Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:52:42 (26907): wrapper (7.7.26015): starting
00:52:42 (26907): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 00:52:42] Arguments: --nthreads 8
[2026-01-26 00:52:42] Threads: 8
[2026-01-26 00:52:42] Checking for CVMFS
[2026-01-26 00:52:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:52:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:52:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:52:42] 2.11.2.0 2466 205114 139540 155534 0 188 15005041 18432000 1833 130560 0 135203614 99.980 7898796 29611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 00:52:42] CVMFS is ok
[2026-01-26 00:52:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:52:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:52:42] Further information can be found at the LHC@home message board.
[2026-01-26 00:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:52:42] Checking for apptainer binary...
[2026-01-26 00:52:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:52:42] Running /usr/bin/apptainer --version
[2026-01-26 00:52:42] apptainer version 1.3.2-1.el7
[2026-01-26 00:52:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:52:43] c-206-20.aglt2.org
[2026-01-26 00:52:43] apptainer works
[2026-01-26 00:52:43] Set ATHENA_PROC_NUMBER=8
[2026-01-26 00:52:43] Set ATHENA_CORE_NUMBER=8
[2026-01-26 00:52:43] Starting ATLAS job with PandaID=6983602157
[2026-01-26 00:52:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:31:13 (13956): wrapper (7.7.26015): starting
06:31:13 (13956): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 06:31:13] Arguments: --nthreads 8
[2026-01-26 06:31:13] Threads: 8
[2026-01-26 06:31:13] This job has been restarted, cleaning up previous attempt
[2026-01-26 06:31:13] Checking for CVMFS
[2026-01-26 06:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:31:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:31:14] 2.11.2.0 2466 205452 137284 155545 2 11 15051343 18432000 1 130560 0 135369743 99.980 7913326 29618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 06:31:14] CVMFS is ok
[2026-01-26 06:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 06:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 06:31:14] Further information can be found at the LHC@home message board.
[2026-01-26 06:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:31:14] Checking for apptainer binary...
[2026-01-26 06:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 06:31:14] Running /usr/bin/apptainer --version
[2026-01-26 06:31:14] apptainer version 1.3.2-1.el7
[2026-01-26 06:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:31:15] c-206-20.aglt2.org
[2026-01-26 06:31:15] apptainer works
[2026-01-26 06:31:15] Set ATHENA_PROC_NUMBER=8
[2026-01-26 06:31:15] Set ATHENA_CORE_NUMBER=8
[2026-01-26 06:31:15] Starting ATLAS job with PandaID=6983602157
[2026-01-26 06:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:52:18]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:52:18] 2026-01-26 18:51:37,011 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:52:18] 2026-01-26 18:51:37,011 | INFO     | job 6983602157 has finished - writing final server update
[2026-01-26 13:52:18] 2026-01-26 18:51:37,012 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,016 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983602157/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,017 | INFO     | extracted standard info from prmon json
[2026-01-26 13:52:18] 2026-01-26 18:51:37,017 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:52:18] 2026-01-26 18:51:37,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:52:18] 2026-01-26 18:51:37,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:52:18] 2026-01-26 18:51:37,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:52:18] 2026-01-26 18:51:37,030 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:52:18] 2026-01-26 18:51:37,031 | INFO     | sum of square deviations: 25173279432.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,037 | INFO     | sum of deviations: 42253204035.999985
[2026-01-26 13:52:18] 2026-01-26 18:51:37,037 | INFO     | mean x: 1769440287.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,038 | INFO     | mean y: 2490573.4110854506
[2026-01-26 13:52:18] 2026-01-26 18:51:37,038 | INFO     | intersect: -2967504721.7227507
[2026-01-26 13:52:18] 2026-01-26 18:51:37,039 | INFO     | chi2: 2.207841470850995
