Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:56 (15384): wrapper (7.7.26015): starting
00:03:56 (15384): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 00:03:56] Arguments: --nthreads 9
[2026-01-26 00:03:56] Threads: 9
[2026-01-26 00:03:56] Checking for CVMFS
[2026-01-26 00:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:03:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:03:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:04:01] 2.13.3.0 13009 54113 399660 155532 0 310 23177426 32935937 24076 16776704 0 67615373 99.587 75985027 13789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 00:04:01] CVMFS is ok
[2026-01-26 00:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:04:01] Further information can be found at the LHC@home message board.
[2026-01-26 00:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:04:01] Checking for apptainer binary...
[2026-01-26 00:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:04:01] Running /usr/bin/apptainer --version
[2026-01-26 00:04:01] apptainer version 1.4.5-2.el9
[2026-01-26 00:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:04:03] c6-12-25-2.aglt2.org
[2026-01-26 00:04:03] apptainer works
[2026-01-26 00:04:03] Set ATHENA_PROC_NUMBER=9
[2026-01-26 00:04:03] Set ATHENA_CORE_NUMBER=9
[2026-01-26 00:04:03] Starting ATLAS job with PandaID=6983770951
[2026-01-26 00:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 16:13:11]  *** The last 200 lines of the pilot log: ***
[2026-01-26 16:13:11] 2026-01-26 21:11:59,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 16:13:11] 2026-01-26 21:11:59,228 | INFO     | job 6983770951 has state=finished
[2026-01-26 16:13:11] 2026-01-26 21:11:59,229 | INFO     | preparing for final server update for job 6983770951 in state='finished'
[2026-01-26 16:13:11] 2026-01-26 21:11:59,230 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6983770951/jobReport.json
[2026-01-26 16:13:11] 2026-01-26 21:11:59,264 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-01-26 16:13:11] 2026-01-26 21:11:59,296 | INFO     | this job has now completed (state=finished)
[2026-01-26 16:13:11] 2026-01-26 21:11:59,296 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 16:13:11] 2026-01-26 21:11:59,297 | INFO     | log transfer has been attempted: DONE
[2026-01-26 16:13:11] 2026-01-26 21:11:59,297 | INFO     | job 6983770951 has finished - writing final server update
[2026-01-26 16:13:11] 2026-01-26 21:11:59,298 | INFO     | total number of processed events: 400 (read)
[2026-01-26 16:13:11] 2026-01-26 21:11:59,616 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983770951/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 16:13:11] 2026-01-26 21:11:59,640 | INFO     | extracted standard info from prmon json
[2026-01-26 16:13:11] 2026-01-26 21:11:59,641 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 16:13:11] 2026-01-26 21:11:59,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 16:13:11] 2026-01-26 21:11:59,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 16:13:11] 2026-01-26 21:11:59,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 16:13:11] 2026-01-26 21:12:00,051 | INFO     | fitting pss+swap vs Time
[2026-01-26 16:13:11] 2026-01-26 21:12:00,077 | INFO     | sum of square deviations: 263351090111.00717
[2026-01-26 16:13:11] 2026-01-26 21:12:00,435 | INFO     | sum of deviations: 1492960754996.6885
[2026-01-26 16:13:11] 2026-01-26 21:12:00,436 | INFO     | mean x: 1769433035.091869
