] 2.13.1.0 2787 1965 64208 155567 2 50 2162015 4096001 1824 130560 0 3016928 99.993 80017 805 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 00:20:27] CVMFS is ok
[2026-01-27 00:20:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:20:27] Checking for apptainer binary...
[2026-01-27 00:20:27] apptainer is not installed, using version from CVMFS
[2026-01-27 00:20:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:20:29] ryzen7
[2026-01-27 00:20:29] apptainer works
[2026-01-27 00:20:29] Set ATHENA_PROC_NUMBER=12
[2026-01-27 00:20:29] Set ATHENA_CORE_NUMBER=12
[2026-01-27 00:20:29] Starting ATLAS job with PandaID=6983772641
[2026-01-27 00:20:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:42:15]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:42:15]  mtime=0
[2026-01-27 01:42:15]  protocol_id=None
[2026-01-27 01:42:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 01:42:15]  replicas=None
[2026-01-27 01:42:15]  scope=mc23_13p6TeV
[2026-01-27 01:42:15]  status=None
[2026-01-27 01:42:15]  status_code=0
[2026-01-27 01:42:15]  storage_token=
[2026-01-27 01:42:15]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/log.48317872._001896.job.log.tgz.1
[2026-01-27 01:42:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/27/log.48317872._001896.job.log.tgz.1
[2026-01-27 01:42:15]  workdir=None
[2026-01-27 01:42:15] ]
[2026-01-27 01:42:15] 2026-01-27 01:41:40,755 | INFO     | transferring file log.48317872._001896.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/log.48317872._001896.job.log.tgz.1 t
[2026-01-27 01:42:15] 2026-01-27 01:41:40,755 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/log.48317872._001896.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-27 01:42:15] 2026-01-27 01:41:40,814 | INFO     | adding to output.list: log.48317872._001896.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/27/log.48317872._001896.job.log.tg
[2026-01-27 01:42:15] 2026-01-27 01:41:40,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 01:42:15] 2026-01-27 01:41:40,814 | INFO     | summary of transferred files:
[2026-01-27 01:42:15] 2026-01-27 01:41:40,814 | INFO     |  -- lfn=log.48317872._001896.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 01:42:15] 2026-01-27 01:41:40,815 | INFO     | stage-out finished correctly
[2026-01-27 01:42:15] 2026-01-27 01:41:40,935 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 01:42:15] 2026-01-27 01:41:41,064 | INFO     | job 6983772641 has state=finished
[2026-01-27 01:42:15] 2026-01-27 01:41:41,064 | INFO     | preparing for final server update for job 6983772641 in state='finished'
[2026-01-27 01:42:15] 2026-01-27 01:41:41,065 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/jobReport.json
[2026-01-27 01:42:15] 2026-01-27 01:41:41,070 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/0/workernode_map.json
[2026-01-27 01:42:15] 2026-01-27 01:41:41,070 | INFO     | this job has now completed (state=finished)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,070 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,070 | INFO     | log transfer has been attempted: DONE
[2026-01-27 01:42:15] 2026-01-27 01:41:41,070 | INFO     | job 6983772641 has finished - writing final server update
[2026-01-27 01:42:15] 2026-01-27 01:41:41,071 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | INFO     | extracted standard info from prmon json
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:42:15] 2026-01-27 01:41:41,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:42:15] 2026-01-27 01:41:41,093 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:42:15] 2026-01-27 01:41:41,093 | INFO     | sum of square deviations: 101843770.0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | sum of deviations: -8437361034.000001
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | mean x: 1769475842.0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | mean y: 2833820.3913043477
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | intersect: 146597039041.7332
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | chi2: 0.029940235704506754
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | current memory leak: -82.85 B/s (using 69 data points, chi2=0.03)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | could have reported an average CPU frequency of 4316 MHz (6 samples)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | ..............................
[2026-01-27 01:42:15] 2026-01-27 01:41:41,098 | INFO     | . Timing measurements:
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . get job = 0 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . initial setup = 51 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . payload setup = 57 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . stage-in = 0 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . payload execution = 4671 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . stage-out = 1 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | . log creation = 0 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,099 | INFO     | ..............................
