Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:34:37 (98131): wrapper (7.7.26015): starting
18:34:37 (98131): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:34:37] Arguments: --nthreads 12
[2026-01-26 18:34:37] Threads: 12
[2026-01-26 18:34:37] Checking for CVMFS
[2026-01-26 18:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:34:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:34:38] 2.13.3.0 2569 734 47844 155556 3 50 2237936 4096001 912 130560 0 289832 99.966 33328 733 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 18:34:38] CVMFS is ok
[2026-01-26 18:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:34:38] Checking for apptainer binary...
[2026-01-26 18:34:38] apptainer is not installed, using version from CVMFS
[2026-01-26 18:34:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:34:38] gggg3250
[2026-01-26 18:34:38] apptainer works
[2026-01-26 18:34:38] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:34:38] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:34:38] Starting ATLAS job with PandaID=6983345421
[2026-01-26 18:34:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:10:35]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:10:35] 2026-01-26 22:09:45,786 | INFO     | time since job start (12877s) is within the limit (349056.0s)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,354 | INFO     | job 6983345421 has state=finished
[2026-01-26 22:10:35] 2026-01-26 22:09:46,354 | INFO     | preparing for final server update for job 6983345421 in state='finished'
[2026-01-26 22:10:35] 2026-01-26 22:09:46,354 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983345421/jobReport.json
[2026-01-26 22:10:35] 2026-01-26 22:09:46,355 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-01-26 22:10:35] 2026-01-26 22:09:46,355 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,355 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,356 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:10:35] 2026-01-26 22:09:46,356 | INFO     | job 6983345421 has finished - writing final server update
[2026-01-26 22:10:35] 2026-01-26 22:09:46,356 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,356 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983345421/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,357 | INFO     | extracted standard info from prmon json
[2026-01-26 22:10:35] 2026-01-26 22:09:46,357 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:10:35] 2026-01-26 22:09:46,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:10:35] 2026-01-26 22:09:46,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:10:35] 2026-01-26 22:09:46,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:10:35] 2026-01-26 22:09:46,358 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:10:35] 2026-01-26 22:09:46,359 | INFO     | sum of square deviations: 2912836010.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,359 | INFO     | sum of deviations: 16589257256.999994
[2026-01-26 22:10:35] 2026-01-26 22:09:46,359 | INFO     | mean x: 1769458935.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,359 | INFO     | mean y: 2675319.218009479
[2026-01-26 22:10:35] 2026-01-26 22:09:46,359 | INFO     | intersect: -10074791924.951439
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | chi2: 1.9447833410519715
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | sum of square deviations: 2710627567.5
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | sum of deviations: 16078462624.500008
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | mean x: 1769458782.5
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | mean y: 2674935.4126213593
[2026-01-26 22:10:35] 2026-01-26 22:09:46,360 | INFO     | intersect: -10493114763.302431
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | chi2: 1.9457840154599964
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | current chi2=1.9457840154599964 (change=-0.05145428731837997 %)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | right removable region: 205
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | sum of square deviations: 2710627567.5
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | sum of deviations: -23106959149.000004
[2026-01-26 22:10:35] 2026-01-26 22:09:46,361 | INFO     | mean x: 1769459087.5
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | mean y: 2705005.990291262
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | intersect: 15086598987.190763
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | chi2: 0.30395901157338434
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | current chi2=0.30395901157338434 (change=84.37054631448217 %)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | sum of square deviations: 2518000700.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,362 | INFO     | sum of deviations: -29922132787.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | mean x: 1769459240.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | mean y: 2710374.84079602
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | intersect: 21029707841.70572
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | chi2: 0.24275698345776905
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | current chi2=0.24275698345776905 (change=20.134960894501848 %)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | left removable region: 20
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | sum of square deviations: 1963274020.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,363 | INFO     | sum of deviations: -17909827957.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | mean x: 1769459362.0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | mean y: 2700480.0432432434
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | intersect: 16144467970.208973
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | chi2: 0.1747584846990586
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | current memory leak: -9.12 B/s (using 185 data points, chi2=0.17)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | could have reported an average CPU frequency of 3292 MHz (11 samples)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | ..............................
