Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:42:07 (824195): wrapper (7.7.26015): starting
02:42:07 (824195): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 02:42:07] Arguments: --nthreads 12
[2026-01-28 02:42:07] Threads: 12
[2026-01-28 02:42:07] Checking for CVMFS
[2026-01-28 02:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 02:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 02:42:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 02:42:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 02:42:07] 2.13.1.0 2951 5141 65156 155607 2 187 2225731 4096001 855 130560 0 2415926 99.983 194417 726 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-28 02:42:07] CVMFS is ok
[2026-01-28 02:42:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 02:42:07] Checking for apptainer binary...
[2026-01-28 02:42:07] apptainer is not installed, using version from CVMFS
[2026-01-28 02:42:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 02:42:07] g3250
[2026-01-28 02:42:07] apptainer works
[2026-01-28 02:42:07] Set ATHENA_PROC_NUMBER=12
[2026-01-28 02:42:07] Set ATHENA_CORE_NUMBER=12
[2026-01-28 02:42:07] Starting ATLAS job with PandaID=6983771029
[2026-01-28 02:42:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 05:33:36]  *** The last 200 lines of the pilot log: ***
[2026-01-28 05:33:36] 2026-01-28 05:32:40,020 | INFO     | log transfer has been attempted: DONE
[2026-01-28 05:33:36] 2026-01-28 05:32:40,020 | INFO     | job 6983771029 has finished - writing final server update
[2026-01-28 05:33:36] 2026-01-28 05:32:40,020 | INFO     | total number of processed events: 400 (read)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,042 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983771029/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,043 | INFO     | extracted standard info from prmon json
[2026-01-28 05:33:36] 2026-01-28 05:32:40,043 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 05:33:36] 2026-01-28 05:32:40,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 05:33:36] 2026-01-28 05:32:40,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 05:33:36] 2026-01-28 05:32:40,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 05:33:36] 2026-01-28 05:32:40,048 | INFO     | fitting pss+swap vs Time
[2026-01-28 05:33:36] 2026-01-28 05:32:40,049 | INFO     | sum of square deviations: 1470248962.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,050 | INFO     | sum of deviations: 1928935137.4999924
[2026-01-28 05:33:36] 2026-01-28 05:32:40,051 | INFO     | mean x: 1769573243.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,051 | INFO     | mean y: 2668508.601190476
[2026-01-28 05:33:36] 2026-01-28 05:32:40,051 | INFO     | intersect: -2318973673.0900626
[2026-01-28 05:33:36] 2026-01-28 05:32:40,051 | INFO     | chi2: 1.9360772835940128
[2026-01-28 05:33:36] 2026-01-28 05:32:40,051 | INFO     | sum of square deviations: 1342841922.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | sum of deviations: 13019636198.999994
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | mean x: 1769573091.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | mean y: 2681456.8650306747
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | intersect: -17154362492.169434
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | chi2: 1.2337720192220132
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | current chi2=1.2337720192220132 (change=36.274650310874165 %)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | sum of square deviations: 1223016419.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | sum of deviations: 12634130198.500002
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | mean x: 1769572938.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | mean y: 2680966.069620253
[2026-01-28 05:33:36] 2026-01-28 05:32:40,052 | INFO     | intersect: -18277543685.281624
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | chi2: 1.2348195176985033
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | current chi2=1.2348195176985033 (change=-0.08490210996603996 %)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | right removable region: 157
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | sum of square deviations: 1342841922.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | sum of deviations: -20993919027.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | mean x: 1769573396.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | mean y: 2695581.1901840493
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | intersect: 27668111725.352985
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | chi2: 0.7781396055233082
[2026-01-28 05:33:36] 2026-01-28 05:32:40,053 | INFO     | current chi2=0.7781396055233082 (change=59.808442972957224 %)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | sum of square deviations: 1223016419.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | sum of deviations: -18248616436.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | mean x: 1769573548.5
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | mean y: 2692074.234177215
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | intersect: 26406482266.973064
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | chi2: 0.7757335992707797
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | current chi2=0.7757335992707797 (change=0.3091998190877903 %)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | left removable region: 20
[2026-01-28 05:33:36] 2026-01-28 05:32:40,054 | INFO     | sum of square deviations: 797291228.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | sum of deviations: -444553908.9999986
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | mean x: 1769573518.0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | mean y: 2696392.094890511
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | intersect: 989375784.8471954
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | chi2: 0.029526111760068665
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | current memory leak: -0.56 B/s (using 137 data points, chi2=0.03)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | could have reported an average CPU frequency of 2084 MHz (9 samples)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | ..............................
