Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:41:07 (811208): wrapper (7.7.26015): starting
02:41:07 (811208): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 02:41:07] Arguments: --nthreads 12
[2026-01-28 02:41:07] Threads: 12
[2026-01-28 02:41:07] Checking for CVMFS
[2026-01-28 02:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 02:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 02:41:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 02:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 02:41:07] 2.13.1.0 2951 5140 63844 155607 3 50 2221916 4096000 394 130560 0 2380767 99.983 194317 726 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-28 02:41:07] CVMFS is ok
[2026-01-28 02:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 02:41:07] Checking for apptainer binary...
[2026-01-28 02:41:07] apptainer is not installed, using version from CVMFS
[2026-01-28 02:41:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 02:41:07] g3250
[2026-01-28 02:41:07] apptainer works
[2026-01-28 02:41:07] Set ATHENA_PROC_NUMBER=12
[2026-01-28 02:41:07] Set ATHENA_CORE_NUMBER=12
[2026-01-28 02:41:07] Starting ATLAS job with PandaID=6983771156
[2026-01-28 02:41:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 05:31:42]  *** The last 200 lines of the pilot log: ***
[2026-01-28 05:31:42] 2026-01-28 05:30:59,704 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 05:31:42] 2026-01-28 05:30:59,704 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 05:31:42] 2026-01-28 05:30:59,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 05:31:42] 2026-01-28 05:30:59,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | fitting pss+swap vs Time
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | sum of square deviations: 1444149868.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | sum of deviations: 5935019643.999988
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | mean x: 1769573158.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | mean y: 2680987.0898203594
[2026-01-28 05:31:42] 2026-01-28 05:30:59,706 | INFO     | intersect: -7269730060.36602
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | chi2: 1.2041267250213665
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | sum of square deviations: 1318277740.5
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | sum of deviations: 5563113105.499996
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | mean x: 1769573005.5
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | mean y: 2680537.438271605
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | intersect: -7464892095.853921
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | chi2: 1.2044142507120776
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | current chi2=1.2044142507120776 (change=-0.023878358044582736 %)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,707 | INFO     | right removable region: 161
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | sum of square deviations: 1318277740.5
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | sum of deviations: -14539506678.5
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | mean x: 1769573310.5
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | mean y: 2705364.25308642
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | intersect: 19519626704.63136
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | chi2: 0.0579915177745595
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | current chi2=0.0579915177745595 (change=95.18393566312295 %)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,708 | INFO     | sum of square deviations: 1199940638.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | sum of deviations: -11686586606.999994
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | mean x: 1769573463.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | mean y: 2701679.700636943
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | intersect: 17237115514.761036
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | chi2: 0.05506750604324057
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | current chi2=0.05506750604324057 (change=5.042136925413722 %)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | left removable region: 20
[2026-01-28 05:31:42] 2026-01-28 05:30:59,709 | INFO     | sum of square deviations: 869188390.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | sum of deviations: -4328875491.999998
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | mean x: 1769573585.0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | mean y: 2690869.4680851065
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | intersect: 8815813331.213202
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | chi2: 0.03292302787795417
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | current memory leak: -4.98 B/s (using 141 data points, chi2=0.03)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | could have reported an average CPU frequency of 1652 MHz (9 samples)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | ..............................
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . Timing measurements:
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . get job = 0 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . initial setup = 4 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . payload setup = 3 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . stage-in = 0 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . payload execution = 10159 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,710 | INFO     | . stage-out = 0 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,711 | INFO     | . log creation = 0 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,711 | INFO     | ..............................