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | 
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | job summary report
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | --------------------------------------------------
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | PanDA job id: 6983772641
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | task id: 48317872
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | errors: (none)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | pilot state: finished 
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | transexitcode: 0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | exeerrorcode: 0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | exeerrordiag: 
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | exitcode: 0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | exitmsg: OK
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | cpuconsumptiontime: 24282 s
[2026-01-27 01:42:15] 2026-01-27 01:41:41,334 | INFO     | nevents: 400
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | neventsw: 0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | pid: 1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | pgrp: 1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | corecount: 12
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | event service: False
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | sizes: {0: 2283142, 1: 2284283, 2: 2284283, 4732: 2310443, 4735: 2319681}
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | --------------------------------------------------
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | 
[2026-01-27 01:42:15] 2026-01-27 01:41:41,335 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | job 6983772641 has completed (purged errors)
[2026-01-27 01:42:15] 2026-01-27 01:41:41,379 | INFO     | overall cleanup function is called
[2026-01-27 01:42:15] 2026-01-27 01:41:42,386 | INFO     | --- collectZombieJob: --- 10, [1033231]
[2026-01-27 01:42:15] 2026-01-27 01:41:42,386 | INFO     | zombie collector waiting for pid 1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:42,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:42:15] 2026-01-27 01:41:42,386 | INFO     | collected zombie processes
[2026-01-27 01:42:15] 2026-01-27 01:41:42,386 | INFO     | will attempt to kill all subprocesses of pid=1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:42,524 | INFO     | process IDs to be killed: [1033231] (in reverse order)
[2026-01-27 01:42:15] 2026-01-27 01:41:42,622 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:42:15] 2026-01-27 01:41:42,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:42:15] 2026-01-27 01:41:42,624 | INFO     | did not find any defunct processes belonging to 1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:42,626 | INFO     | did not find any defunct processes belonging to 1033231
[2026-01-27 01:42:15] 2026-01-27 01:41:42,630 | INFO     | ready for new job
[2026-01-27 01:42:15] 2026-01-27 01:41:42,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:42:15] 2026-01-27 01:41:42,631 | INFO     | **************************************
[2026-01-27 01:42:15] 2026-01-27 01:41:42,631 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:42:15] 2026-01-27 01:41:42,631 | INFO     | **************************************
[2026-01-27 01:42:15] 2026-01-27 01:41:42,631 | INFO     | 
[2026-01-27 01:42:15] 2026-01-27 01:41:42,658 | INFO     | architecture information:
[2026-01-27 01:42:15] 2026-01-27 01:41:42,662 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:42:15] 2026-01-27 01:41:42,686 | INFO     | cat /etc/os-release:
[2026-01-27 01:42:15] NAME="CentOS Linux"
[2026-01-27 01:42:15] VERSION="7 (Core)"
[2026-01-27 01:42:15] ID="centos"
[2026-01-27 01:42:15] ID_LIKE="rhel fedora"
[2026-01-27 01:42:15] VERSION_ID="7"
[2026-01-27 01:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:42:15] ANSI_COLOR="0;31"
[2026-01-27 01:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:42:15] HOME_URL="https://www.centos.org/"
[2026-01-27 01:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:42:15] 
[2026-01-27 01:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:42:15] 
[2026-01-27 01:42:15] 2026-01-27 01:41:42,686 | INFO     | **************************************
[2026-01-27 01:42:15] 2026-01-27 01:41:42,702 | WARNING  | process 1033231 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 01:42:15] 2026-01-27 01:41:42,803 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:42:15] 2026-01-27 01:41:42,804 | INFO     | skipping file size check of payload stdout file (/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/payload.stdout) since it has not been created
[2026-01-27 01:42:15] 2026-01-27 01:41:42,804 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-27 01:42:15] 2026-01-27 01:41:42,906 | INFO     | sufficient remaining disk space (164211195904 B)
[2026-01-27 01:42:15] 2026-01-27 01:41:42,906 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 01:42:15] 2026-01-27 01:41:42,906 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983772641/HITS.48317872._001896.pool.root.1 since it does n
[2026-01-27 01:42:15] 2026-01-27 01:41:43,028 | INFO     | number of running child processes to parent process 1033231: 1
[2026-01-27 01:42:15] 2026-01-27 01:41:43,029 | INFO     | maximum number of monitored processes: 6
[2026-01-27 01:42:15] 2026-01-27 01:41:43,029 | INFO     | aborting job monitoring since job object (job id=6983772641) has expired
[2026-01-27 01:42:15] 2026-01-27 01:41:43,190 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-27 01:42:15] 2026-01-27 01:41:43,242 | INFO     | sufficient remaining disk space (164211195904 B)
[2026-01-27 01:42:15] 2026-01-27 01:41:43,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:42:15] 2026-01-27 01:41:43,243 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:42:15] 2026-01-27 01:41:43,243 | INFO     | update_server=False
[2026-01-27 01:42:15] 2026-01-27 01:41:43,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:42:15] 2026-01-27 01:41:43,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:42:15] 2026-01-27 01:41:43,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:42:15] 2026-01-27 01:41:43,246 | INFO     | will abort loop
[2026-01-27 01:42:15] 2026-01-27 01:41:43,510 | INFO     | all data control threads have been joined
[2026-01-27 01:42:15] 2026-01-27 01:41:43,926 | INFO     | all payload control threads have been joined
[2026-01-27 01:42:15] 2026-01-27 01:41:43,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:42:15] 2026-01-27 01:41:44,202 | INFO     | all job control threads have been joined
[2026-01-27 01:42:15] 2026-01-27 01:41:44,247 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,254 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,260 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,290 | INFO     | [job] validate thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,518 | INFO     | [data] control thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,654 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,790 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,854 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,934 | INFO     | [payload] control thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:44,978 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:45,102 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:45,210 | INFO     | [job] control thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:45,262 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:45,960 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:46,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:42:15] 2026-01-27 01:41:47,254 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:47,262 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:42:15] 2026-01-27 01:41:51,770 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:42:15] 2026-01-27 01:41:52,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605832091456)>', '<ExcThread(monitor, started 140605409715968)>']
[2026-01-27 01:42:15] 2026-01-27 01:41:57,806 | INFO     | all workflow threads have been joined
[2026-01-27 01:42:15] 2026-01-27 01:41:57,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:42:15] 2026-01-27 01:41:57,806 | INFO     | traces error code: 0
[2026-01-27 01:42:15] 2026-01-27 01:41:57,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:42:15] 2026-01-27 01:42:13,803 | INFO     | PID=1028741 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | INFO     | .. there are 3 such processes running
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 01:42:15] 2026-01-27 01:42:13,804 | INFO     | [monitor] control thread has ended
[2026-01-27 01:42:15] 2026-01-27 01:42:13,958 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:42:15] 2026-01-27 01:42:13,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:42:15] 2026-01-27 01:42:14,042 [wrapper] pilotpid: 1028741
[2026-01-27 01:42:15] 2026-01-27 01:42:14,059 [wrapper] Pilot exit status: 0
[2026-01-27 01:42:15] 2026-01-27 01:42:14,250 [wrapper] pandaids: 6983772641
[2026-01-27 01:42:15] 2026-01-27 01:42:14,418 [wrapper] cleanup supervisor_pilot 1052172 1028742
[2026-01-27 01:42:15] 2026-01-27 01:42:14,470 [wrapper] Test setup, not cleaning
