Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:01:50 (1228468): wrapper (7.7.26015): starting
21:01:50 (1228468): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 21:01:50] Arguments: --nthreads 4
[2026-01-26 21:01:50] Threads: 4
[2026-01-26 21:01:50] Checking for CVMFS
[2026-01-26 21:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:01:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:01:50] 2.9.2.0 3657875 8834 107176 155560 1 50 22220312 36864000 0 130560 0 4987740 99.989 287717 5962 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 21:01:50] CVMFS is ok
[2026-01-26 21:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 21:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 21:01:50] Further information can be found at the LHC@home message board.
[2026-01-26 21:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:01:50] Checking for apptainer binary...
[2026-01-26 21:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:01:50] Running /usr/bin/apptainer --version
[2026-01-26 21:01:50] apptainer version 1.4.1-1.1
[2026-01-26 21:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:01:50] magicA244a
[2026-01-26 21:01:50] apptainer works
[2026-01-26 21:01:50] Set ATHENA_PROC_NUMBER=4
[2026-01-26 21:01:50] Set ATHENA_CORE_NUMBER=4
[2026-01-26 21:01:50] Starting ATLAS job with PandaID=6983326764
[2026-01-26 21:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:05:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:05:24] 2026-01-26 21:04:53,595 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:05:24] 2026-01-26 21:04:53,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:05:24] 2026-01-26 21:04:53,597 | INFO     | did not find any defunct processes belonging to 1237073
[2026-01-26 22:05:24] 2026-01-26 21:04:53,598 | INFO     | did not find any defunct processes belonging to 1237073
[2026-01-26 22:05:24] 2026-01-26 21:04:53,598 | INFO     | ready for new job
[2026-01-26 22:05:24] 2026-01-26 21:04:53,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | **************************************
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | **************************************
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | 
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | architecture information:
[2026-01-26 22:05:24] 2026-01-26 21:04:53,599 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:05:24] 2026-01-26 21:04:53,609 | INFO     | cat /etc/os-release:
[2026-01-26 22:05:24] NAME="CentOS Linux"
[2026-01-26 22:05:24] VERSION="7 (Core)"
[2026-01-26 22:05:24] ID="centos"
[2026-01-26 22:05:24] ID_LIKE="rhel fedora"
[2026-01-26 22:05:24] VERSION_ID="7"
[2026-01-26 22:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:05:24] ANSI_COLOR="0;31"
[2026-01-26 22:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:05:24] HOME_URL="https://www.centos.org/"
[2026-01-26 22:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:05:24] 
[2026-01-26 22:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:05:24] 
[2026-01-26 22:05:24] 2026-01-26 21:04:53,609 | INFO     | **************************************
[2026-01-26 22:05:24] 2026-01-26 21:04:54,112 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 22:05:24] 2026-01-26 21:04:54,125 | INFO     | sufficient remaining disk space (334398226432 B)
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | INFO     | update_server=False
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | INFO     | aborting loop
[2026-01-26 22:05:24] 2026-01-26 21:04:54,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:05:24] 2026-01-26 21:04:54,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:05:24] 2026-01-26 21:04:54,417 | INFO     | all data control threads have been joined
[2026-01-26 22:05:24] 2026-01-26 21:04:54,552 | INFO     | all job control threads have been joined
[2026-01-26 22:05:24] 2026-01-26 21:04:55,131 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,132 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,142 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,144 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,262 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,423 | INFO     | [data] control thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,558 | INFO     | [job] control thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:55,614 | INFO     | all payload control threads have been joined
[2026-01-26 22:05:24] 2026-01-26 21:04:55,668 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:56,296 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:56,338 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:56,503 | INFO     | [job] validate thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:56,620 | INFO     | [payload] control thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:56,626 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:57,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:05:24] 2026-01-26 21:04:58,053 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:04:58,133 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:05:04,315 | INFO     | job.realtimelogging is not enabled
[2026-01-26 22:05:24] 2026-01-26 21:05:04,552 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:05:24] 2026-01-26 21:05:05,321 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:05:24] 2026-01-26 21:05:06,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055711397696)>', '<ExcThread(monitor, started 140055343503104)>']
[2026-01-26 22:05:24] 2026-01-26 21:05:11,289 | INFO     | all workflow threads have been joined
