Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:55 (162938): wrapper (7.7.26015): starting
15:33:55 (162938): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 15:33:55] Arguments: --nthreads 8
[2026-01-26 15:33:55] Threads: 8
[2026-01-26 15:33:55] Checking for CVMFS
[2026-01-26 15:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:33:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:33:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:33:55] 2.13.2.0 2419908 8395 59344 155549 3 49 2682078 4097024 0 130560 0 5081448 99.990 264544 18171 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-26 15:33:55] CVMFS is ok
[2026-01-26 15:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 15:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 15:33:55] Further information can be found at the LHC@home message board.
[2026-01-26 15:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:33:55] Checking for apptainer binary...
[2026-01-26 15:33:55] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-26 15:33:55] apptainer is not installed, using version from CVMFS
[2026-01-26 15:33:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:33:56] pckeatlas02
[2026-01-26 15:33:56] apptainer works
[2026-01-26 15:33:56] Set ATHENA_PROC_NUMBER=8
[2026-01-26 15:33:56] Set ATHENA_CORE_NUMBER=8
[2026-01-26 15:33:56] Starting ATLAS job with PandaID=6982691838
[2026-01-26 15:33:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:13:18]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:13:18]  lfn=log.48299677._000593.job.log.tgz.1
[2026-01-26 17:13:18]  mtime=0
[2026-01-26 17:13:18]  protocol_id=None
[2026-01-26 17:13:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:13:18]  replicas=None
[2026-01-26 17:13:18]  scope=mc23_13p6TeV
[2026-01-26 17:13:18]  status=None
[2026-01-26 17:13:18]  status_code=0
[2026-01-26 17:13:18]  storage_token=
[2026-01-26 17:13:18]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6982691838/log.48299677._000593.job.log.tgz.1
[2026-01-26 17:13:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/78/log.48299677._000593.job.log.tgz.1
[2026-01-26 17:13:18]  workdir=None
[2026-01-26 17:13:18] ]
[2026-01-26 17:13:18] 2026-01-26 16:12:13,972 | INFO     | transferring file log.48299677._000593.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6982691838/log.48299677._000593.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-26 17:13:18] 2026-01-26 16:12:13,973 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6982691838/log.48299677._000593.job.log.tgz.1 /var/lib/boinc/slots/19/log.48299677._000593.j
[2026-01-26 17:13:18] 2026-01-26 16:12:13,980 | INFO     | adding to output.list: log.48299677._000593.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/78/log.48299677._000593.job.log.tg
[2026-01-26 17:13:18] 2026-01-26 16:12:13,981 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:13:18] 2026-01-26 16:12:13,981 | INFO     | summary of transferred files:
[2026-01-26 17:13:18] 2026-01-26 16:12:13,981 | INFO     |  -- lfn=log.48299677._000593.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:13:18] 2026-01-26 16:12:13,981 | INFO     | stage-out finished correctly
[2026-01-26 17:13:18] 2026-01-26 16:12:14,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:13:18] 2026-01-26 16:12:14,078 | WARNING  | process 172237 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:13:18] 2026-01-26 16:12:14,078 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6982691838/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:13:18] 2026-01-26 16:12:14,105 | INFO     | number of running child processes to parent process 172237: 1
[2026-01-26 17:13:18] 2026-01-26 16:12:14,105 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:13:18] 2026-01-26 16:12:14,263 | INFO     | time since job start (5892s) is within the limit (349056.0s)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,268 | INFO     | time since job start (5894s) is within the limit (349056.0s)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,608 | INFO     | monitor loop #452: job 0:6982691838 is in state 'finished'
[2026-01-26 17:13:18] 2026-01-26 16:12:16,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,669 | INFO     | job 6982691838 has state=finished
[2026-01-26 17:13:18] 2026-01-26 16:12:16,669 | INFO     | preparing for final server update for job 6982691838 in state='finished'
[2026-01-26 17:13:18] 2026-01-26 16:12:16,669 | INFO     | reading metadata from: /var/lib/boinc/slots/19/PanDA_Pilot-6982691838/jobReport.json
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/19/workernode_map.json
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | job 6982691838 has finished - writing final server update
[2026-01-26 17:13:18] 2026-01-26 16:12:16,670 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6982691838/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | INFO     | extracted standard info from prmon json
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:13:18] 2026-01-26 16:12:16,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:13:18] 2026-01-26 16:12:16,672 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:13:18] 2026-01-26 16:12:16,672 | INFO     | sum of square deviations: 226022842.5
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | sum of deviations: -18486034231.499996
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | mean x: 1769441078.5
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | mean y: 2700492.7666666666
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | intersect: 144722357966.20663
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | chi2: 0.16539007127875724
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | current memory leak: -81.79 B/s (using 90 data points, chi2=0.17)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | could have reported an average CPU frequency of 3840 MHz (7 samples)
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | ..............................