[2026-01-26 13:52:18] 2026-01-26 18:51:37,039 | INFO     | sum of square deviations: 24311253967.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,046 | INFO     | sum of deviations: 70874286092.49998
[2026-01-26 13:52:18] 2026-01-26 18:51:37,046 | INFO     | mean x: 1769440134.5
[2026-01-26 13:52:18] 2026-01-26 18:51:37,046 | INFO     | mean y: 2495588.563084112
[2026-01-26 13:52:18] 2026-01-26 18:51:37,046 | INFO     | intersect: -5155930483.836667
[2026-01-26 13:52:18] 2026-01-26 18:51:37,047 | INFO     | chi2: 1.4133307697425102
[2026-01-26 13:52:18] 2026-01-26 18:51:37,047 | INFO     | current chi2=1.4133307697425102 (change=35.98585820576361 %)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,048 | INFO     | sum of square deviations: 23469135852.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,054 | INFO     | sum of deviations: 69953423961.99998
[2026-01-26 13:52:18] 2026-01-26 18:51:37,055 | INFO     | mean x: 1769439982.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,055 | INFO     | mean y: 2495421.7966903076
[2026-01-26 13:52:18] 2026-01-26 18:51:37,055 | INFO     | intersect: -5271596731.264474
[2026-01-26 13:52:18] 2026-01-26 18:51:37,056 | INFO     | chi2: 1.413476711698201
[2026-01-26 13:52:18] 2026-01-26 18:51:37,056 | INFO     | current chi2=1.413476711698201 (change=-0.010326100500693918 %)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,056 | INFO     | right removable region: 422
[2026-01-26 13:52:18] 2026-01-26 18:51:37,057 | INFO     | sum of square deviations: 24311253967.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,063 | INFO     | sum of deviations: -20790136754.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,063 | INFO     | mean x: 1769440439.5
[2026-01-26 13:52:18] 2026-01-26 18:51:37,064 | INFO     | mean y: 2501671.3271028036
[2026-01-26 13:52:18] 2026-01-26 18:51:37,064 | INFO     | intersect: 1515665441.7026365
[2026-01-26 13:52:18] 2026-01-26 18:51:37,064 | INFO     | chi2: 0.9278160278979796
[2026-01-26 13:52:18] 2026-01-26 18:51:37,065 | INFO     | current chi2=0.9278160278979796 (change=57.976329362979115 %)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,065 | INFO     | sum of square deviations: 23469135852.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,070 | INFO     | sum of deviations: -40352147576.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,070 | INFO     | mean x: 1769440592.0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,070 | INFO     | mean y: 2505213.959810875
[2026-01-26 13:52:18] 2026-01-26 18:51:37,070 | INFO     | intersect: 3044829752.2646227
[2026-01-26 13:52:18] 2026-01-26 18:51:37,071 | INFO     | chi2: 0.8519446898107919
[2026-01-26 13:52:18] 2026-01-26 18:51:37,071 | INFO     | current chi2=0.8519446898107919 (change=8.177411879710526 %)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,071 | INFO     | left removable region: 20
[2026-01-26 13:52:18] 2026-01-26 18:51:37,071 | INFO     | sum of square deviations: 20144379560.5
[2026-01-26 13:52:18] 2026-01-26 18:51:37,074 | INFO     | sum of deviations: -17355706518.999996
[2026-01-26 13:52:18] 2026-01-26 18:51:37,075 | INFO     | mean x: 1769440561.5
[2026-01-26 13:52:18] 2026-01-26 18:51:37,075 | INFO     | mean y: 2511699.7412935323
[2026-01-26 13:52:18] 2026-01-26 18:51:37,075 | INFO     | intersect: 1527000999.3981512
[2026-01-26 13:52:18] 2026-01-26 18:51:37,075 | INFO     | chi2: 0.03132387888377913
[2026-01-26 13:52:18] 2026-01-26 18:51:37,075 | INFO     | current memory leak: -0.86 B/s (using 402 data points, chi2=0.03)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | could have reported an average CPU frequency of 2444 MHz (18 samples)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | ..............................
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | . Timing measurements:
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | . get job = 0 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | . initial setup = 2 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,076 | INFO     | . payload setup = 5 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,077 | INFO     | . stage-in = 0 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,077 | INFO     | . payload execution = 26381 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,077 | INFO     | . stage-out = 2 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,077 | INFO     | . log creation = 0 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,077 | INFO     | ..............................