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . Timing measurements:
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . get job = 0 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . initial setup = 3 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . payload setup = 2 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . stage-in = 0 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,055 | INFO     | . payload execution = 10204 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,056 | INFO     | . stage-out = 0 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,056 | INFO     | . log creation = 0 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,056 | INFO     | ..............................
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | 
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | job summary report
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | --------------------------------------------------
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | PanDA job id: 6983771029
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | task id: 48318034
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | errors: (none)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | pilot state: finished 
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | transexitcode: 0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | exeerrorcode: 0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | exeerrordiag: 
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | exitcode: 0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | exitmsg: OK
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | cpuconsumptiontime: 38852 s
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | nevents: 400
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | neventsw: 0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | pid: 832372
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | pgrp: 832372
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | corecount: 12
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | event service: False
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | sizes: {0: 2283848, 1: 2284252, 11: 2284252, 10210: 2312999, 10211: 2322043, 10213: 2322099, 10214: 2322485}
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | --------------------------------------------------
[2026-01-28 05:33:36] 2026-01-28 05:32:40,091 | INFO     | 
[2026-01-28 05:33:36] 2026-01-28 05:32:40,092 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-28 05:33:36] 2026-01-28 05:32:40,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | job 6983771029 has completed (purged errors)
[2026-01-28 05:33:36] 2026-01-28 05:32:40,102 | INFO     | overall cleanup function is called
[2026-01-28 05:33:36] 2026-01-28 05:32:41,107 | INFO     | --- collectZombieJob: --- 10, [832372]
[2026-01-28 05:33:36] 2026-01-28 05:32:41,108 | INFO     | zombie collector waiting for pid 832372
[2026-01-28 05:33:36] 2026-01-28 05:32:41,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 05:33:36] 2026-01-28 05:32:41,108 | INFO     | collected zombie processes
[2026-01-28 05:33:36] 2026-01-28 05:32:41,108 | INFO     | will attempt to kill all subprocesses of pid=832372
[2026-01-28 05:33:36] 2026-01-28 05:32:41,148 | INFO     | process IDs to be killed: [832372] (in reverse order)
[2026-01-28 05:33:36] 2026-01-28 05:32:41,167 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 05:33:36] 2026-01-28 05:32:41,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 05:33:36] 2026-01-28 05:32:41,168 | INFO     | did not find any defunct processes belonging to 832372
[2026-01-28 05:33:36] 2026-01-28 05:32:41,169 | INFO     | did not find any defunct processes belonging to 832372
[2026-01-28 05:33:36] 2026-01-28 05:32:41,169 | INFO     | ready for new job
[2026-01-28 05:33:36] 2026-01-28 05:32:41,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 05:33:36] 2026-01-28 05:32:41,170 | INFO     | **************************************
[2026-01-28 05:33:36] 2026-01-28 05:32:41,171 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 05:33:36] 2026-01-28 05:32:41,171 | INFO     | **************************************
[2026-01-28 05:33:36] 2026-01-28 05:32:41,171 | INFO     | 
[2026-01-28 05:33:36] 2026-01-28 05:32:41,188 | INFO     | architecture information:
[2026-01-28 05:33:36] 2026-01-28 05:32:41,188 | INFO     | executing command: cat /etc/os-release
[2026-01-28 05:33:36] 2026-01-28 05:32:41,197 | INFO     | cat /etc/os-release:
[2026-01-28 05:33:36] NAME="CentOS Linux"
[2026-01-28 05:33:36] VERSION="7 (Core)"
[2026-01-28 05:33:36] ID="centos"
[2026-01-28 05:33:36] ID_LIKE="rhel fedora"
[2026-01-28 05:33:36] VERSION_ID="7"
[2026-01-28 05:33:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 05:33:36] ANSI_COLOR="0;31"
[2026-01-28 05:33:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 05:33:36] HOME_URL="https://www.centos.org/"
[2026-01-28 05:33:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 05:33:36] 
[2026-01-28 05:33:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 05:33:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 05:33:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 05:33:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 05:33:36] 
[2026-01-28 05:33:36] 2026-01-28 05:32:41,197 | INFO     | **************************************
[2026-01-28 05:33:36] 2026-01-28 05:32:41,698 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | INFO     | sufficient remaining disk space (28137488384 B)
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | INFO     | update_server=False
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 05:33:36] 2026-01-28 05:32:41,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:33:36] 2026-01-28 05:32:41,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:33:36] 2026-01-28 05:32:41,787 | INFO     | aborting loop
[2026-01-28 05:33:36] 2026-01-28 05:32:41,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 05:33:36] 2026-01-28 05:32:42,144 | INFO     | all data control threads have been joined
[2026-01-28 05:33:36] 2026-01-28 05:32:42,301 | INFO     | all job control threads have been joined
[2026-01-28 05:33:36] 2026-01-28 05:32:42,716 | INFO     | [job] retrieve thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:42,716 | INFO     | [job] queue monitor thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:42,792 | INFO     | [job] job monitor thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:42,967 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,009 | INFO     | all payload control threads have been joined
[2026-01-28 05:33:36] 2026-01-28 05:32:43,150 | INFO     | [data] control thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,306 | INFO     | [payload] validate_post thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,307 | INFO     | [job] control thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,602 | INFO     | [payload] failed_post thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,603 | INFO     | [job] validate thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,782 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,833 | INFO     | [data] copytool_out thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:43,847 | INFO     | [data] copytool_in thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:44,014 | INFO     | [payload] control thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:44,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 05:33:36] 2026-01-28 05:32:48,600 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:32:52,625 | INFO     | job.realtimelogging is not enabled
[2026-01-28 05:33:36] 2026-01-28 05:32:53,630 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 05:33:36] 2026-01-28 05:33:11,475 | INFO     | PID=827937 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 05:33:36] 2026-01-28 05:33:11,475 | INFO     | .. there are 2 such processes running
[2026-01-28 05:33:36] 2026-01-28 05:33:11,475 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 05:33:36] 2026-01-28 05:33:11,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 05:33:36] 2026-01-28 05:33:11,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 05:33:36] 2026-01-28 05:33:31,332 | INFO     | [monitor] cgroup control has ended
[2026-01-28 05:33:36] 2026-01-28 05:33:31,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038306916160)>', '<ExcThread(monitor, started 140037727442688)>']
[2026-01-28 05:33:36] 2026-01-28 05:33:32,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 05:33:36] 2026-01-28 05:33:32,571 | INFO     | [monitor] control thread has ended
[2026-01-28 05:33:36] 2026-01-28 05:33:36,623 | INFO     | all workflow threads have been joined
[2026-01-28 05:33:36] 2026-01-28 05:33:36,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 05:33:36] 2026-01-28 05:33:36,623 | INFO     | traces error code: 0
[2026-01-28 05:33:36] 2026-01-28 05:33:36,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 05:33:36] 2026-01-28 05:33:36,677 [wrapper] ==== pilot stdout END ====
[2026-01-28 05:33:36] 2026-01-28 05:33:36,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 05:33:36] 2026-01-28 05:33:36,679 [wrapper] pilotpid: 827937
[2026-01-28 05:33:36] 2026-01-28 05:33:36,680 [wrapper] Pilot exit status: 0
[2026-01-28 05:33:36] 2026-01-28 05:33:36,684 [wrapper] pandaids: 6983771029
[2026-01-28 05:33:36] 2026-01-28 05:33:36,693 [wrapper] cleanup supervisor_pilot  838475 827938