[2026-01-26 16:13:11] 2026-01-26 21:12:00,436 | INFO     | mean y: 2468415.842661035
[2026-01-26 16:13:11] 2026-01-26 21:12:00,436 | INFO     | intersect: -10028604851.685177
[2026-01-26 16:13:11] 2026-01-26 21:12:00,452 | INFO     | chi2: 16.8529467197403
[2026-01-26 16:13:11] 2026-01-26 21:12:00,468 | INFO     | sum of square deviations: 259202339883.7168
[2026-01-26 16:13:11] 2026-01-26 21:12:00,770 | INFO     | sum of deviations: 1800377260960.6833
[2026-01-26 16:13:11] 2026-01-26 21:12:00,771 | INFO     | mean x: 1769432882.6019108
[2026-01-26 16:13:11] 2026-01-26 21:12:00,771 | INFO     | mean y: 2479715.7324840766
[2026-01-26 16:13:11] 2026-01-26 21:12:00,772 | INFO     | intersect: -12287713065.944323
[2026-01-26 16:13:11] 2026-01-26 21:12:00,775 | INFO     | chi2: 13.104854188128504
[2026-01-26 16:13:11] 2026-01-26 21:12:00,776 | INFO     | current chi2=13.104854188128504 (change=22.239983273794813 %)
[2026-01-26 16:13:11] 2026-01-26 21:12:00,776 | INFO     | right removable region: 941
[2026-01-26 16:13:11] 2026-01-26 21:12:00,779 | INFO     | sum of square deviations: 259201247129.7164
[2026-01-26 16:13:11] 2026-01-26 21:12:00,946 | INFO     | sum of deviations: 1171198941255.3586
[2026-01-26 16:13:11] 2026-01-26 21:12:00,946 | INFO     | mean x: 1769433187.6019108
[2026-01-26 16:13:11] 2026-01-26 21:12:00,947 | INFO     | mean y: 2480238.246284501
[2026-01-26 16:13:11] 2026-01-26 21:12:00,947 | INFO     | intersect: -7992690691.252937
[2026-01-26 16:13:11] 2026-01-26 21:12:00,968 | INFO     | chi2: 12.579875710007657
[2026-01-26 16:13:11] 2026-01-26 21:12:00,969 | INFO     | current chi2=12.579875710007657 (change=25.355037791269353 %)
[2026-01-26 16:13:11] 2026-01-26 21:12:00,986 | INFO     | sum of square deviations: 255095334097.6781
[2026-01-26 16:13:11] 2026-01-26 21:12:01,114 | INFO     | sum of deviations: 909013996194.9949
[2026-01-26 16:13:11] 2026-01-26 21:12:01,114 | INFO     | mean x: 1769433340.1099253
[2026-01-26 16:13:11] 2026-01-26 21:12:01,115 | INFO     | mean y: 2489975.4951974386
[2026-01-26 16:13:11] 2026-01-26 21:12:01,115 | INFO     | intersect: -6302759303.890273
[2026-01-26 16:13:11] 2026-01-26 21:12:01,118 | INFO     | chi2: 9.859233564091369
[2026-01-26 16:13:11] 2026-01-26 21:12:01,119 | INFO     | current chi2=9.859233564091369 (change=21.626939793625613 %)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,119 | INFO     | left removable region: 20
[2026-01-26 16:13:11] 2026-01-26 21:12:01,122 | INFO     | sum of square deviations: 242249321110.2107
[2026-01-26 16:13:11] 2026-01-26 21:12:01,159 | INFO     | time since job start (57895s) is within the limit (349056.0s)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,170 | INFO     | sum of deviations: 871589327650.3336
[2026-01-26 16:13:11] 2026-01-26 21:12:01,171 | INFO     | mean x: 1769433462.1389794
[2026-01-26 16:13:11] 2026-01-26 21:12:01,171 | INFO     | mean y: 2519416.6536373505
[2026-01-26 16:13:11] 2026-01-26 21:12:01,172 | INFO     | intersect: -6363728854.011635
[2026-01-26 16:13:11] 2026-01-26 21:12:01,175 | INFO     | chi2: 2.040296450322794
[2026-01-26 16:13:11] 2026-01-26 21:12:01,175 | INFO     | current memory leak: 3.60 B/s (using 921 data points, chi2=2.04)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,183 | INFO     | could have reported an average CPU frequency of 999 MHz (35 samples)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,183 | INFO     | ..............................