[2026-01-28 05:31:42] 2026-01-28 05:30:59,748 | INFO     | 
[2026-01-28 05:31:42] 2026-01-28 05:30:59,748 | INFO     | job summary report
[2026-01-28 05:31:42] 2026-01-28 05:30:59,749 | INFO     | --------------------------------------------------
[2026-01-28 05:31:42] 2026-01-28 05:30:59,749 | INFO     | PanDA job id: 6983771156
[2026-01-28 05:31:42] 2026-01-28 05:30:59,749 | INFO     | task id: 48318034
[2026-01-28 05:31:42] 2026-01-28 05:30:59,749 | INFO     | errors: (none)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,749 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | pilot state: finished 
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | transexitcode: 0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | exeerrorcode: 0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | exeerrordiag: 
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | exitcode: 0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | exitmsg: OK
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | cpuconsumptiontime: 39061 s
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | nevents: 400
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | neventsw: 0
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | pid: 819736
[2026-01-28 05:31:42] 2026-01-28 05:30:59,750 | INFO     | pgrp: 819736
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | corecount: 12
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | event service: False
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | sizes: {0: 2284224, 11: 2284224, 10165: 2312943, 10167: 2321987, 10168: 2322043, 10170: 2322301}
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | --------------------------------------------------
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | 
[2026-01-28 05:31:42] 2026-01-28 05:30:59,751 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,761 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,762 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 05:31:42] 2026-01-28 05:30:59,762 | INFO     | job 6983771156 has completed (purged errors)
[2026-01-28 05:31:42] 2026-01-28 05:30:59,762 | INFO     | overall cleanup function is called
[2026-01-28 05:31:42] 2026-01-28 05:31:00,242 | WARNING  | process 819736 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 05:31:42] 2026-01-28 05:31:00,276 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 05:31:42] 2026-01-28 05:31:00,276 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 05:31:42] 2026-01-28 05:31:00,277 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-28 05:31:42] 2026-01-28 05:31:00,277 | WARNING  | maxPSS not found in memory monitor output
[2026-01-28 05:31:42] 2026-01-28 05:31:00,277 | INFO     | skipping file size check of payload stdout file (/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983771156/payload.stdout) since it has not been created
[2026-01-28 05:31:42] 2026-01-28 05:31:00,277 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-28 05:31:42] 2026-01-28 05:31:00,283 | INFO     | sufficient remaining disk space (27960279040 B)
[2026-01-28 05:31:42] 2026-01-28 05:31:00,283 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-28 05:31:42] 2026-01-28 05:31:00,283 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983771156/HITS.48318034._002276.pool.root.1 since it does n
[2026-01-28 05:31:42] 2026-01-28 05:31:00,333 | INFO     | number of running child processes to parent process 819736: 1
[2026-01-28 05:31:42] 2026-01-28 05:31:00,333 | INFO     | maximum number of monitored processes: 6
[2026-01-28 05:31:42] 2026-01-28 05:31:00,333 | INFO     | aborting job monitoring since job object (job id=6983771156) has expired
[2026-01-28 05:31:42] 2026-01-28 05:31:00,769 | INFO     | --- collectZombieJob: --- 10, [819736]
[2026-01-28 05:31:42] 2026-01-28 05:31:00,769 | INFO     | zombie collector waiting for pid 819736
[2026-01-28 05:31:42] 2026-01-28 05:31:00,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 05:31:42] 2026-01-28 05:31:00,770 | INFO     | collected zombie processes
[2026-01-28 05:31:42] 2026-01-28 05:31:00,770 | INFO     | will attempt to kill all subprocesses of pid=819736
[2026-01-28 05:31:42] 2026-01-28 05:31:00,826 | INFO     | process IDs to be killed: [819736] (in reverse order)
[2026-01-28 05:31:42] 2026-01-28 05:31:00,844 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 05:31:42] 2026-01-28 05:31:00,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 05:31:42] 2026-01-28 05:31:00,846 | INFO     | did not find any defunct processes belonging to 819736
[2026-01-28 05:31:42] 2026-01-28 05:31:00,847 | INFO     | did not find any defunct processes belonging to 819736
[2026-01-28 05:31:42] 2026-01-28 05:31:00,847 | INFO     | ready for new job
[2026-01-28 05:31:42] 2026-01-28 05:31:00,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 05:31:42] 2026-01-28 05:31:00,849 | INFO     | **************************************
