Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:30 (1245618): wrapper (7.7.26015): starting
16:35:30 (1245618): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 16:35:30] Arguments: --nthreads 3
[2026-01-26 16:35:30] Threads: 3
[2026-01-26 16:35:30] Checking for CVMFS
[2026-01-26 16:35:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:35:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:35:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:35:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:35:31] 2.9.2.0 2182370 8477 91048 155551 2 50 26413422 36864000 0 130560 0 3789844 99.987 266911 6004 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 16:35:31] CVMFS is ok
[2026-01-26 16:35:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:35:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:35:31] Further information can be found at the LHC@home message board.
[2026-01-26 16:35:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:35:31] Checking for apptainer binary...
[2026-01-26 16:35:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:35:31] Running /usr/bin/apptainer --version
[2026-01-26 16:35:31] apptainer version 1.4.1-1.1
[2026-01-26 16:35:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:35:31] atlasA303
[2026-01-26 16:35:31] apptainer works
[2026-01-26 16:35:31] Set ATHENA_PROC_NUMBER=3
[2026-01-26 16:35:31] Set ATHENA_CORE_NUMBER=3
[2026-01-26 16:35:31] Starting ATLAS job with PandaID=6983771620
[2026-01-26 16:35:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:58:53]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:58:53] 2026-01-26 16:58:18,328 | INFO     | cat /etc/os-release:
[2026-01-26 17:58:53] NAME="CentOS Linux"
[2026-01-26 17:58:53] VERSION="7 (Core)"
[2026-01-26 17:58:53] ID="centos"
[2026-01-26 17:58:53] ID_LIKE="rhel fedora"
[2026-01-26 17:58:53] VERSION_ID="7"
[2026-01-26 17:58:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:58:53] ANSI_COLOR="0;31"
[2026-01-26 17:58:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:58:53] HOME_URL="https://www.centos.org/"
[2026-01-26 17:58:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:58:53] 
[2026-01-26 17:58:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:58:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:58:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:58:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:58:53] 
[2026-01-26 17:58:53] 2026-01-26 16:58:18,328 | INFO     | **************************************
[2026-01-26 17:58:53] 2026-01-26 16:58:18,831 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 17:58:53] 2026-01-26 16:58:18,845 | INFO     | sufficient remaining disk space (375974264832 B)
[2026-01-26 17:58:53] 2026-01-26 16:58:18,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:58:53] 2026-01-26 16:58:18,845 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:58:53] 2026-01-26 16:58:18,845 | INFO     | update_server=False
[2026-01-26 17:58:53] 2026-01-26 16:58:18,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:58:53] 2026-01-26 16:58:19,274 | INFO     | all payload control threads have been joined
[2026-01-26 17:58:53] 2026-01-26 16:58:19,370 | INFO     | all data control threads have been joined
[2026-01-26 17:58:53] 2026-01-26 16:58:19,467 | INFO     | all job control threads have been joined
[2026-01-26 17:58:53] 2026-01-26 16:58:19,851 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:19,858 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:19,883 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:19,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:58:53] 2026-01-26 16:58:20,036 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:20,280 | INFO     | [payload] control thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:20,376 | INFO     | [data] control thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:20,473 | INFO     | [job] control thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:20,490 | WARNING  | process 1254190 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:58:53] 2026-01-26 16:58:20,520 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:58:53] 2026-01-26 16:58:20,520 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:58:53] 2026-01-26 16:58:20,520 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 17:58:53] 2026-01-26 16:58:20,520 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 17:58:53] 2026-01-26 16:58:20,521 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6983771620/payload.stdout) since it has not been created yet
[2026-01-26 17:58:53] 2026-01-26 16:58:20,521 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 17:58:53] 2026-01-26 16:58:20,530 | INFO     | sufficient remaining disk space (375974264832 B)
[2026-01-26 17:58:53] 2026-01-26 16:58:20,531 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 17:58:53] 2026-01-26 16:58:20,531 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6983771620/HITS.48317872._001543.pool.root.1 since it does not exist
[2026-01-26 17:58:53] 2026-01-26 16:58:20,571 | INFO     | number of running child processes to parent process 1254190: 1
[2026-01-26 17:58:53] 2026-01-26 16:58:20,572 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:58:53] 2026-01-26 16:58:20,572 | INFO     | aborting job monitoring since job object (job id=6983771620) has expired
[2026-01-26 17:58:53] 2026-01-26 16:58:20,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:58:53] 2026-01-26 16:58:20,572 | INFO     | will abort loop
[2026-01-26 17:58:53] 2026-01-26 16:58:20,602 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,058 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,271 | INFO     | [job] validate thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,277 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:58:53] 2026-01-26 16:58:21,577 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:21,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:58:53] 2026-01-26 16:58:21,894 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:22,801 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:25,308 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:58:53] 2026-01-26 16:58:46,728 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:58:53] 2026-01-26 16:58:48,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592393299776)>', '<ExcThread(monitor, started 140591904048896)>']