[2026-01-26 16:13:11] 2026-01-26 21:12:01,184 | INFO     | . Timing measurements:
[2026-01-26 16:13:11] 2026-01-26 21:12:01,184 | INFO     | . get job = 1 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,184 | INFO     | . initial setup = 71 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,184 | INFO     | . payload setup = 80 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,185 | INFO     | . stage-in = 1 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,185 | INFO     | . payload execution = 57770 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,185 | INFO     | . stage-out = 8 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,185 | INFO     | . log creation = 1 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,185 | INFO     | ..............................
[2026-01-26 16:13:11] 2026-01-26 21:12:01,494 | INFO     | 
[2026-01-26 16:13:11] 2026-01-26 21:12:01,496 | INFO     | job summary report
[2026-01-26 16:13:11] 2026-01-26 21:12:01,496 | INFO     | --------------------------------------------------
[2026-01-26 16:13:11] 2026-01-26 21:12:01,496 | INFO     | PanDA job id: 6983770951
[2026-01-26 16:13:11] 2026-01-26 21:12:01,497 | INFO     | task id: 48318034
[2026-01-26 16:13:11] 2026-01-26 21:12:01,497 | INFO     | errors: (none)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,497 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 16:13:11] 2026-01-26 21:12:01,497 | INFO     | pilot state: finished 
[2026-01-26 16:13:11] 2026-01-26 21:12:01,498 | INFO     | transexitcode: 0
[2026-01-26 16:13:11] 2026-01-26 21:12:01,498 | INFO     | exeerrorcode: 0
[2026-01-26 16:13:11] 2026-01-26 21:12:01,498 | INFO     | exeerrordiag: 
[2026-01-26 16:13:11] 2026-01-26 21:12:01,498 | INFO     | exitcode: 0
[2026-01-26 16:13:11] 2026-01-26 21:12:01,498 | INFO     | exitmsg: OK
[2026-01-26 16:13:11] 2026-01-26 21:12:01,499 | INFO     | cpuconsumptiontime: 113673 s
[2026-01-26 16:13:11] 2026-01-26 21:12:01,499 | INFO     | nevents: 400
[2026-01-26 16:13:11] 2026-01-26 21:12:01,499 | INFO     | neventsw: 0
[2026-01-26 16:13:11] 2026-01-26 21:12:01,522 | INFO     | pid: 65738
[2026-01-26 16:13:11] 2026-01-26 21:12:01,522 | INFO     | pgrp: 65738
[2026-01-26 16:13:11] 2026-01-26 21:12:01,522 | INFO     | corecount: 9
[2026-01-26 16:13:11] 2026-01-26 21:12:01,522 | INFO     | event service: False
[2026-01-26 16:13:11] 2026-01-26 21:12:01,523 | INFO     | sizes: {0: 2283109, 2: 2283794, 3: 2283822, 5: 2283822, 6: 2283822, 7: 2284283, 9: 2284439, 22: 2284467, 57854: 2331554, 57855: 2331553, 57865: 2340607, 57869: 234
[2026-01-26 16:13:11] 2026-01-26 21:12:01,523 | INFO     | --------------------------------------------------
[2026-01-26 16:13:11] 2026-01-26 21:12:01,523 | INFO     | 
[2026-01-26 16:13:11] 2026-01-26 21:12:01,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 16:13:11] 2026-01-26 21:12:01,695 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,696 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,696 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,696 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,724 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,724 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 16:13:11] 2026-01-26 21:12:01,725 | INFO     | job 6983770951 has completed (purged errors)
[2026-01-26 16:13:11] 2026-01-26 21:12:01,725 | INFO     | overall cleanup function is called
[2026-01-26 16:13:11] 2026-01-26 21:12:02,775 | INFO     | --- collectZombieJob: --- 10, [65738]
[2026-01-26 16:13:11] 2026-01-26 21:12:02,776 | INFO     | zombie collector waiting for pid 65738
[2026-01-26 16:13:11] 2026-01-26 21:12:02,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 16:13:11] 2026-01-26 21:12:02,776 | INFO     | collected zombie processes
[2026-01-26 16:13:11] 2026-01-26 21:12:02,777 | INFO     | will attempt to kill all subprocesses of pid=65738
[2026-01-26 16:13:11] 2026-01-26 21:12:04,356 | INFO     | process IDs to be killed: [65738] (in reverse order)