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . Timing measurements:
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . get job = 0 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . initial setup = 2 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . payload setup = 3 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . stage-in = 0 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . payload execution = 5872 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . stage-out = 0 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | . log creation = 0 s
[2026-01-26 17:13:18] 2026-01-26 16:12:16,673 | INFO     | ..............................
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | 
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | job summary report
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | --------------------------------------------------
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | PanDA job id: 6982691838
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | task id: 48299677
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | errors: (none)
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | pilot state: finished 
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | transexitcode: 0
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | exeerrorcode: 0
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | exeerrordiag: 
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | exitcode: 0
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | exitmsg: OK
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | cpuconsumptiontime: 44907 s
[2026-01-26 17:13:18] 2026-01-26 16:12:17,055 | INFO     | nevents: 400
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | neventsw: 0
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | pid: 172237
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | pgrp: 172237
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | corecount: 8
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | event service: False
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | sizes: {0: 2284115, 1: 2284321, 11: 2284349, 5878: 2311181, 5879: 2311180, 5880: 2320420, 5883: 2320558}
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | --------------------------------------------------
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | 
[2026-01-26 17:13:18] 2026-01-26 16:12:17,056 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-01-26 17:13:18] 2026-01-26 16:12:17,063 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | job 6982691838 has completed (purged errors)
[2026-01-26 17:13:18] 2026-01-26 16:12:17,064 | INFO     | overall cleanup function is called
[2026-01-26 17:13:18] 2026-01-26 16:12:18,070 | INFO     | --- collectZombieJob: --- 10, [172237]
[2026-01-26 17:13:18] 2026-01-26 16:12:18,071 | INFO     | zombie collector waiting for pid 172237
[2026-01-26 17:13:18] 2026-01-26 16:12:18,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:13:18] 2026-01-26 16:12:18,071 | INFO     | collected zombie processes
[2026-01-26 17:13:18] 2026-01-26 16:12:18,071 | INFO     | will attempt to kill all subprocesses of pid=172237
[2026-01-26 17:13:18] 2026-01-26 16:12:18,099 | INFO     | process IDs to be killed: [172237] (in reverse order)
[2026-01-26 17:13:18] 2026-01-26 16:12:18,115 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:13:18] 2026-01-26 16:12:18,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:13:18] 2026-01-26 16:12:18,116 | INFO     | did not find any defunct processes belonging to 172237
[2026-01-26 17:13:18] 2026-01-26 16:12:18,116 | INFO     | did not find any defunct processes belonging to 172237
[2026-01-26 17:13:18] 2026-01-26 16:12:18,117 | INFO     | ready for new job
[2026-01-26 17:13:18] 2026-01-26 16:12:18,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:13:18] 2026-01-26 16:12:18,117 | INFO     | **************************************
[2026-01-26 17:13:18] 2026-01-26 16:12:18,117 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:13:18] 2026-01-26 16:12:18,117 | INFO     | **************************************
[2026-01-26 17:13:18] 2026-01-26 16:12:18,118 | INFO     | 
[2026-01-26 17:13:18] 2026-01-26 16:12:18,118 | INFO     | architecture information:
[2026-01-26 17:13:18] 2026-01-26 16:12:18,118 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:13:18] 2026-01-26 16:12:18,124 | INFO     | cat /etc/os-release:
[2026-01-26 17:13:18] NAME="CentOS Linux"
[2026-01-26 17:13:18] VERSION="7 (Core)"
[2026-01-26 17:13:18] ID="centos"
[2026-01-26 17:13:18] ID_LIKE="rhel fedora"