[2026-01-26 13:52:18] 2026-01-26 18:51:37,447 | INFO     | 
[2026-01-26 13:52:18] 2026-01-26 18:51:37,447 | INFO     | job summary report
[2026-01-26 13:52:18] 2026-01-26 18:51:37,447 | INFO     | --------------------------------------------------
[2026-01-26 13:52:18] 2026-01-26 18:51:37,447 | INFO     | PanDA job id: 6983602157
[2026-01-26 13:52:18] 2026-01-26 18:51:37,447 | INFO     | task id: 48329784
[2026-01-26 13:52:18] 2026-01-26 18:51:37,448 | INFO     | errors: (none)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,448 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:52:18] 2026-01-26 18:51:37,448 | INFO     | pilot state: finished 
[2026-01-26 13:52:18] 2026-01-26 18:51:37,448 | INFO     | transexitcode: 0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,448 | INFO     | exeerrorcode: 0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | exeerrordiag: 
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | exitcode: 0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | exitmsg: OK
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | cpuconsumptiontime: 201650 s
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | nevents: 400
[2026-01-26 13:52:18] 2026-01-26 18:51:37,449 | INFO     | neventsw: 0
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | pid: 489
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | pgrp: 489
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | corecount: 8
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | event service: False
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | sizes: {0: 2284237, 1: 2284471, 11: 2284471, 26391: 2320844, 26394: 2329898, 26396: 2330064}
[2026-01-26 13:52:18] 2026-01-26 18:51:37,453 | INFO     | --------------------------------------------------
[2026-01-26 13:52:18] 2026-01-26 18:51:37,454 | INFO     | 
[2026-01-26 13:52:18] 2026-01-26 18:51:37,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 13:52:18] 2026-01-26 18:51:37,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:52:18] 2026-01-26 18:51:37,475 | INFO     | job 6983602157 has completed (purged errors)
[2026-01-26 13:52:18] 2026-01-26 18:51:37,475 | INFO     | overall cleanup function is called
[2026-01-26 13:52:18] 2026-01-26 18:51:38,483 | INFO     | --- collectZombieJob: --- 10, [489]
[2026-01-26 13:52:18] 2026-01-26 18:51:38,483 | INFO     | zombie collector waiting for pid 489
[2026-01-26 13:52:18] 2026-01-26 18:51:38,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:52:18] 2026-01-26 18:51:38,483 | INFO     | collected zombie processes
[2026-01-26 13:52:18] 2026-01-26 18:51:38,483 | INFO     | will attempt to kill all subprocesses of pid=489
[2026-01-26 13:52:18] 2026-01-26 18:51:38,640 | INFO     | process IDs to be killed: [489] (in reverse order)
[2026-01-26 13:52:18] 2026-01-26 18:51:38,695 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:52:18] 2026-01-26 18:51:38,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:52:18] 2026-01-26 18:51:38,700 | INFO     | did not find any defunct processes belonging to 489
[2026-01-26 13:52:18] 2026-01-26 18:51:38,704 | INFO     | did not find any defunct processes belonging to 489
[2026-01-26 13:52:18] 2026-01-26 18:51:38,705 | INFO     | ready for new job
[2026-01-26 13:52:18] 2026-01-26 18:51:38,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:52:18] 2026-01-26 18:51:38,708 | INFO     | **************************************
[2026-01-26 13:52:18] 2026-01-26 18:51:38,708 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:52:18] 2026-01-26 18:51:38,708 | INFO     | **************************************
[2026-01-26 13:52:18] 2026-01-26 18:51:38,708 | INFO     | 
[2026-01-26 13:52:18] 2026-01-26 18:51:38,709 | INFO     | architecture information:
[2026-01-26 13:52:18] 2026-01-26 18:51:38,710 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:52:18] 2026-01-26 18:51:38,723 | INFO     | cat /etc/os-release:
[2026-01-26 13:52:18] NAME="CentOS Linux"
[2026-01-26 13:52:18] VERSION="7 (Core)"
[2026-01-26 13:52:18] ID="centos"
[2026-01-26 13:52:18] ID_LIKE="rhel fedora"
[2026-01-26 13:52:18] VERSION_ID="7"
[2026-01-26 13:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:52:18] ANSI_COLOR="0;31"
[2026-01-26 13:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:52:18] HOME_URL="https://www.centos.org/"
[2026-01-26 13:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:52:18] 
[2026-01-26 13:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:52:18] 