[2026-01-27 01:42:15] 2026-01-27 01:42:14,514 [wrapper] apfmon messages muted
[2026-01-27 01:42:15] 2026-01-27 01:42:14,566 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:42:15] 2026-01-27 01:42:14,614 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:42:15]  *** Error codes and diagnostics ***
[2026-01-27 01:42:15]     "exeErrorCode": 0,
[2026-01-27 01:42:15]     "exeErrorDiag": "",
[2026-01-27 01:42:15]     "pilotErrorCode": 0,
[2026-01-27 01:42:15]     "pilotErrorDiag": "",
[2026-01-27 01:42:15]  *** Listing of results directory ***
[2026-01-27 01:42:15] total 675772
[2026-01-27 01:42:15] -rw-r--r-- 1 boinc boinc    584422 Jan 26 03:16 pilot3.tar.gz
[2026-01-27 01:42:15] -rw-r--r-- 1 boinc boinc      5111 Jan 26 03:17 queuedata.json
[2026-01-27 01:42:15] -rwx------ 1 boinc boinc     36322 Jan 26 03:17 runpilot2-wrapper.sh
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc       100 Jan 27 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:42:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 00:20 run_atlas
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc       105 Jan 27 00:20 job.xml
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc 501471148 Jan 27 00:20 EVNT.48317869._000038.pool.root.1
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc     15845 Jan 27 00:20 start_atlas.sh
[2026-01-27 01:42:15] drwxrwx--x 2 boinc boinc      4096 Jan 27 00:20 shared
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc    597757 Jan 27 00:20 input.tar.gz
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc      6934 Jan 27 00:20 init_data.xml
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc         0 Jan 27 00:20 boinc_setup_complete
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc         0 Jan 27 00:20 boinc_lockfile
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc      2514 Jan 27 00:20 pandaJob.out
[2026-01-27 01:42:15] -rw------- 1 boinc boinc   1006441 Jan 27 00:21 agis_schedconf.cvmfs.json
[2026-01-27 01:42:15] -rw------- 1 boinc boinc   1516246 Jan 27 00:21 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:42:15] -rw------- 1 boinc boinc       420 Jan 27 00:22 workernode_map.json
[2026-01-27 01:42:15] drwx------ 5 boinc boinc      4096 Jan 27 00:22 pilot3
[2026-01-27 01:42:15] -rw------- 1 boinc boinc 184316803 Jan 27 01:41 HITS.48317872._001896.pool.root.1
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc       530 Jan 27 01:41 boinc_task_state.xml
[2026-01-27 01:42:15] -rw------- 1 boinc boinc      1017 Jan 27 01:41 memory_monitor_summary.json
[2026-01-27 01:42:15] -rw------- 1 boinc boinc    410277 Jan 27 01:41 log.48317872._001896.job.log.tgz.1
[2026-01-27 01:42:15] -rw------- 1 boinc boinc      6286 Jan 27 01:41 heartbeat.json
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 01:41 boinc_mmap_file
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc        27 Jan 27 01:41 wrapper_checkpoint.txt
[2026-01-27 01:42:15] -rw------- 1 boinc boinc       892 Jan 27 01:42 pilotlog.txt
[2026-01-27 01:42:15] -rw------- 1 boinc boinc        95 Jan 27 01:42 pilot_heartbeat.json
[2026-01-27 01:42:15] -rw------- 1 boinc boinc    721382 Jan 27 01:42 log.48317872._001896.job.log.1
[2026-01-27 01:42:15] -rw------- 1 boinc boinc       357 Jan 27 01:42 output.list
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc       620 Jan 27 01:42 runtime_log
[2026-01-27 01:42:15] -rw------- 1 boinc boinc   1146880 Jan 27 01:42 result.tar.gz
[2026-01-27 01:42:15] -rw------- 1 boinc boinc       648 Jan 27 01:42 skPKDmxHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjt8KDmHYSN2n.diag
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc      9156 Jan 27 01:42 runtime_log.err
[2026-01-27 01:42:15] -rw-rw-r-- 1 boinc boinc     21760 Jan 27 01:42 stderr.txt
[2026-01-27 01:42:15] HITS file was successfully produced:
[2026-01-27 01:42:15] -rw------- 1 boinc boinc 184316803 Jan 27 01:41 shared/HITS.pool.root.1
[2026-01-27 01:42:15]  *** Contents of shared directory: ***
[2026-01-27 01:42:15] total 671448
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc 501471148 Jan 27 00:20 ATLAS.root_0
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc     15845 Jan 27 00:20 start_atlas.sh
[2026-01-27 01:42:15] -rw-r--r-- 2 boinc boinc    597757 Jan 27 00:20 input.tar.gz
[2026-01-27 01:42:15] -rw------- 1 boinc boinc 184316803 Jan 27 01:41 HITS.pool.root.1
[2026-01-27 01:42:15] -rw------- 1 boinc boinc   1146880 Jan 27 01:42 result.tar.gz
01:42:17 (1024636): run_atlas exited; CPU time 24306.859576
01:42:17 (1024636): called boinc_finish(0)

</stderr_txt>
]]>

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