[2026-01-28 05:31:42] 2026-01-28 05:31:00,849 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 05:31:42] 2026-01-28 05:31:00,849 | INFO     | **************************************
[2026-01-28 05:31:42] 2026-01-28 05:31:00,849 | INFO     | 
[2026-01-28 05:31:42] 2026-01-28 05:31:00,871 | INFO     | architecture information:
[2026-01-28 05:31:42] 2026-01-28 05:31:00,872 | INFO     | executing command: cat /etc/os-release
[2026-01-28 05:31:42] 2026-01-28 05:31:00,878 | INFO     | cat /etc/os-release:
[2026-01-28 05:31:42] NAME="CentOS Linux"
[2026-01-28 05:31:42] VERSION="7 (Core)"
[2026-01-28 05:31:42] ID="centos"
[2026-01-28 05:31:42] ID_LIKE="rhel fedora"
[2026-01-28 05:31:42] VERSION_ID="7"
[2026-01-28 05:31:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 05:31:42] ANSI_COLOR="0;31"
[2026-01-28 05:31:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 05:31:42] HOME_URL="https://www.centos.org/"
[2026-01-28 05:31:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 05:31:42] 
[2026-01-28 05:31:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 05:31:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 05:31:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 05:31:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 05:31:42] 
[2026-01-28 05:31:42] 2026-01-28 05:31:00,879 | INFO     | **************************************
[2026-01-28 05:31:42] 2026-01-28 05:31:01,379 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-28 05:31:42] 2026-01-28 05:31:01,386 | INFO     | sufficient remaining disk space (27961327616 B)
[2026-01-28 05:31:42] 2026-01-28 05:31:01,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | INFO     | update_server=False
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:31:42] 2026-01-28 05:31:01,387 | INFO     | aborting loop
[2026-01-28 05:31:42] 2026-01-28 05:31:01,534 | INFO     | all job control threads have been joined
[2026-01-28 05:31:42] 2026-01-28 05:31:01,891 | INFO     | all data control threads have been joined
[2026-01-28 05:31:42] 2026-01-28 05:31:01,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 05:31:42] 2026-01-28 05:31:02,391 | INFO     | [job] job monitor thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:02,391 | INFO     | [job] queue monitor thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:02,392 | INFO     | [job] retrieve thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:02,537 | INFO     | [job] control thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:02,571 | INFO     | all payload control threads have been joined
[2026-01-28 05:31:42] 2026-01-28 05:31:02,892 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:02,895 | INFO     | [data] control thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,067 | INFO     | [job] validate thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,143 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,255 | INFO     | [payload] failed_post thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,295 | INFO     | [data] copytool_in thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,307 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,575 | INFO     | [payload] control thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,749 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 05:31:42] 2026-01-28 05:31:03,978 | INFO     | [data] copytool_out thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:03,983 | INFO     | [payload] validate_post thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:07,891 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 05:31:42] 2026-01-28 05:31:30,937 | INFO     | PID=815250 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 05:31:42] 2026-01-28 05:31:30,937 | INFO     | .. there are 2 such processes running
[2026-01-28 05:31:42] 2026-01-28 05:31:30,937 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 05:31:42] 2026-01-28 05:31:30,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 05:31:42] 2026-01-28 05:31:30,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 05:31:42] 2026-01-28 05:31:35,071 | INFO     | [monitor] cgroup control has ended
[2026-01-28 05:31:42] 2026-01-28 05:31:37,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313166157632)>', '<ExcThread(monitor, started 140312219481856)>']
[2026-01-28 05:31:42] 2026-01-28 05:31:37,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 05:31:42] 2026-01-28 05:31:37,973 | INFO     | [monitor] control thread has ended
[2026-01-28 05:31:42] 2026-01-28 05:31:42,156 | INFO     | all workflow threads have been joined
[2026-01-28 05:31:42] 2026-01-28 05:31:42,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 05:31:42] 2026-01-28 05:31:42,157 | INFO     | traces error code: 0
[2026-01-28 05:31:42] 2026-01-28 05:31:42,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 05:31:42] 2026-01-28 05:31:42,213 [wrapper] ==== pilot stdout END ====
[2026-01-28 05:31:42] 2026-01-28 05:31:42,214 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 05:31:42] 2026-01-28 05:31:42,215 [wrapper] pilotpid: 815250