[2026-01-26 13:52:18] 2026-01-26 18:51:38,723 | INFO     | **************************************
[2026-01-26 13:52:18] 2026-01-26 18:51:39,226 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 13:52:18] 2026-01-26 18:51:39,249 | INFO     | sufficient remaining disk space (26956791808 B)
[2026-01-26 13:52:18] 2026-01-26 18:51:39,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:52:18] 2026-01-26 18:51:39,250 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:52:18] 2026-01-26 18:51:39,250 | INFO     | update_server=False
[2026-01-26 13:52:18] 2026-01-26 18:51:39,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:52:18] 2026-01-26 18:51:39,393 | INFO     | all data control threads have been joined
[2026-01-26 13:52:18] 2026-01-26 18:51:39,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:52:18] 2026-01-26 18:51:39,677 | INFO     | aborting loop
[2026-01-26 13:52:18] 2026-01-26 18:51:39,733 | INFO     | all payload control threads have been joined
[2026-01-26 13:52:18] 2026-01-26 18:51:40,137 | INFO     | all job control threads have been joined
[2026-01-26 13:52:18] 2026-01-26 18:51:40,258 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:40,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:52:18] 2026-01-26 18:51:40,265 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:40,399 | INFO     | [data] control thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:40,430 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:40,682 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:40,739 | INFO     | [payload] control thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,092 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,142 | INFO     | [job] control thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,207 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,225 | INFO     | [job] validate thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,228 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:41,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:52:18] 2026-01-26 18:51:41,396 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:42,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:52:18] 2026-01-26 18:51:42,265 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:43,213 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:45,282 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:51:50,048 | INFO     | job.realtimelogging is not enabled
[2026-01-26 13:52:18] 2026-01-26 18:51:51,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:52:18] 2026-01-26 18:52:10,027 | INFO     | PID=25405 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 13:52:18] 2026-01-26 18:52:10,028 | INFO     | .. there are 3 such processes running
[2026-01-26 13:52:18] 2026-01-26 18:52:10,028 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:52:18] 2026-01-26 18:52:10,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:52:18] 2026-01-26 18:52:10,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:52:18] 2026-01-26 18:52:12,279 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:52:18] 2026-01-26 18:52:13,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679664301888)>', '<ExcThread(monitor, started 139679206713088)>']
[2026-01-26 13:52:18] 2026-01-26 18:52:14,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:52:18] 2026-01-26 18:52:14,057 | INFO     | [monitor] control thread has ended
[2026-01-26 13:52:18] 2026-01-26 18:52:18,468 | INFO     | all workflow threads have been joined
[2026-01-26 13:52:18] 2026-01-26 18:52:18,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:52:18] 2026-01-26 18:52:18,468 | INFO     | traces error code: 0
[2026-01-26 13:52:18] 2026-01-26 18:52:18,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:52:18] 2026-01-26 18:52:18,593 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:52:18] 2026-01-26 18:52:18,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:52:18] 2026-01-26 18:52:18,598 [wrapper] pilotpid: 25405
[2026-01-26 13:52:18] 2026-01-26 18:52:18,600 [wrapper] Pilot exit status: 0
[2026-01-26 13:52:18] 2026-01-26 18:52:18,611 [wrapper] pandaids: 6983602157 6983602157
[2026-01-26 13:52:18] 2026-01-26 18:52:18,638 [wrapper] cleanup supervisor_pilot 10435 25407
[2026-01-26 13:52:18] 2026-01-26 18:52:18,640 [wrapper] Test setup, not cleaning
[2026-01-26 13:52:18] 2026-01-26 18:52:18,642 [wrapper] apfmon messages muted
[2026-01-26 13:52:18] 2026-01-26 18:52:18,644 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:52:18] 2026-01-26 18:52:18,647 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:52:18]  *** Error codes and diagnostics ***
[2026-01-26 13:52:18]     "exeErrorCode": 0,
[2026-01-26 13:52:18]     "exeErrorDiag": "",
[2026-01-26 13:52:18]     "pilotErrorCode": 0,
[2026-01-26 13:52:18]     "pilotErrorDiag": "",
[2026-01-26 13:52:18]  *** Listing of results directory ***
[2026-01-26 13:52:18] total 744108
[2026-01-26 13:52:18] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 13:52:18] -rwx------ 1 boincer umatlas     36322 Jan 25 20:15 runpilot2-wrapper.sh
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:18 queuedata.json
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas       100 Jan 26 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:52:18] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 00:52 run_atlas
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas       105 Jan 26 00:52 job.xml
[2026-01-26 13:52:18] -rw-r--r-- 3 boincer umatlas 271971245 Jan 26 00:52 EVNT.48329782._000004.pool.root.1
[2026-01-26 13:52:18] -rw-r--r-- 3 boincer umatlas 271971245 Jan 26 00:52 ATLAS.root_0
[2026-01-26 13:52:18] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 00:52 start_atlas.sh
[2026-01-26 13:52:18] drwxrwx--x 2 boincer umatlas      4096 Jan 26 00:52 shared
[2026-01-26 13:52:18] -rw-r--r-- 2 boincer umatlas    597797 Jan 26 00:52 input.tar.gz
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas         0 Jan 26 00:52 boinc_lockfile
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas      2693 Jan 26 06:31 pandaJob.out
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas        57 Jan 26 06:31 setup.sh.local
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas   1002189 Jan 26 06:31 agis_schedconf.cvmfs.json
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas       435 Jan 26 06:31 workernode_map.json
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 13:49 init_data.xml
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas 205489012 Jan 26 13:50 HITS.48329784._000083.pool.root.1
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas       532 Jan 26 13:51 boinc_task_state.xml
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas      1054 Jan 26 13:51 memory_monitor_summary.json
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas   1516246 Jan 26 13:51 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas    628985 Jan 26 13:51 log.48329784._000083.job.log.tgz.1
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas      6405 Jan 26 13:51 heartbeat.json
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas        29 Jan 26 13:51 wrapper_checkpoint.txt
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 13:51 boinc_mmap_file
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas        96 Jan 26 13:52 pilot_heartbeat.json
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas      4889 Jan 26 13:52 pilotlog.txt
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas   3667348 Jan 26 13:52 log.48329784._000083.job.log.1
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas       357 Jan 26 13:52 output.list
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas       620 Jan 26 13:52 runtime_log
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas   4311040 Jan 26 13:52 result.tar.gz
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas       788 Jan 26 13:52 x03MDmONQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaI2KDmtZFv4m.diag
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas      9427 Jan 26 13:52 runtime_log.err
[2026-01-26 13:52:18] -rw-r--r-- 1 boincer umatlas     23134 Jan 26 13:52 stderr.txt
[2026-01-26 13:52:18] HITS file was successfully produced:
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas 205489012 Jan 26 13:50 shared/HITS.pool.root.1
[2026-01-26 13:52:18]  *** Contents of shared directory: ***
[2026-01-26 13:52:18] total 471092
[2026-01-26 13:52:18] -rw-r--r-- 3 boincer umatlas 271971245 Jan 26 00:52 ATLAS.root_0
[2026-01-26 13:52:18] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 00:52 start_atlas.sh
[2026-01-26 13:52:18] -rw-r--r-- 2 boincer umatlas    597797 Jan 26 00:52 input.tar.gz
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas 205489012 Jan 26 13:50 HITS.pool.root.1
[2026-01-26 13:52:18] -rw------- 1 boincer umatlas   4311040 Jan 26 13:52 result.tar.gz
13:52:19 (13956): run_atlas exited; CPU time 202066.245998
13:52:19 (13956): called boinc_finish(0)

</stderr_txt>
]]>

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