[2026-01-28 05:33:36] 2026-01-28 05:33:36,695 [wrapper] Test setup, not cleaning
[2026-01-28 05:33:36] 2026-01-28 05:33:36,696 [wrapper] apfmon messages muted
[2026-01-28 05:33:36] 2026-01-28 05:33:36,697 [wrapper] ==== wrapper stdout END ====
[2026-01-28 05:33:36] 2026-01-28 05:33:36,698 [wrapper] ==== wrapper stderr END ====
[2026-01-28 05:33:36]  *** Error codes and diagnostics ***
[2026-01-28 05:33:36]     "exeErrorCode": 0,
[2026-01-28 05:33:36]     "exeErrorDiag": "",
[2026-01-28 05:33:36]     "pilotErrorCode": 0,
[2026-01-28 05:33:36]     "pilotErrorDiag": "",
[2026-01-28 05:33:36]  *** Listing of results directory ***
[2026-01-28 05:33:36] total 674228
[2026-01-28 05:33:36] -rw-r--r-- 1 boinc boinc      5111 Jan 26 01:12 queuedata.json
[2026-01-28 05:33:36] -rw-r--r-- 1 boinc boinc    584422 Jan 26 01:12 pilot3.tar.gz
[2026-01-28 05:33:36] -rwx------ 1 boinc boinc     36322 Jan 26 01:12 runpilot2-wrapper.sh
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc       100 Jan 28 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 05:33:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 02:41 run_atlas
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc       105 Jan 28 02:41 job.xml
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc 498460037 Jan 28 02:42 EVNT.48318032._000056.pool.root.1
[2026-01-28 05:33:36] drwxrwx--x 2 boinc boinc      4096 Jan 28 02:42 shared
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc    597762 Jan 28 02:42 input.tar.gz
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:42 start_atlas.sh
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc      9393 Jan 28 02:42 init_data.xml
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc         0 Jan 28 02:42 boinc_setup_complete
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc         0 Jan 28 02:42 boinc_lockfile
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc      2533 Jan 28 02:42 pandaJob.out
[2026-01-28 05:33:36] -rw------- 1 boinc boinc   1005248 Jan 28 02:42 agis_schedconf.cvmfs.json
[2026-01-28 05:33:36] -rw------- 1 boinc boinc   1516246 Jan 28 02:42 agis_ddmendpoints.agis.ALL.json
[2026-01-28 05:33:36] -rw------- 1 boinc boinc       415 Jan 28 02:42 workernode_map.json
[2026-01-28 05:33:36] drwx------ 5 boinc boinc      4096 Jan 28 02:42 pilot3
[2026-01-28 05:33:36] -rw------- 1 boinc boinc 184005573 Jan 28 05:32 HITS.48318034._002149.pool.root.1
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc       531 Jan 28 05:32 boinc_task_state.xml
[2026-01-28 05:33:36] -rw------- 1 boinc boinc      1019 Jan 28 05:32 memory_monitor_summary.json
[2026-01-28 05:33:36] -rw------- 1 boinc boinc        95 Jan 28 05:32 pilot_heartbeat.json
[2026-01-28 05:33:36] -rw------- 1 boinc boinc    503244 Jan 28 05:32 log.48318034._002149.job.log.tgz.1
[2026-01-28 05:33:36] -rw------- 1 boinc boinc      6296 Jan 28 05:32 heartbeat.json
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc      8192 Jan 28 05:33 boinc_mmap_file
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc        28 Jan 28 05:33 wrapper_checkpoint.txt
[2026-01-28 05:33:36] -rw------- 1 boinc boinc      4913 Jan 28 05:33 pilotlog.txt
[2026-01-28 05:33:36] -rw------- 1 boinc boinc   1493744 Jan 28 05:33 log.48318034._002149.job.log.1
[2026-01-28 05:33:36] -rw------- 1 boinc boinc       357 Jan 28 05:33 output.list
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc       620 Jan 28 05:33 runtime_log
[2026-01-28 05:33:36] -rw------- 1 boinc boinc   2017280 Jan 28 05:33 result.tar.gz
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc      9152 Jan 28 05:33 runtime_log.err
[2026-01-28 05:33:36] -rw------- 1 boinc boinc       651 Jan 28 05:33 HzkKDmeKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmw91KDmvuxN4m.diag
[2026-01-28 05:33:36] -rw-rw-r-- 1 boinc boinc     20811 Jan 28 05:33 stderr.txt
[2026-01-28 05:33:36] HITS file was successfully produced:
[2026-01-28 05:33:36] -rw------- 1 boinc boinc 184005573 Jan 28 05:32 shared/HITS.pool.root.1
[2026-01-28 05:33:36]  *** Contents of shared directory: ***
[2026-01-28 05:33:36] total 669056
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc 498460037 Jan 28 02:42 ATLAS.root_0
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc    597762 Jan 28 02:42 input.tar.gz
[2026-01-28 05:33:36] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:42 start_atlas.sh
[2026-01-28 05:33:36] -rw------- 1 boinc boinc 184005573 Jan 28 05:32 HITS.pool.root.1
[2026-01-28 05:33:36] -rw------- 1 boinc boinc   2017280 Jan 28 05:33 result.tar.gz
05:33:37 (824195): run_atlas exited; CPU time 38895.712542
05:33:37 (824195): called boinc_finish(0)

</stderr_txt>
]]>

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