Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:51:55 (2365241): wrapper (7.7.26015): starting
09:51:55 (2365241): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 09:51:55] Arguments: --nthreads 12
[2026-01-26 09:51:55] Threads: 12
[2026-01-26 09:51:55] Checking for CVMFS
[2026-01-26 09:51:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:51:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:51:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:51:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:51:57] 2.13.3.0 3240885 3533 62688 155551 3 188 5278461 6144000 5165 130560 0 10818160 99.998 126167 319 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 09:51:57] CVMFS is ok
[2026-01-26 09:51:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:51:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 09:51:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 09:51:57] Further information can be found at the LHC@home message board.
[2026-01-26 09:51:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:51:57] Checking for apptainer binary...
[2026-01-26 09:51:57] apptainer is not installed, using version from CVMFS
[2026-01-26 09:51:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:51:58] XeonFire
[2026-01-26 09:51:58] apptainer works
[2026-01-26 09:51:58] Set ATHENA_PROC_NUMBER=12
[2026-01-26 09:51:58] Set ATHENA_CORE_NUMBER=12
[2026-01-26 09:51:59] Starting ATLAS job with PandaID=6983771466
[2026-01-26 09:51:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:05:45]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:05:45]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/log.48310670._010680.job.log.tgz.1
[2026-01-26 11:05:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/d1/log.48310670._010680.job.log.tgz.1
[2026-01-26 11:05:45]  workdir=None
[2026-01-26 11:05:45] ]
[2026-01-26 11:05:45] 2026-01-26 17:05:11,050 | INFO     | transferring file log.48310670._010680.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/log.48310670._010680.job.log.tgz.1 to /var/lib/boinc
[2026-01-26 11:05:45] 2026-01-26 17:05:11,050 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/log.48310670._010680.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.483106
[2026-01-26 11:05:45] 2026-01-26 17:05:11,070 | INFO     | adding to output.list: log.48310670._010680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/d1/log.48310670._010680.job.log.tg
[2026-01-26 11:05:45] 2026-01-26 17:05:11,071 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 11:05:45] 2026-01-26 17:05:11,071 | INFO     | summary of transferred files:
[2026-01-26 11:05:45] 2026-01-26 17:05:11,071 | INFO     |  -- lfn=log.48310670._010680.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 11:05:45] 2026-01-26 17:05:11,072 | INFO     | stage-out finished correctly
[2026-01-26 11:05:45] 2026-01-26 17:05:11,490 | WARNING  | process 2374091 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 11:05:45] 2026-01-26 17:05:11,491 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,491 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,491 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 11:05:45] 2026-01-26 17:05:11,492 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 11:05:45] 2026-01-26 17:05:11,492 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4798146 B
[2026-01-26 11:05:45] 2026-01-26 17:05:11,492 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15845 B
[2026-01-26 11:05:45] 2026-01-26 17:05:11,492 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-26 11:05:45] 2026-01-26 17:05:11,506 | INFO     | sufficient remaining disk space (1672061386752 B)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,506 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,507 | INFO     | size of work directory /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466: 5095770 B (within 5033164800 B limit)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,508 | INFO     | pfn file=/var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/HITS.48310670._010680.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,508 | INFO     | total size of present files: 0 B (workdir size: 5095770 B)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,508 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/HITS.48310670._010680.pool.root.1 since it does not exist
[2026-01-26 11:05:45] 2026-01-26 17:05:11,725 | INFO     | time since job start (4359s) is within the limit (349056.0s)
[2026-01-26 11:05:45] 2026-01-26 17:05:11,903 | INFO     | number of running child processes to parent process 2374091: 1
[2026-01-26 11:05:45] 2026-01-26 17:05:11,903 | INFO     | maximum number of monitored processes: 6
[2026-01-26 11:05:45] 2026-01-26 17:05:13,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 11:05:45] 2026-01-26 17:05:13,537 | INFO     | job 6983771466 has state=finished
[2026-01-26 11:05:45] 2026-01-26 17:05:13,538 | INFO     | preparing for final server update for job 6983771466 in state='finished'
[2026-01-26 11:05:45] 2026-01-26 17:05:13,538 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/jobReport.json
[2026-01-26 11:05:45] 2026-01-26 17:05:13,540 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-01-26 11:05:45] 2026-01-26 17:05:13,540 | INFO     | this job has now completed (state=finished)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,540 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,541 | INFO     | log transfer has been attempted: DONE
[2026-01-26 11:05:45] 2026-01-26 17:05:13,541 | INFO     | job 6983771466 has finished - writing final server update
[2026-01-26 11:05:45] 2026-01-26 17:05:13,541 | INFO     | total number of processed events: 400 (read)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,554 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983771466/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,555 | INFO     | extracted standard info from prmon json
[2026-01-26 11:05:45] 2026-01-26 17:05:13,555 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:05:45] 2026-01-26 17:05:13,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:05:45] 2026-01-26 17:05:13,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:05:45] 2026-01-26 17:05:13,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | sum of square deviations: 85136480.0
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | sum of deviations: 10293952032.0
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | mean x: 1769445030.0
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | mean y: 2591438.0153846154
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | intersect: -213943090390.5122
[2026-01-26 11:05:45] 2026-01-26 17:05:13,557 | INFO     | chi2: 0.8743156885753172
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | current memory leak: 120.91 B/s (using 65 data points, chi2=0.87)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | could have reported an average CPU frequency of 2072 MHz (6 samples)
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | ..............................