[2026-01-26 22:05:24] 2026-01-26 21:05:11,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:05:24] 2026-01-26 21:05:11,289 | INFO     | traces error code: 0
[2026-01-26 22:05:24] 2026-01-26 21:05:11,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | INFO     | PID=1232566 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:05:24] 2026-01-26 21:05:24,186 | INFO     | [monitor] control thread has ended
[2026-01-26 22:05:24] 2026-01-26 21:05:24,236 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:05:24] 2026-01-26 21:05:24,239 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:05:24] 2026-01-26 21:05:24,242 [wrapper] pilotpid: 1232566
[2026-01-26 22:05:24] 2026-01-26 21:05:24,244 [wrapper] Pilot exit status: 0
[2026-01-26 22:05:24] 2026-01-26 21:05:24,252 [wrapper] pandaids: 6983326764
[2026-01-26 22:05:24] 2026-01-26 21:05:24,270 [wrapper] cleanup supervisor_pilot 1242201 1232567
[2026-01-26 22:05:24] 2026-01-26 21:05:24,272 [wrapper] Test setup, not cleaning
[2026-01-26 22:05:24] 2026-01-26 21:05:24,275 [wrapper] apfmon messages muted
[2026-01-26 22:05:24] 2026-01-26 21:05:24,277 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:05:24] 2026-01-26 21:05:24,280 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:05:24]  *** Error codes and diagnostics ***
[2026-01-26 22:05:24]     "exeErrorCode": 0,
[2026-01-26 22:05:24]     "exeErrorDiag": "",
[2026-01-26 22:05:24]     "pilotErrorCode": 0,
[2026-01-26 22:05:24]     "pilotErrorDiag": "",
[2026-01-26 22:05:24]  *** Listing of results directory ***
[2026-01-26 22:05:24] total 668528
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:48 queuedata.json
[2026-01-26 22:05:24] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc       100 Jan 26 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:05:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 21:01 run_atlas
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc       105 Jan 26 21:01 job.xml
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc 498549734 Jan 26 21:01 EVNT.48318032._000012.pool.root.1
[2026-01-26 22:05:24] drwxrwx--x 2 boinc boinc      4096 Jan 26 21:01 shared
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc    597766 Jan 26 21:01 input.tar.gz
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc     15845 Jan 26 21:01 start_atlas.sh
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc         0 Jan 26 21:01 boinc_setup_complete
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc      6438 Jan 26 21:01 init_data.xml
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc         0 Jan 26 21:01 boinc_lockfile
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc      2530 Jan 26 21:01 pandaJob.out
[2026-01-26 22:05:24] -rw------- 1 boinc boinc   1006449 Jan 26 21:01 agis_schedconf.cvmfs.json
[2026-01-26 22:05:24] -rw------- 1 boinc boinc   1516246 Jan 26 21:01 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:05:24] -rw------- 1 boinc boinc       418 Jan 26 21:02 workernode_map.json
[2026-01-26 22:05:24] drwx------ 5 boinc boinc      4096 Jan 26 21:02 pilot3
[2026-01-26 22:05:24] -rw------- 1 boinc boinc 180446912 Jan 26 22:04 HITS.48318034._000569.pool.root.1
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc       530 Jan 26 22:04 boinc_task_state.xml
[2026-01-26 22:05:24] -rw------- 1 boinc boinc      1027 Jan 26 22:04 memory_monitor_summary.json
[2026-01-26 22:05:24] -rw------- 1 boinc boinc    258576 Jan 26 22:04 log.48318034._000569.job.log.tgz.1
[2026-01-26 22:05:24] -rw------- 1 boinc boinc      6290 Jan 26 22:04 heartbeat.json
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc        27 Jan 26 22:05 wrapper_checkpoint.txt
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc      8192 Jan 26 22:05 boinc_mmap_file
[2026-01-26 22:05:24] -rw------- 1 boinc boinc       747 Jan 26 22:05 pilotlog.txt
[2026-01-26 22:05:24] -rw------- 1 boinc boinc        95 Jan 26 22:05 pilot_heartbeat.json
[2026-01-26 22:05:24] -rw------- 1 boinc boinc    565555 Jan 26 22:05 log.48318034._000569.job.log.1
[2026-01-26 22:05:24] -rw------- 1 boinc boinc       357 Jan 26 22:05 output.list
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc       620 Jan 26 22:05 runtime_log
[2026-01-26 22:05:24] -rw------- 1 boinc boinc    839680 Jan 26 22:05 result.tar.gz
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc      8916 Jan 26 22:05 runtime_log.err
[2026-01-26 22:05:24] -rw------- 1 boinc boinc       661 Jan 26 22:05 0YbMDmkLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPS1KDmUeNXWo.diag
[2026-01-26 22:05:24] -rw-r--r-- 1 boinc boinc     10065 Jan 26 22:05 stderr.txt
[2026-01-26 22:05:24] HITS file was successfully produced:
[2026-01-26 22:05:24] -rw------- 1 boinc boinc 180446912 Jan 26 22:04 shared/HITS.pool.root.1
[2026-01-26 22:05:24]  *** Contents of shared directory: ***
[2026-01-26 22:05:24] total 664516
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc 498549734 Jan 26 21:01 ATLAS.root_0
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc    597766 Jan 26 21:01 input.tar.gz
[2026-01-26 22:05:24] -rw-r--r-- 2 boinc boinc     15845 Jan 26 21:01 start_atlas.sh
[2026-01-26 22:05:24] -rw------- 1 boinc boinc 180446912 Jan 26 22:04 HITS.pool.root.1
[2026-01-26 22:05:24] -rw------- 1 boinc boinc    839680 Jan 26 22:05 result.tar.gz
22:05:26 (1228468): run_atlas exited; CPU time 14146.930843
22:05:26 (1228468): called boinc_finish(0)

</stderr_txt>
]]>

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