[2026-01-26 17:13:18] VERSION_ID="7"
[2026-01-26 17:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:13:18] ANSI_COLOR="0;31"
[2026-01-26 17:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:13:18] HOME_URL="https://www.centos.org/"
[2026-01-26 17:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:13:18] 
[2026-01-26 17:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:13:18] 
[2026-01-26 17:13:18] 2026-01-26 16:12:18,124 | INFO     | **************************************
[2026-01-26 17:13:18] 2026-01-26 16:12:18,627 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | INFO     | sufficient remaining disk space (114920783872 B)
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | INFO     | update_server=False
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:13:18] 2026-01-26 16:12:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:13:18] 2026-01-26 16:12:18,682 | INFO     | all payload control threads have been joined
[2026-01-26 17:13:18] 2026-01-26 16:12:19,112 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 17:13:18] 2026-01-26 16:12:19,112 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 17:13:18] 2026-01-26 16:12:19,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:13:18] 2026-01-26 16:12:19,112 | INFO     | will abort loop
[2026-01-26 17:13:18] 2026-01-26 16:12:19,450 | INFO     | all job control threads have been joined
[2026-01-26 17:13:18] 2026-01-26 16:12:19,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:13:18] 2026-01-26 16:12:19,639 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,639 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,647 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,671 | INFO     | all data control threads have been joined
[2026-01-26 17:13:18] 2026-01-26 16:12:19,687 | INFO     | [payload] control thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,693 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,853 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:19,898 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:20,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:13:18] 2026-01-26 16:12:20,117 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:20,456 | INFO     | [job] control thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:20,545 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:20,676 | INFO     | [data] control thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:20,965 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:21,018 | INFO     | [job] validate thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:21,530 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:24,061 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:29,097 | INFO     | job.realtimelogging is not enabled
[2026-01-26 17:13:18] 2026-01-26 16:12:30,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:13:18] 2026-01-26 16:12:49,395 | INFO     | PID=167026 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 17:13:18] 2026-01-26 16:12:49,395 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:13:18] 2026-01-26 16:12:49,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:13:18] 2026-01-26 16:12:49,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:13:18] 2026-01-26 16:13:12,082 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:13:18] 2026-01-26 16:13:13,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169287780160)>', '<ExcThread(monitor, started 140168606512896)>']
[2026-01-26 17:13:18] 2026-01-26 16:13:13,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:13:18] 2026-01-26 16:13:13,518 | INFO     | [monitor] control thread has ended
[2026-01-26 17:13:18] 2026-01-26 16:13:18,234 | INFO     | all workflow threads have been joined
[2026-01-26 17:13:18] 2026-01-26 16:13:18,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:13:18] 2026-01-26 16:13:18,234 | INFO     | traces error code: 0
[2026-01-26 17:13:18] 2026-01-26 16:13:18,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:13:18] 2026-01-26 16:13:18,294 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:13:18] 2026-01-26 16:13:18,295 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:13:18] 2026-01-26 16:13:18,296 [wrapper] pilotpid: 167026
[2026-01-26 17:13:18] 2026-01-26 16:13:18,297 [wrapper] Pilot exit status: 0
[2026-01-26 17:13:18] 2026-01-26 16:13:18,301 [wrapper] pandaids: 6982691838
[2026-01-26 17:13:18] 2026-01-26 16:13:18,311 [wrapper] cleanup supervisor_pilot  182472 167027
[2026-01-26 17:13:18] 2026-01-26 16:13:18,312 [wrapper] Test setup, not cleaning