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . Timing measurements:
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . get job = 0 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . initial setup = 22 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . payload setup = 5 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . stage-in = 0 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,558 | INFO     | . payload execution = 4337 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,559 | INFO     | . stage-out = 0 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,559 | INFO     | . log creation = 0 s
[2026-01-26 11:05:45] 2026-01-26 17:05:13,559 | INFO     | ..............................
[2026-01-26 11:05:45] 2026-01-26 17:05:13,732 | INFO     | time since job start (4361s) is within the limit (349056.0s)
[2026-01-26 11:05:45] 2026-01-26 17:05:14,036 | INFO     | 
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | job summary report
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | --------------------------------------------------
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | PanDA job id: 6983771466
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | task id: 48310670
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | errors: (none)
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | pilot state: finished 
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | transexitcode: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | exeerrorcode: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:14,037 | INFO     | exeerrordiag: 
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | exitcode: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | exitmsg: OK
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | cpuconsumptiontime: 43716 s
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | nevents: 400
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | neventsw: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | pid: 2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | pgrp: 2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | corecount: 12
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | event service: False
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | sizes: {0: 2283101, 1: 2284226, 12: 2284226, 4346: 2310191, 4347: 2319203, 4350: 2319609}
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | --------------------------------------------------
[2026-01-26 11:05:45] 2026-01-26 17:05:14,038 | INFO     | 
[2026-01-26 11:05:45] 2026-01-26 17:05:14,039 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-26 11:05:45] 2026-01-26 17:05:14,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,066 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,066 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,066 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | job 6983771466 has completed (purged errors)
[2026-01-26 11:05:45] 2026-01-26 17:05:14,068 | INFO     | overall cleanup function is called
[2026-01-26 11:05:45] 2026-01-26 17:05:15,077 | INFO     | --- collectZombieJob: --- 10, [2374091]
[2026-01-26 11:05:45] 2026-01-26 17:05:15,077 | INFO     | zombie collector waiting for pid 2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:15,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:05:45] 2026-01-26 17:05:15,077 | INFO     | collected zombie processes
[2026-01-26 11:05:45] 2026-01-26 17:05:15,077 | INFO     | will attempt to kill all subprocesses of pid=2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:15,364 | INFO     | PID=2369292 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 11:05:45] 2026-01-26 17:05:15,364 | INFO     | .. there are 5 such processes running
[2026-01-26 11:05:45] 2026-01-26 17:05:15,627 | INFO     | process IDs to be killed: [2374091] (in reverse order)
[2026-01-26 11:05:45] 2026-01-26 17:05:15,767 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:05:45] 2026-01-26 17:05:15,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:05:45] 2026-01-26 17:05:15,779 | INFO     | did not find any defunct processes belonging to 2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:15,790 | INFO     | did not find any defunct processes belonging to 2374091
[2026-01-26 11:05:45] 2026-01-26 17:05:15,790 | INFO     | ready for new job
[2026-01-26 11:05:45] 2026-01-26 17:05:15,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:05:45] 2026-01-26 17:05:15,792 | INFO     | **************************************
[2026-01-26 11:05:45] 2026-01-26 17:05:15,792 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:05:45] 2026-01-26 17:05:15,792 | INFO     | **************************************
[2026-01-26 11:05:45] 2026-01-26 17:05:15,793 | INFO     | 
[2026-01-26 11:05:45] 2026-01-26 17:05:15,798 | INFO     | architecture information:
[2026-01-26 11:05:45] 2026-01-26 17:05:15,798 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:05:45] 2026-01-26 17:05:15,815 | INFO     | cat /etc/os-release:
[2026-01-26 11:05:45] NAME="CentOS Linux"
[2026-01-26 11:05:45] VERSION="7 (Core)"
[2026-01-26 11:05:45] ID="centos"
[2026-01-26 11:05:45] ID_LIKE="rhel fedora"
[2026-01-26 11:05:45] VERSION_ID="7"
[2026-01-26 11:05:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:05:45] ANSI_COLOR="0;31"
[2026-01-26 11:05:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:05:45] HOME_URL="https://www.centos.org/"
[2026-01-26 11:05:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:05:45] 
[2026-01-26 11:05:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:05:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:05:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:05:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:05:45] 
[2026-01-26 11:05:45] 2026-01-26 17:05:15,815 | INFO     | **************************************
[2026-01-26 11:05:45] 2026-01-26 17:05:16,318 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-26 11:05:45] 2026-01-26 17:05:16,336 | INFO     | sufficient remaining disk space (1672056143872 B)
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | INFO     | update_server=False
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 11:05:45] 2026-01-26 17:05:16,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:45] 2026-01-26 17:05:16,338 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:05:45] 2026-01-26 17:05:16,338 | INFO     | aborting loop
[2026-01-26 11:05:45] 2026-01-26 17:05:16,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:05:45] 2026-01-26 17:05:16,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:05:45] 2026-01-26 17:05:16,521 | INFO     | all job control threads have been joined
[2026-01-26 11:05:45] 2026-01-26 17:05:16,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:05:45] 2026-01-26 17:05:17,150 | INFO     | all data control threads have been joined
[2026-01-26 11:05:45] 2026-01-26 17:05:17,339 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:17,342 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:17,458 | INFO     | all payload control threads have been joined
[2026-01-26 11:05:45] 2026-01-26 17:05:17,526 | INFO     | [job] control thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:17,962 | INFO     | [job] validate thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,156 | INFO     | [data] control thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,217 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,435 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,459 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,463 | INFO     | [payload] control thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:05:45] 2026-01-26 17:05:18,687 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,739 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:18,834 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:19,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:05:45] 2026-01-26 17:05:19,657 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:23,548 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:05:45] 2026-01-26 17:05:38,525 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:05:45] 2026-01-26 17:05:39,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258570585920)>', '<ExcThread(monitor, started 140257525757696)>']
[2026-01-26 11:05:45] 2026-01-26 17:05:39,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:05:45] 2026-01-26 17:05:39,448 | INFO     | [monitor] control thread has ended
[2026-01-26 11:05:45] 2026-01-26 17:05:44,111 | INFO     | all workflow threads have been joined
[2026-01-26 11:05:45] 2026-01-26 17:05:44,111 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:05:45] 2026-01-26 17:05:44,111 | INFO     | traces error code: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:44,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:05:45] 2026-01-26 17:05:44,199 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:05:45] 2026-01-26 17:05:44,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:05:45] 2026-01-26 17:05:44,206 [wrapper] pilotpid: 2369292
[2026-01-26 11:05:45] 2026-01-26 17:05:44,209 [wrapper] Pilot exit status: 0
[2026-01-26 11:05:45] 2026-01-26 17:05:44,220 [wrapper] pandaids: 6983771466
[2026-01-26 11:05:45] 2026-01-26 17:05:44,290 [wrapper] cleanup supervisor_pilot 2383177 2369293