[2026-01-26 17:58:53] 2026-01-26 16:58:48,576 | INFO     | PID=1249681 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:58:53] 2026-01-26 16:58:48,577 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:58:53] 2026-01-26 16:58:48,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:58:53] 2026-01-26 16:58:48,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:58:53] 2026-01-26 16:58:48,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:58:53] 2026-01-26 16:58:48,577 | INFO     | [monitor] control thread has ended
[2026-01-26 17:58:53] 2026-01-26 16:58:53,038 | INFO     | all workflow threads have been joined
[2026-01-26 17:58:53] 2026-01-26 16:58:53,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:58:53] 2026-01-26 16:58:53,038 | INFO     | traces error code: 0
[2026-01-26 17:58:53] 2026-01-26 16:58:53,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:58:53] 2026-01-26 16:58:53,088 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:58:53] 2026-01-26 16:58:53,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:58:53] 2026-01-26 16:58:53,093 [wrapper] pilotpid: 1249681
[2026-01-26 17:58:53] 2026-01-26 16:58:53,095 [wrapper] Pilot exit status: 0
[2026-01-26 17:58:53] 2026-01-26 16:58:53,102 [wrapper] pandaids: 6983771620
[2026-01-26 17:58:53] 2026-01-26 16:58:53,118 [wrapper] cleanup supervisor_pilot 1276405 1249682
[2026-01-26 17:58:53] 2026-01-26 16:58:53,120 [wrapper] Test setup, not cleaning
[2026-01-26 17:58:53] 2026-01-26 16:58:53,123 [wrapper] apfmon messages muted
[2026-01-26 17:58:53] 2026-01-26 16:58:53,125 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:58:53] 2026-01-26 16:58:53,127 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:58:53]  *** Error codes and diagnostics ***
[2026-01-26 17:58:53]     "exeErrorCode": 0,
[2026-01-26 17:58:53]     "exeErrorDiag": "",
[2026-01-26 17:58:53]     "pilotErrorCode": 0,
[2026-01-26 17:58:53]     "pilotErrorDiag": "",
[2026-01-26 17:58:53]  *** Listing of results directory ***
[2026-01-26 17:58:53] total 673324
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc    621528 Jan 14 12:27 pilot3.tar.gz
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-26 17:58:53] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:58:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:35 run_atlas
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:35 job.xml
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc 500453792 Jan 26 16:35 EVNT.48317869._000031.pool.root.1
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc    634113 Jan 26 16:35 input.tar.gz
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:35 start_atlas.sh
[2026-01-26 17:58:53] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:35 shared
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:35 boinc_setup_complete
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc      6447 Jan 26 16:35 init_data.xml
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:35 boinc_lockfile
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc      2514 Jan 26 16:35 pandaJob.out
[2026-01-26 17:58:53] -rw------- 1 boinc boinc   1002189 Jan 26 16:35 agis_schedconf.cvmfs.json
[2026-01-26 17:58:53] -rw------- 1 boinc boinc   1516246 Jan 26 16:35 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:58:53] -rw------- 1 boinc boinc       426 Jan 26 16:35 workernode_map.json
[2026-01-26 17:58:53] drwx------ 5 boinc boinc      4096 Jan 26 16:35 pilot3
[2026-01-26 17:58:53] -rw------- 1 boinc boinc 182969641 Jan 26 17:57 HITS.48317872._001543.pool.root.1
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc       530 Jan 26 17:58 boinc_task_state.xml
[2026-01-26 17:58:53] -rw------- 1 boinc boinc        95 Jan 26 17:58 pilot_heartbeat.json
[2026-01-26 17:58:53] -rw------- 1 boinc boinc      1014 Jan 26 17:58 memory_monitor_summary.json
[2026-01-26 17:58:53] -rw------- 1 boinc boinc    276102 Jan 26 17:58 log.48317872._001543.job.log.tgz.1
[2026-01-26 17:58:53] -rw------- 1 boinc boinc      6302 Jan 26 17:58 heartbeat.json
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc      8192 Jan 26 17:58 boinc_mmap_file
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc        27 Jan 26 17:58 wrapper_checkpoint.txt
[2026-01-26 17:58:53] -rw------- 1 boinc boinc      6249 Jan 26 17:58 pilotlog.txt
[2026-01-26 17:58:53] -rw------- 1 boinc boinc    754294 Jan 26 17:58 log.48317872._001543.job.log.1
[2026-01-26 17:58:53] -rw------- 1 boinc boinc       357 Jan 26 17:58 output.list
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc       620 Jan 26 17:58 runtime_log
[2026-01-26 17:58:53] -rw------- 1 boinc boinc   1044480 Jan 26 17:58 result.tar.gz
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc      8911 Jan 26 17:58 runtime_log.err
[2026-01-26 17:58:53] -rw------- 1 boinc boinc       660 Jan 26 17:58 eK3MDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnh8KDmMihCSo.diag
[2026-01-26 17:58:53] -rw-r--r-- 1 boinc boinc     10576 Jan 26 17:58 stderr.txt
[2026-01-26 17:58:53] HITS file was successfully produced:
[2026-01-26 17:58:53] -rw------- 1 boinc boinc 182969641 Jan 26 17:57 shared/HITS.pool.root.1
[2026-01-26 17:58:53]  *** Contents of shared directory: ***
[2026-01-26 17:58:53] total 669076
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc 500453792 Jan 26 16:35 ATLAS.root_0
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc    634113 Jan 26 16:35 input.tar.gz
[2026-01-26 17:58:53] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:35 start_atlas.sh
[2026-01-26 17:58:53] -rw------- 1 boinc boinc 182969641 Jan 26 17:57 HITS.pool.root.1
[2026-01-26 17:58:53] -rw------- 1 boinc boinc   1044480 Jan 26 17:58 result.tar.gz
17:58:54 (1245618): run_atlas exited; CPU time 14227.835887
17:58:54 (1245618): called boinc_finish(0)

</stderr_txt>
]]>

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