[2026-01-26 17:13:18] 2026-01-26 16:13:18,313 [wrapper] apfmon messages muted
[2026-01-26 17:13:18] 2026-01-26 16:13:18,314 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:13:18] 2026-01-26 16:13:18,315 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:13:18]  *** Error codes and diagnostics ***
[2026-01-26 17:13:18]     "exeErrorCode": 0,
[2026-01-26 17:13:18]     "exeErrorDiag": "",
[2026-01-26 17:13:18]     "pilotErrorCode": 0,
[2026-01-26 17:13:18]     "pilotErrorDiag": "",
[2026-01-26 17:13:18]  *** Listing of results directory ***
[2026-01-26 17:13:18] total 417448
[2026-01-26 17:13:18] -rwx------. 1 boinc boinc     36322 Jan 25 07:27 runpilot2-wrapper.sh
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc      5111 Jan 25 07:27 queuedata.json
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc    584422 Jan 25 07:27 pilot3.tar.gz
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc       100 Jan 26 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:13:18] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 15:33 run_atlas
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc       105 Jan 26 15:33 job.xml
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc      6275 Jan 26 15:33 init_data.xml
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc 252726179 Jan 26 15:33 EVNT.48299675._000017.pool.root.1
[2026-01-26 17:13:18] drwxrwx--x. 2 boinc boinc        68 Jan 26 15:33 shared
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc    597778 Jan 26 15:33 input.tar.gz
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc     15845 Jan 26 15:33 start_atlas.sh
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc         0 Jan 26 15:33 boinc_lockfile
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc      2620 Jan 26 15:33 pandaJob.out
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc   1002189 Jan 26 15:34 agis_schedconf.cvmfs.json
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc   1516246 Jan 26 15:34 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc       419 Jan 26 15:34 workernode_map.json
[2026-01-26 17:13:18] drwx------. 5 boinc boinc      4096 Jan 26 15:34 pilot3
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc 168451080 Jan 26 17:11 HITS.48299677._000593.pool.root.1
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc       529 Jan 26 17:12 boinc_task_state.xml
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc      1014 Jan 26 17:12 memory_monitor_summary.json
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc    327897 Jan 26 17:12 log.48299677._000593.job.log.tgz.1
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc      6312 Jan 26 17:12 heartbeat.json
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc        95 Jan 26 17:12 pilot_heartbeat.json
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc      8192 Jan 26 17:13 boinc_mmap_file
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc        27 Jan 26 17:13 wrapper_checkpoint.txt
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc      5003 Jan 26 17:13 pilotlog.txt
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc    853702 Jan 26 17:13 log.48299677._000593.job.log.1
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc       357 Jan 26 17:13 output.list
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc       620 Jan 26 17:13 runtime_log
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc   1198080 Jan 26 17:13 result.tar.gz
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc       650 Jan 26 17:13 w9zLDm6l838nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzv6KDmwQAJVo.diag
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc      8845 Jan 26 17:13 runtime_log.err
[2026-01-26 17:13:18] -rw-r--r--. 1 boinc boinc     21764 Jan 26 17:13 stderr.txt
[2026-01-26 17:13:18] HITS file was successfully produced:
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc 168451080 Jan 26 17:11 shared/HITS.pool.root.1
[2026-01-26 17:13:18]  *** Contents of shared directory: ***
[2026-01-26 17:13:18] total 413084
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc 252726179 Jan 26 15:33 ATLAS.root_0
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc    597778 Jan 26 15:33 input.tar.gz
[2026-01-26 17:13:18] -rw-r--r--. 2 boinc boinc     15845 Jan 26 15:33 start_atlas.sh
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc 168451080 Jan 26 17:11 HITS.pool.root.1
[2026-01-26 17:13:18] -rw-------. 1 boinc boinc   1198080 Jan 26 17:13 result.tar.gz
17:13:19 (162938): run_atlas exited; CPU time 44951.369369
17:13:19 (162938): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN