Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:39:20 (1306531): wrapper (7.7.26015): starting
06:39:20 (1306531): wrapper: running run_atlas (--nthreads 6)
[2026-01-29 06:39:20] Arguments: --nthreads 6
[2026-01-29 06:39:20] Threads: 6
[2026-01-29 06:39:20] Checking for CVMFS
[2026-01-29 06:39:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 06:41:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 06:41:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 06:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 06:41:21] 2.13.3.0 739238 881 66204 155626 0 188 3680213 4096000 0 130560 2 415505 98.399 736274 365 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-29 06:41:21] CVMFS is ok
[2026-01-29 06:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 06:41:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 06:41:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-29 06:41:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-29 06:41:21] Further information can be found at the LHC@home message board.
[2026-01-29 06:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 06:41:21] Checking for apptainer binary...
[2026-01-29 06:41:21] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-01-29 06:41:21] apptainer is not installed, using version from CVMFS
[2026-01-29 06:41:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 06:41:21] cachyos
[2026-01-29 06:41:21] apptainer works
[2026-01-29 06:41:21] Set ATHENA_PROC_NUMBER=6
[2026-01-29 06:41:21] Set ATHENA_CORE_NUMBER=6
[2026-01-29 06:41:21] Starting ATLAS job with PandaID=6983602696
[2026-01-29 06:41:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc1/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 08:32:48]  *** The last 200 lines of the pilot log: ***
[2026-01-29 08:32:48] 2026-01-29 07:31:56,642 | INFO     | sum of deviations: 8288971702.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,642 | INFO     | mean x: 1769668605.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,642 | INFO     | mean y: 2843119.7155963304
[2026-01-29 08:32:48] 2026-01-29 07:31:56,642 | INFO     | intersect: -36528971127.83877
[2026-01-29 08:32:48] 2026-01-29 07:31:56,642 | INFO     | chi2: 1.7795397498009773
[2026-01-29 08:32:48] 2026-01-29 07:31:56,643 | INFO     | sum of square deviations: 348769330.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,643 | INFO     | sum of deviations: 15285474519.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,643 | INFO     | mean x: 1769668452.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,643 | INFO     | mean y: 2862518.0673076925
[2026-01-29 08:32:48] 2026-01-29 07:31:56,643 | INFO     | intersect: -77556199337.08994
[2026-01-29 08:32:48] 2026-01-29 07:31:56,644 | INFO     | chi2: 1.1229336533394454
[2026-01-29 08:32:48] 2026-01-29 07:31:56,644 | INFO     | current chi2=1.1229336533394454 (change=36.89752344868758 %)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,644 | INFO     | sum of square deviations: 300842850.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,644 | INFO     | sum of deviations: 14462724423.000002
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | mean x: 1769668300.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | mean y: 2859898.0808080807
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | intersect: -85072204850.90323
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | chi2: 1.1243106982384627
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | current chi2=1.1243106982384627 (change=-0.12262923058029461 %)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | right removable region: 98
[2026-01-29 08:32:48] 2026-01-29 07:31:56,645 | INFO     | sum of square deviations: 348769330.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | sum of deviations: -5654019941.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | mean x: 1769668757.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | mean y: 2882369.0673076925
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | intersect: 28691593170.428562
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | chi2: 0.6805550903344268
[2026-01-29 08:32:48] 2026-01-29 07:31:56,646 | INFO     | current chi2=0.6805550903344268 (change=61.75667947790772 %)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,647 | INFO     | sum of square deviations: 300842850.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,647 | INFO     | sum of deviations: -5971510149.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,647 | INFO     | mean x: 1769668910.0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,647 | INFO     | mean y: 2883365.767676768
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | intersect: 35129514616.71736
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | chi2: 0.6803989262295773
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | current chi2=0.6803989262295773 (change=0.022946578031293928 %)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | left removable region: 20
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | sum of square deviations: 147126479.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | sum of deviations: 308166662.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | mean x: 1769668879.5
[2026-01-29 08:32:48] 2026-01-29 07:31:56,648 | INFO     | mean y: 2909188.782051282
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | intersect: -3703785582.8115945
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | chi2: 1.281182850358206e-05
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | current memory leak: 2.09 B/s (using 78 data points, chi2=0.00)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | could have reported an average CPU frequency of 1942 MHz (7 samples)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | ..............................
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | . Timing measurements:
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | . get job = 0 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | . initial setup = 3 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,649 | INFO     | . payload setup = 3 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,650 | INFO     | . stage-in = 0 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,650 | INFO     | . payload execution = 6603 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,650 | INFO     | . stage-out = 0 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,650 | INFO     | . log creation = 0 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,650 | INFO     | ..............................
[2026-01-29 08:32:48] 2026-01-29 07:31:56,722 | INFO     | 
[2026-01-29 08:32:48] 2026-01-29 07:31:56,722 | INFO     | job summary report
[2026-01-29 08:32:48] 2026-01-29 07:31:56,722 | INFO     | --------------------------------------------------
[2026-01-29 08:32:48] 2026-01-29 07:31:56,722 | INFO     | PanDA job id: 6983602696
[2026-01-29 08:32:48] 2026-01-29 07:31:56,722 | INFO     | task id: 48330021
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | errors: (none)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | pilot state: finished 
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | transexitcode: 0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | exeerrorcode: 0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | exeerrordiag: 
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | exitcode: 0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | exitmsg: OK
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | cpuconsumptiontime: 38119 s
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | nevents: 400
[2026-01-29 08:32:48] 2026-01-29 07:31:56,723 | INFO     | neventsw: 0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | pid: 1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | pgrp: 1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | corecount: 6
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | event service: False
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | sizes: {0: 2284123, 1: 2284385, 11: 2284413, 6609: 2311624, 6610: 2320679, 6611: 2320817}
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | --------------------------------------------------
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | 
[2026-01-29 08:32:48] 2026-01-29 07:31:56,724 | INFO     | executing command: ls -lF /var/lib/boinc1/slots/0
[2026-01-29 08:32:48] 2026-01-29 07:31:56,742 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,742 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,742 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,742 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | job 6983602696 has completed (purged errors)
[2026-01-29 08:32:48] 2026-01-29 07:31:56,744 | INFO     | overall cleanup function is called
[2026-01-29 08:32:48] 2026-01-29 07:31:57,636 | WARNING  | process 1315090 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 08:32:48] 2026-01-29 07:31:57,701 | INFO     | using path: /var/lib/boinc1/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 08:32:48] 2026-01-29 07:31:57,702 | INFO     | using path: /var/lib/boinc1/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 08:32:48] 2026-01-29 07:31:57,702 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-29 08:32:48] 2026-01-29 07:31:57,702 | WARNING  | maxPSS not found in memory monitor output
[2026-01-29 08:32:48] 2026-01-29 07:31:57,703 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc1/slots/0/PanDA_Pilot-6983602696/payload.stdout) since it has not been created yet
[2026-01-29 08:32:48] 2026-01-29 07:31:57,703 | INFO     | executing command: df -mP /var/lib/boinc1/slots/0
[2026-01-29 08:32:48] 2026-01-29 07:31:57,714 | INFO     | sufficient remaining disk space (22696427520 B)
[2026-01-29 08:32:48] 2026-01-29 07:31:57,715 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-29 08:32:48] 2026-01-29 07:31:57,715 | INFO     | output file size check: skipping output file /var/lib/boinc1/slots/0/PanDA_Pilot-6983602696/HITS.48330021._000222.pool.root.1 since it does not exist
[2026-01-29 08:32:48] 2026-01-29 07:31:57,781 | INFO     | --- collectZombieJob: --- 10, [1315090]
[2026-01-29 08:32:48] 2026-01-29 07:31:57,781 | INFO     | zombie collector waiting for pid 1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:57,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 08:32:48] 2026-01-29 07:31:57,781 | INFO     | collected zombie processes
[2026-01-29 08:32:48] 2026-01-29 07:31:57,781 | INFO     | will attempt to kill all subprocesses of pid=1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:57,813 | INFO     | number of running child processes to parent process 1315090: 1
[2026-01-29 08:32:48] 2026-01-29 07:31:57,813 | INFO     | maximum number of monitored processes: 6
[2026-01-29 08:32:48] 2026-01-29 07:31:57,813 | INFO     | aborting job monitoring since job object (job id=6983602696) has expired
[2026-01-29 08:32:48] 2026-01-29 07:31:57,874 | INFO     | process IDs to be killed: [1315090] (in reverse order)
[2026-01-29 08:32:48] 2026-01-29 07:31:57,910 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 08:32:48] 2026-01-29 07:31:57,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 08:32:48] 2026-01-29 07:31:57,913 | INFO     | did not find any defunct processes belonging to 1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:57,915 | INFO     | did not find any defunct processes belonging to 1315090
[2026-01-29 08:32:48] 2026-01-29 07:31:57,916 | INFO     | ready for new job
[2026-01-29 08:32:48] 2026-01-29 07:31:57,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 08:32:48] 2026-01-29 07:31:57,917 | INFO     | **************************************
[2026-01-29 08:32:48] 2026-01-29 07:31:57,917 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 08:32:48] 2026-01-29 07:31:57,917 | INFO     | **************************************
[2026-01-29 08:32:48] 2026-01-29 07:31:57,917 | INFO     | 
[2026-01-29 08:32:48] 2026-01-29 07:31:57,918 | INFO     | architecture information:
[2026-01-29 08:32:48] 2026-01-29 07:31:57,918 | INFO     | executing command: cat /etc/os-release
[2026-01-29 08:32:48] 2026-01-29 07:31:57,927 | INFO     | cat /etc/os-release:
[2026-01-29 08:32:48] NAME="CentOS Linux"
[2026-01-29 08:32:48] VERSION="7 (Core)"
[2026-01-29 08:32:48] ID="centos"
[2026-01-29 08:32:48] ID_LIKE="rhel fedora"
[2026-01-29 08:32:48] VERSION_ID="7"
[2026-01-29 08:32:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 08:32:48] ANSI_COLOR="0;31"
[2026-01-29 08:32:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 08:32:48] HOME_URL="https://www.centos.org/"
[2026-01-29 08:32:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 08:32:48] 
[2026-01-29 08:32:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 08:32:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 08:32:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 08:32:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 08:32:48] 
[2026-01-29 08:32:48] 2026-01-29 07:31:57,928 | INFO     | **************************************
[2026-01-29 08:32:48] 2026-01-29 07:31:58,431 | INFO     | executing command: df -mP /var/lib/boinc1/slots/0
[2026-01-29 08:32:48] 2026-01-29 07:31:58,442 | INFO     | sufficient remaining disk space (22696427520 B)
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | INFO     | update_server=False
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-29 08:32:48] 2026-01-29 07:31:58,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 08:32:48] 2026-01-29 07:31:58,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 08:32:48] 2026-01-29 07:31:58,444 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 08:32:48] 2026-01-29 07:31:58,444 | INFO     | will abort loop
[2026-01-29 08:32:48] 2026-01-29 07:31:58,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 08:32:48] 2026-01-29 07:31:58,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 08:32:48] 2026-01-29 07:31:58,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 08:32:48] 2026-01-29 07:31:59,221 | INFO     | all job control threads have been joined
[2026-01-29 08:32:48] 2026-01-29 07:31:59,448 | INFO     | [job] queue monitor thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:31:59,448 | INFO     | [job] retrieve thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:31:59,450 | INFO     | [job] job monitor thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:31:59,535 | INFO     | all data control threads have been joined
[2026-01-29 08:32:48] 2026-01-29 07:31:59,887 | INFO     | [job] validate thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:31:59,899 | INFO     | all payload control threads have been joined
[2026-01-29 08:32:48] 2026-01-29 07:32:00,035 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,066 | INFO     | [payload] failed_post thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,160 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,227 | INFO     | [job] control thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,270 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,326 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,359 | INFO     | [data] copytool_in thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,454 | INFO     | [data] copytool_out thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,541 | INFO     | [data] control thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,651 | INFO     | [payload] validate_post thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:00,905 | INFO     | [payload] control thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:01,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 08:32:48] 2026-01-29 07:32:05,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 08:32:48] 2026-01-29 07:32:41,807 | INFO     | [monitor] cgroup control has ended
[2026-01-29 08:32:48] 2026-01-29 07:32:43,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408421447488)>', '<ExcThread(monitor, started 140408067692288)>']
[2026-01-29 08:32:48] 2026-01-29 07:32:43,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 08:32:48] 2026-01-29 07:32:43,682 | INFO     | [monitor] control thread has ended
[2026-01-29 08:32:48] 2026-01-29 07:32:48,439 | INFO     | all workflow threads have been joined
[2026-01-29 08:32:48] 2026-01-29 07:32:48,439 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 08:32:48] 2026-01-29 07:32:48,439 | INFO     | traces error code: 0
[2026-01-29 08:32:48] 2026-01-29 07:32:48,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 08:32:48] 2026-01-29 07:32:48,518 [wrapper] ==== pilot stdout END ====
[2026-01-29 08:32:48] 2026-01-29 07:32:48,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 08:32:48] 2026-01-29 07:32:48,523 [wrapper] pilotpid: 1310670
[2026-01-29 08:32:48] 2026-01-29 07:32:48,525 [wrapper] Pilot exit status: 0
[2026-01-29 08:32:48] 2026-01-29 07:32:48,533 [wrapper] pandaids: 6983602696
[2026-01-29 08:32:48] 2026-01-29 07:32:48,557 [wrapper] cleanup supervisor_pilot 1320323 1310671
[2026-01-29 08:32:48] 2026-01-29 07:32:48,559 [wrapper] Test setup, not cleaning
[2026-01-29 08:32:48] 2026-01-29 07:32:48,561 [wrapper] apfmon messages muted
[2026-01-29 08:32:48] 2026-01-29 07:32:48,563 [wrapper] ==== wrapper stdout END ====
[2026-01-29 08:32:48] 2026-01-29 07:32:48,566 [wrapper] ==== wrapper stderr END ====
[2026-01-29 08:32:48]  *** Error codes and diagnostics ***
[2026-01-29 08:32:48]     "exeErrorCode": 0,
[2026-01-29 08:32:48]     "exeErrorDiag": "",
[2026-01-29 08:32:48]     "pilotErrorCode": 0,
[2026-01-29 08:32:48]     "pilotErrorDiag": "",
[2026-01-29 08:32:48]  *** Listing of results directory ***
[2026-01-29 08:32:48] total 412208
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc    584422 26. Jan 02:12 pilot3.tar.gz
[2026-01-29 08:32:48] -rwx------ 1 boinc boinc     36322 26. Jan 02:15 runpilot2-wrapper.sh
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc      5111 26. Jan 02:18 queuedata.json
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc       100 29. Jan 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 08:32:48] -rwxr-xr-x 1 boinc boinc      7986 29. Jan 06:39 run_atlas
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc       105 29. Jan 06:39 job.xml
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc 250628891 29. Jan 06:39 EVNT.48330019._000009.pool.root.1
[2026-01-29 08:32:48] drwxrwx--x 1 boinc boinc        76 29. Jan 06:39 shared
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc    597772 29. Jan 06:39 input.tar.gz
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc     15845 29. Jan 06:39 start_atlas.sh
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc         0 29. Jan 06:39 boinc_setup_complete
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc      9370 29. Jan 06:39 init_data.xml
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc         0 29. Jan 06:39 boinc_lockfile
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc      2630 29. Jan 06:41 pandaJob.out
[2026-01-29 08:32:48] -rw------- 1 boinc boinc   1005755 29. Jan 06:41 agis_schedconf.cvmfs.json
[2026-01-29 08:32:48] -rw------- 1 boinc boinc   1516246 29. Jan 06:41 agis_ddmendpoints.agis.ALL.json
[2026-01-29 08:32:48] -rw------- 1 boinc boinc       418 29. Jan 06:41 workernode_map.json
[2026-01-29 08:32:48] drwx------ 1 boinc boinc       414 29. Jan 06:41 pilot3
[2026-01-29 08:32:48] -rw------- 1 boinc boinc 164981222 29. Jan 08:31 HITS.48330021._000222.pool.root.1
[2026-01-29 08:32:48] -rw------- 1 boinc boinc        95 29. Jan 08:31 pilot_heartbeat.json
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc       529 29. Jan 08:31 boinc_task_state.xml
[2026-01-29 08:32:48] -rw------- 1 boinc boinc      1010 29. Jan 08:31 memory_monitor_summary.json
[2026-01-29 08:32:48] -rw------- 1 boinc boinc    333866 29. Jan 08:31 log.48330021._000222.job.log.tgz.1
[2026-01-29 08:32:48] -rw------- 1 boinc boinc      6252 29. Jan 08:31 heartbeat.json
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc        27 29. Jan 08:32 wrapper_checkpoint.txt
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc      8192 29. Jan 08:32 boinc_mmap_file
[2026-01-29 08:32:48] -rw------- 1 boinc boinc      4551 29. Jan 08:32 pilotlog.txt
[2026-01-29 08:32:48] -rw------- 1 boinc boinc    946674 29. Jan 08:32 log.48330021._000222.job.log.1
[2026-01-29 08:32:48] -rw------- 1 boinc boinc       357 29. Jan 08:32 output.list
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc       620 29. Jan 08:32 runtime_log
[2026-01-29 08:32:48] -rw------- 1 boinc boinc   1300480 29. Jan 08:32 result.tar.gz
[2026-01-29 08:32:48] -rw------- 1 boinc boinc       640 29. Jan 08:32 X8cLDmZNQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3q8KDmeG35om.diag
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc      8789 29. Jan 08:32 runtime_log.err
[2026-01-29 08:32:48] -rw-r--r-- 1 boinc boinc     21588 29. Jan 08:32 stderr.txt
[2026-01-29 08:32:48] HITS file was successfully produced:
[2026-01-29 08:32:48] -rw------- 1 boinc boinc 164981222 29. Jan 08:31 shared/HITS.pool.root.1
[2026-01-29 08:32:48]  *** Contents of shared directory: ***
[2026-01-29 08:32:48] total 407744
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc 250628891 29. Jan 06:39 ATLAS.root_0
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc    597772 29. Jan 06:39 input.tar.gz
[2026-01-29 08:32:48] -rw-r--r-- 2 boinc boinc     15845 29. Jan 06:39 start_atlas.sh
[2026-01-29 08:32:48] -rw------- 1 boinc boinc 164981222 29. Jan 08:31 HITS.pool.root.1
[2026-01-29 08:32:48] -rw------- 1 boinc boinc   1300480 29. Jan 08:32 result.tar.gz
08:32:50 (1306531): run_atlas exited; CPU time 38215.174111
08:32:50 (1306531): called boinc_finish(0)

</stderr_txt>
]]>

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