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . Timing measurements:
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . get job = 0 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . initial setup = 13 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . payload setup = 11 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . stage-in = 0 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . payload execution = 12854 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . stage-out = 3 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | . log creation = 0 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,364 | INFO     | ..............................
[2026-01-26 22:10:35] 2026-01-26 22:09:46,402 | INFO     | 
[2026-01-26 22:10:35] 2026-01-26 22:09:46,402 | INFO     | job summary report
[2026-01-26 22:10:35] 2026-01-26 22:09:46,402 | INFO     | --------------------------------------------------
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | PanDA job id: 6983345421
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | task id: 48317872
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | errors: (none)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | pilot state: finished 
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | transexitcode: 0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | exeerrorcode: 0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | exeerrordiag: 
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | exitcode: 0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | exitmsg: OK
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | cpuconsumptiontime: 24507 s
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | nevents: 400
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | neventsw: 0
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | pid: 106516
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | pgrp: 106516
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | corecount: 12
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | event service: False
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | sizes: {0: 2283822, 1: 2284283, 12870: 2314221, 12874: 2323265, 12875: 2323321, 12876: 2323515}
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | --------------------------------------------------
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | 
[2026-01-26 22:10:35] 2026-01-26 22:09:46,403 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,415 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,415 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:10:35] 2026-01-26 22:09:46,415 | INFO     | job 6983345421 has completed (purged errors)
[2026-01-26 22:10:35] 2026-01-26 22:09:46,415 | INFO     | overall cleanup function is called
[2026-01-26 22:10:35] 2026-01-26 22:09:47,422 | INFO     | --- collectZombieJob: --- 10, [106516]
[2026-01-26 22:10:35] 2026-01-26 22:09:47,422 | INFO     | zombie collector waiting for pid 106516
[2026-01-26 22:10:35] 2026-01-26 22:09:47,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:10:35] 2026-01-26 22:09:47,422 | INFO     | collected zombie processes
[2026-01-26 22:10:35] 2026-01-26 22:09:47,422 | INFO     | will attempt to kill all subprocesses of pid=106516
[2026-01-26 22:10:35] 2026-01-26 22:09:47,456 | INFO     | process IDs to be killed: [106516] (in reverse order)
[2026-01-26 22:10:35] 2026-01-26 22:09:47,473 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:10:35] 2026-01-26 22:09:47,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:10:35] 2026-01-26 22:09:47,474 | INFO     | did not find any defunct processes belonging to 106516
[2026-01-26 22:10:35] 2026-01-26 22:09:47,475 | INFO     | did not find any defunct processes belonging to 106516
[2026-01-26 22:10:35] 2026-01-26 22:09:47,475 | INFO     | ready for new job
[2026-01-26 22:10:35] 2026-01-26 22:09:47,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | **************************************
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | **************************************
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | 
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | architecture information:
[2026-01-26 22:10:35] 2026-01-26 22:09:47,476 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:10:35] 2026-01-26 22:09:47,482 | INFO     | cat /etc/os-release:
[2026-01-26 22:10:35] NAME="CentOS Linux"
[2026-01-26 22:10:35] VERSION="7 (Core)"
[2026-01-26 22:10:35] ID="centos"
[2026-01-26 22:10:35] ID_LIKE="rhel fedora"
[2026-01-26 22:10:35] VERSION_ID="7"
[2026-01-26 22:10:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:10:35] ANSI_COLOR="0;31"
[2026-01-26 22:10:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:10:35] HOME_URL="https://www.centos.org/"
[2026-01-26 22:10:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:10:35] 
[2026-01-26 22:10:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:10:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:10:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:10:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:10:35] 
[2026-01-26 22:10:35] 2026-01-26 22:09:47,482 | INFO     | **************************************
[2026-01-26 22:10:35] 2026-01-26 22:09:47,983 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | INFO     | sufficient remaining disk space (87688216576 B)
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | INFO     | update_server=False
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:10:35] 2026-01-26 22:09:47,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:10:35] 2026-01-26 22:09:48,039 | INFO     | all payload control threads have been joined
[2026-01-26 22:10:35] 2026-01-26 22:09:48,547 | INFO     | all job control threads have been joined
[2026-01-26 22:10:35] 2026-01-26 22:09:48,626 | INFO     | all data control threads have been joined
[2026-01-26 22:10:35] 2026-01-26 22:09:48,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:10:35] 2026-01-26 22:09:48,990 | INFO     | aborting loop
[2026-01-26 22:10:35] 2026-01-26 22:09:48,996 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:48,996 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,043 | INFO     | [payload] control thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,199 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,354 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,413 | INFO     | [job] validate thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,487 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,551 | INFO     | [job] control thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,632 | INFO     | [data] control thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,793 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,878 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,991 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:49,997 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:50,167 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:51,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:10:35] 2026-01-26 22:09:55,419 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:09:58,989 | INFO     | job.realtimelogging is not enabled
[2026-01-26 22:10:35] 2026-01-26 22:09:59,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:10:35] 2026-01-26 22:10:18,887 | INFO     | PID=102136 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 22:10:35] 2026-01-26 22:10:18,887 | INFO     | .. there are 2 such processes running
[2026-01-26 22:10:35] 2026-01-26 22:10:18,887 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:10:35] 2026-01-26 22:10:18,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:10:35] 2026-01-26 22:10:18,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:10:35] 2026-01-26 22:10:29,824 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:10:35] 2026-01-26 22:10:29,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133594316199744)>', '<ExcThread(monitor, started 133593540060928)>']
[2026-01-26 22:10:35] 2026-01-26 22:10:29,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:10:35] 2026-01-26 22:10:29,938 | INFO     | [monitor] control thread has ended
[2026-01-26 22:10:35] 2026-01-26 22:10:34,922 | INFO     | all workflow threads have been joined
[2026-01-26 22:10:35] 2026-01-26 22:10:34,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:10:35] 2026-01-26 22:10:34,922 | INFO     | traces error code: 0
[2026-01-26 22:10:35] 2026-01-26 22:10:34,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:10:35] 2026-01-26 22:10:34,984 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:10:35] 2026-01-26 22:10:34,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:10:35] 2026-01-26 22:10:34,987 [wrapper] pilotpid: 102136
[2026-01-26 22:10:35] 2026-01-26 22:10:34,988 [wrapper] Pilot exit status: 0
[2026-01-26 22:10:35] 2026-01-26 22:10:34,992 [wrapper] pandaids: 6983345421
[2026-01-26 22:10:35] 2026-01-26 22:10:35,002 [wrapper] cleanup supervisor_pilot  112805 102137
[2026-01-26 22:10:35] 2026-01-26 22:10:35,004 [wrapper] Test setup, not cleaning
[2026-01-26 22:10:35] 2026-01-26 22:10:35,005 [wrapper] apfmon messages muted
[2026-01-26 22:10:35] 2026-01-26 22:10:35,006 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:10:35] 2026-01-26 22:10:35,008 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:10:35]  *** Error codes and diagnostics ***
[2026-01-26 22:10:35]     "exeErrorCode": 0,
[2026-01-26 22:10:35]     "exeErrorDiag": "",
[2026-01-26 22:10:35]     "pilotErrorCode": 0,
[2026-01-26 22:10:35]     "pilotErrorDiag": "",
[2026-01-26 22:10:35]  *** Listing of results directory ***
[2026-01-26 22:10:35] total 662676
[2026-01-26 22:10:35] -rw-r--r-- 1 boinc boinc      5111 Jan 25 20:48 queuedata.json
[2026-01-26 22:10:35] -rw-r--r-- 1 boinc boinc    584422 Jan 25 20:48 pilot3.tar.gz
[2026-01-26 22:10:35] -rwx------ 1 boinc boinc     36322 Jan 25 20:49 runpilot2-wrapper.sh
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc       100 Jan 26 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:10:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 18:34 run_atlas
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc       105 Jan 26 18:34 job.xml
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc 489702950 Jan 26 18:34 EVNT.48317869._000029.pool.root.1
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:34 start_atlas.sh
[2026-01-26 22:10:35] drwxrwx--x 2 boinc boinc      4096 Jan 26 18:34 shared
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc    597753 Jan 26 18:34 input.tar.gz
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:34 boinc_setup_complete
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc      9383 Jan 26 18:34 init_data.xml
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:34 boinc_lockfile
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc      2514 Jan 26 18:34 pandaJob.out
[2026-01-26 22:10:35] -rw------- 1 boinc boinc   1006384 Jan 26 18:34 agis_schedconf.cvmfs.json
[2026-01-26 22:10:35] -rw------- 1 boinc boinc       427 Jan 26 18:35 workernode_map.json
[2026-01-26 22:10:35] drwx------ 5 boinc boinc      4096 Jan 26 18:35 pilot3
[2026-01-26 22:10:35] -rw------- 1 boinc boinc 180134850 Jan 26 22:09 HITS.48317872._001444.pool.root.1
[2026-01-26 22:10:35] -rw------- 1 boinc boinc        95 Jan 26 22:09 pilot_heartbeat.json
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc       531 Jan 26 22:09 boinc_task_state.xml
[2026-01-26 22:10:35] -rw------- 1 boinc boinc      1020 Jan 26 22:09 memory_monitor_summary.json
[2026-01-26 22:10:35] -rw------- 1 boinc boinc   1516246 Jan 26 22:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:10:35] -rw------- 1 boinc boinc    529965 Jan 26 22:09 log.48317872._001444.job.log.tgz.1
[2026-01-26 22:10:35] -rw------- 1 boinc boinc      6316 Jan 26 22:09 heartbeat.json
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc        28 Jan 26 22:10 wrapper_checkpoint.txt
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 22:10 boinc_mmap_file
[2026-01-26 22:10:35] -rw------- 1 boinc boinc      4913 Jan 26 22:10 pilotlog.txt
[2026-01-26 22:10:35] -rw------- 1 boinc boinc   1865395 Jan 26 22:10 log.48317872._001444.job.log.1
[2026-01-26 22:10:35] -rw------- 1 boinc boinc       357 Jan 26 22:10 output.list
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc       620 Jan 26 22:10 runtime_log
[2026-01-26 22:10:35] -rw------- 1 boinc boinc   2416640 Jan 26 22:10 result.tar.gz
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc      9167 Jan 26 22:10 runtime_log.err
[2026-01-26 22:10:35] -rw------- 1 boinc boinc       653 Jan 26 22:10 8sZNDmqDM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwl1KDmW386nm.diag
[2026-01-26 22:10:35] -rw-rw-r-- 1 boinc boinc     21056 Jan 26 22:10 stderr.txt
[2026-01-26 22:10:35] HITS file was successfully produced:
[2026-01-26 22:10:35] -rw------- 1 boinc boinc 180134850 Jan 26 22:09 shared/HITS.pool.root.1
[2026-01-26 22:10:35]  *** Contents of shared directory: ***
[2026-01-26 22:10:35] total 657112
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc 489702950 Jan 26 18:34 ATLAS.root_0
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:34 start_atlas.sh
[2026-01-26 22:10:35] -rw-r--r-- 2 boinc boinc    597753 Jan 26 18:34 input.tar.gz
[2026-01-26 22:10:35] -rw------- 1 boinc boinc 180134850 Jan 26 22:09 HITS.pool.root.1
[2026-01-26 22:10:35] -rw------- 1 boinc boinc   2416640 Jan 26 22:10 result.tar.gz
22:10:36 (98131): run_atlas exited; CPU time 24566.412368
22:10:36 (98131): called boinc_finish(0)

</stderr_txt>
]]>

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