[2026-01-28 05:31:42] 2026-01-28 05:31:42,217 [wrapper] Pilot exit status: 0
[2026-01-28 05:31:42] 2026-01-28 05:31:42,221 [wrapper] pandaids: 6983771156
[2026-01-28 05:31:42] 2026-01-28 05:31:42,233 [wrapper] cleanup supervisor_pilot  838468 815251
[2026-01-28 05:31:42] 2026-01-28 05:31:42,235 [wrapper] Test setup, not cleaning
[2026-01-28 05:31:42] 2026-01-28 05:31:42,236 [wrapper] apfmon messages muted
[2026-01-28 05:31:42] 2026-01-28 05:31:42,237 [wrapper] ==== wrapper stdout END ====
[2026-01-28 05:31:42] 2026-01-28 05:31:42,238 [wrapper] ==== wrapper stderr END ====
[2026-01-28 05:31:42]  *** Error codes and diagnostics ***
[2026-01-28 05:31:42]     "exeErrorCode": 0,
[2026-01-28 05:31:42]     "exeErrorDiag": "",
[2026-01-28 05:31:42]     "pilotErrorCode": 0,
[2026-01-28 05:31:42]     "pilotErrorDiag": "",
[2026-01-28 05:31:42]  *** Listing of results directory ***
[2026-01-28 05:31:42] total 668344
[2026-01-28 05:31:42] -rw-r--r-- 1 boinc boinc      5111 Jan 26 01:12 queuedata.json
[2026-01-28 05:31:42] -rw-r--r-- 1 boinc boinc    584422 Jan 26 01:12 pilot3.tar.gz
[2026-01-28 05:31:42] -rwx------ 1 boinc boinc     36322 Jan 26 01:12 runpilot2-wrapper.sh
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc       100 Jan 28 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 05:31:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 02:41 run_atlas
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc       105 Jan 28 02:41 job.xml
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc 494241255 Jan 28 02:41 EVNT.48318032._000059.pool.root.1
[2026-01-28 05:31:42] drwxrwx--x 2 boinc boinc      4096 Jan 28 02:41 shared
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc    597762 Jan 28 02:41 input.tar.gz
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:41 start_atlas.sh
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc      9393 Jan 28 02:41 init_data.xml
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc         0 Jan 28 02:41 boinc_setup_complete
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc         0 Jan 28 02:41 boinc_lockfile
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc      2533 Jan 28 02:41 pandaJob.out
[2026-01-28 05:31:42] -rw------- 1 boinc boinc   1005248 Jan 28 02:41 agis_schedconf.cvmfs.json
[2026-01-28 05:31:42] -rw------- 1 boinc boinc   1516246 Jan 28 02:41 agis_ddmendpoints.agis.ALL.json
[2026-01-28 05:31:42] -rw------- 1 boinc boinc       415 Jan 28 02:41 workernode_map.json
[2026-01-28 05:31:42] drwx------ 5 boinc boinc      4096 Jan 28 02:41 pilot3
[2026-01-28 05:31:42] -rw------- 1 boinc boinc 182261694 Jan 28 05:30 HITS.48318034._002276.pool.root.1
[2026-01-28 05:31:42] -rw------- 1 boinc boinc        95 Jan 28 05:30 pilot_heartbeat.json
[2026-01-28 05:31:42] -rw------- 1 boinc boinc      1018 Jan 28 05:30 memory_monitor_summary.json
[2026-01-28 05:31:42] -rw------- 1 boinc boinc    477742 Jan 28 05:30 log.48318034._002276.job.log.tgz.1
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc       531 Jan 28 05:30 boinc_task_state.xml
[2026-01-28 05:31:42] -rw------- 1 boinc boinc      6299 Jan 28 05:30 heartbeat.json
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc        28 Jan 28 05:31 wrapper_checkpoint.txt
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc      8192 Jan 28 05:31 boinc_mmap_file
[2026-01-28 05:31:42] -rw------- 1 boinc boinc      4841 Jan 28 05:31 pilotlog.txt
[2026-01-28 05:31:42] -rw------- 1 boinc boinc   1486902 Jan 28 05:31 log.48318034._002276.job.log.1
[2026-01-28 05:31:42] -rw------- 1 boinc boinc       357 Jan 28 05:31 output.list
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc       620 Jan 28 05:31 runtime_log
[2026-01-28 05:31:42] -rw------- 1 boinc boinc   1986560 Jan 28 05:31 result.tar.gz
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc      9152 Jan 28 05:31 runtime_log.err
[2026-01-28 05:31:42] -rw------- 1 boinc boinc       652 Jan 28 05:31 KAULDmeKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWi8KDmNgeYHm.diag
[2026-01-28 05:31:42] -rw-rw-r-- 1 boinc boinc     21315 Jan 28 05:31 stderr.txt
[2026-01-28 05:31:42] HITS file was successfully produced:
[2026-01-28 05:31:42] -rw------- 1 boinc boinc 182261694 Jan 28 05:30 shared/HITS.pool.root.1
[2026-01-28 05:31:42]  *** Contents of shared directory: ***
[2026-01-28 05:31:42] total 663200
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc 494241255 Jan 28 02:41 ATLAS.root_0
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc    597762 Jan 28 02:41 input.tar.gz
[2026-01-28 05:31:42] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:41 start_atlas.sh
[2026-01-28 05:31:42] -rw------- 1 boinc boinc 182261694 Jan 28 05:30 HITS.pool.root.1
[2026-01-28 05:31:42] -rw------- 1 boinc boinc   1986560 Jan 28 05:31 result.tar.gz
05:31:43 (811208): run_atlas exited; CPU time 39101.669313
05:31:43 (811208): called boinc_finish(0)

</stderr_txt>
]]>

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