[2026-01-26 11:05:45] 2026-01-26 17:05:44,293 [wrapper] Test setup, not cleaning
[2026-01-26 11:05:45] 2026-01-26 17:05:44,296 [wrapper] apfmon messages muted
[2026-01-26 11:05:45] 2026-01-26 17:05:44,299 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:05:45] 2026-01-26 17:05:44,301 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:05:45]  *** Error codes and diagnostics ***
[2026-01-26 11:05:45]     "exeErrorCode": 0,
[2026-01-26 11:05:45]     "exeErrorDiag": "",
[2026-01-26 11:05:45]     "pilotErrorCode": 0,
[2026-01-26 11:05:45]     "pilotErrorDiag": "",
[2026-01-26 11:05:45]  *** Listing of results directory ***
[2026-01-26 11:05:45] total 662496
[2026-01-26 11:05:45] -rw-r--r-- 1 mark mark    584422 Jan 25 19:12 pilot3.tar.gz
[2026-01-26 11:05:45] -rwx------ 1 mark mark     36322 Jan 25 19:15 runpilot2-wrapper.sh
[2026-01-26 11:05:45] -rw-r--r-- 1 mark mark      5111 Jan 25 19:18 queuedata.json
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark       100 Jan 26 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:05:45] -rwxr-xr-x 1 mark mark      7986 Jan 26 09:51 run_atlas
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark       105 Jan 26 09:51 job.xml
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark 491587944 Jan 26 09:51 EVNT.48310665._000160.pool.root.1
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark     15845 Jan 26 09:51 start_atlas.sh
[2026-01-26 11:05:45] drwxrwx--x 2 mark mark      4096 Jan 26 09:51 shared
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark    597776 Jan 26 09:51 input.tar.gz
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark      9264 Jan 26 09:51 init_data.xml
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark         0 Jan 26 09:51 boinc_setup_complete
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark         0 Jan 26 09:51 boinc_lockfile
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark      2522 Jan 26 09:51 pandaJob.out
[2026-01-26 11:05:45] -rw------- 1 mark mark   1002189 Jan 26 09:52 agis_schedconf.cvmfs.json
[2026-01-26 11:05:45] -rw------- 1 mark mark   1516246 Jan 26 09:52 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:05:45] -rw------- 1 mark mark       432 Jan 26 09:52 workernode_map.json
[2026-01-26 11:05:45] drwx------ 5 mark mark      4096 Jan 26 09:52 pilot3
[2026-01-26 11:05:45] -rw------- 1 mark mark 180777772 Jan 26 11:04 HITS.48310670._010680.pool.root.1
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark       530 Jan 26 11:04 boinc_task_state.xml
[2026-01-26 11:05:45] -rw------- 1 mark mark        95 Jan 26 11:04 pilot_heartbeat.json
[2026-01-26 11:05:45] -rw------- 1 mark mark      1035 Jan 26 11:05 memory_monitor_summary.json
[2026-01-26 11:05:45] -rw------- 1 mark mark    401199 Jan 26 11:05 log.48310670._010680.job.log.tgz.1
[2026-01-26 11:05:45] -rw------- 1 mark mark      6341 Jan 26 11:05 heartbeat.json
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark        27 Jan 26 11:05 wrapper_checkpoint.txt
[2026-01-26 11:05:45] -rw------- 1 mark mark      4557 Jan 26 11:05 pilotlog.txt
[2026-01-26 11:05:45] -rw------- 1 mark mark    642922 Jan 26 11:05 log.48310670._010680.job.log.1
[2026-01-26 11:05:45] -rw------- 1 mark mark       357 Jan 26 11:05 output.list
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark       620 Jan 26 11:05 runtime_log
[2026-01-26 11:05:45] -rw------- 1 mark mark   1064960 Jan 26 11:05 result.tar.gz
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark      8886 Jan 26 11:05 runtime_log.err
[2026-01-26 11:05:45] -rw------- 1 mark mark       644 Jan 26 11:05 DzQMDmDNQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjn8KDmOW8F0n.diag
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark      8192 Jan 26 11:05 boinc_mmap_file
[2026-01-26 11:05:45] -rw-rw-r-- 1 mark mark     22780 Jan 26 11:05 stderr.txt
[2026-01-26 11:05:45] HITS file was successfully produced:
[2026-01-26 11:05:45] -rw------- 1 mark mark 180777772 Jan 26 11:04 shared/HITS.pool.root.1
[2026-01-26 11:05:45]  *** Contents of shared directory: ***
[2026-01-26 11:05:45] total 658260
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark 491587944 Jan 26 09:51 ATLAS.root_0
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark     15845 Jan 26 09:51 start_atlas.sh
[2026-01-26 11:05:45] -rw-r--r-- 2 mark mark    597776 Jan 26 09:51 input.tar.gz
[2026-01-26 11:05:45] -rw------- 1 mark mark 180777772 Jan 26 11:04 HITS.pool.root.1
[2026-01-26 11:05:45] -rw------- 1 mark mark   1064960 Jan 26 11:05 result.tar.gz
11:05:46 (2365241): run_atlas exited; CPU time 43906.728749
11:05:46 (2365241): called boinc_finish(0)

</stderr_txt>
]]>

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