[2026-01-26 16:13:11] 2026-01-26 21:12:04,674 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 16:13:11] 2026-01-26 21:12:04,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 16:13:11] 2026-01-26 21:12:04,769 | INFO     | did not find any defunct processes belonging to 65738
[2026-01-26 16:13:11] 2026-01-26 21:12:04,945 | INFO     | did not find any defunct processes belonging to 65738
[2026-01-26 16:13:11] 2026-01-26 21:12:04,946 | INFO     | ready for new job
[2026-01-26 16:13:11] 2026-01-26 21:12:04,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 16:13:11] 2026-01-26 21:12:05,005 | INFO     | **************************************
[2026-01-26 16:13:11] 2026-01-26 21:12:05,006 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 16:13:11] 2026-01-26 21:12:05,006 | INFO     | **************************************
[2026-01-26 16:13:11] 2026-01-26 21:12:05,006 | INFO     | 
[2026-01-26 16:13:11] 2026-01-26 21:12:05,050 | INFO     | architecture information:
[2026-01-26 16:13:11] 2026-01-26 21:12:05,055 | INFO     | executing command: cat /etc/os-release
[2026-01-26 16:13:11] 2026-01-26 21:12:05,242 | INFO     | cat /etc/os-release:
[2026-01-26 16:13:11] NAME="CentOS Linux"
[2026-01-26 16:13:11] VERSION="7 (Core)"
[2026-01-26 16:13:11] ID="centos"
[2026-01-26 16:13:11] ID_LIKE="rhel fedora"
[2026-01-26 16:13:11] VERSION_ID="7"
[2026-01-26 16:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 16:13:11] ANSI_COLOR="0;31"
[2026-01-26 16:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 16:13:11] HOME_URL="https://www.centos.org/"
[2026-01-26 16:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 16:13:11] 
[2026-01-26 16:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 16:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 16:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 16:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 16:13:11] 
[2026-01-26 16:13:11] 2026-01-26 21:12:05,243 | INFO     | **************************************
[2026-01-26 16:13:11] 2026-01-26 21:12:05,748 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 16:13:11] 2026-01-26 21:12:05,833 | INFO     | sufficient remaining disk space (90779418624 B)
[2026-01-26 16:13:11] 2026-01-26 21:12:05,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 16:13:11] 2026-01-26 21:12:05,835 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 16:13:11] 2026-01-26 21:12:05,835 | INFO     | update_server=False
[2026-01-26 16:13:11] 2026-01-26 21:12:05,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 16:13:11] 2026-01-26 21:12:05,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:13:11] 2026-01-26 21:12:05,841 | INFO     | aborting loop
[2026-01-26 16:13:11] 2026-01-26 21:12:05,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 16:13:11] 2026-01-26 21:12:05,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 16:13:11] 2026-01-26 21:12:05,931 | INFO     | all job control threads have been joined
[2026-01-26 16:13:11] 2026-01-26 21:12:06,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:13:11] 2026-01-26 21:12:06,601 | INFO     | all data control threads have been joined
[2026-01-26 16:13:11] 2026-01-26 21:12:06,842 | INFO     | [job] retrieve thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:06,847 | INFO     | [job] job monitor thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:06,938 | INFO     | [job] control thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,108 | INFO     | all payload control threads have been joined
[2026-01-26 16:13:11] 2026-01-26 21:12:07,153 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,189 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,344 | INFO     | [job] validate thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,534 | INFO     | [job] queue monitor thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,609 | INFO     | [data] control thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,799 | INFO     | [payload] validate_post thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,858 | INFO     | [data] copytool_out thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,896 | INFO     | [payload] failed_post thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,899 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:07,908 | INFO     | [data] copytool_in thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:08,114 | INFO     | [payload] control thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:09,864 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 16:13:11] 2026-01-26 21:12:41,744 | INFO     | PID=34191 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 16:13:11] 2026-01-26 21:12:41,744 | INFO     | .. there are 22 such processes running
[2026-01-26 16:13:11] 2026-01-26 21:12:41,746 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 16:13:11] 2026-01-26 21:12:41,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 16:13:11] 2026-01-26 21:12:41,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 16:13:11] 2026-01-26 21:13:03,400 | INFO     | [monitor] cgroup control has ended
[2026-01-26 16:13:11] 2026-01-26 21:13:05,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515224491840)>', '<ExcThread(monitor, started 140514871465728)>']
[2026-01-26 16:13:11] 2026-01-26 21:13:06,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 16:13:11] 2026-01-26 21:13:06,032 | INFO     | [monitor] control thread has ended
[2026-01-26 16:13:11] 2026-01-26 21:13:10,345 | INFO     | all workflow threads have been joined
[2026-01-26 16:13:11] 2026-01-26 21:13:10,346 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 16:13:11] 2026-01-26 21:13:10,346 | INFO     | traces error code: 0
[2026-01-26 16:13:11] 2026-01-26 21:13:10,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 16:13:11] 2026-01-26 21:13:11,117 [wrapper] ==== pilot stdout END ====
[2026-01-26 16:13:11] 2026-01-26 21:13:11,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 16:13:11] 2026-01-26 21:13:11,130 [wrapper] pilotpid: 34191
[2026-01-26 16:13:11] 2026-01-26 21:13:11,136 [wrapper] Pilot exit status: 0
[2026-01-26 16:13:11] 2026-01-26 21:13:11,209 [wrapper] pandaids: 6983770951
[2026-01-26 16:13:11] 2026-01-26 21:13:11,415 [wrapper] cleanup supervisor_pilot 2244308 34192
[2026-01-26 16:13:11] 2026-01-26 21:13:11,425 [wrapper] Test setup, not cleaning
[2026-01-26 16:13:11] 2026-01-26 21:13:11,431 [wrapper] apfmon messages muted
[2026-01-26 16:13:11] 2026-01-26 21:13:11,437 [wrapper] ==== wrapper stdout END ====
[2026-01-26 16:13:11] 2026-01-26 21:13:11,444 [wrapper] ==== wrapper stderr END ====
[2026-01-26 16:13:11]  *** Error codes and diagnostics ***
[2026-01-26 16:13:11]     "exeErrorCode": 0,
[2026-01-26 16:13:11]     "exeErrorDiag": "",
[2026-01-26 16:13:11]     "pilotErrorCode": 0,
[2026-01-26 16:13:11]     "pilotErrorDiag": "",
[2026-01-26 16:13:11]  *** Listing of results directory ***
[2026-01-26 16:13:11] total 676144
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 16:13:11] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 16:13:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:03 run_atlas
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:03 job.xml
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas 493750168 Jan 26 00:03 EVNT.48318032._000051.pool.root.1
[2026-01-26 16:13:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:03 shared
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 00:03 input.tar.gz
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:03 boinc_lockfile
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas      2532 Jan 26 00:04 pandaJob.out
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas        57 Jan 26 00:04 setup.sh.local
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas       443 Jan 26 00:06 workernode_map.json
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas   1004246 Jan 26 00:07 agis_schedconf.cvmfs.json
[2026-01-26 16:13:11] drwx------. 5 boincer umatlas      4096 Jan 26 00:07 pilot3
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas 183341455 Jan 26 16:05 HITS.48318034._002071.pool.root.1
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas       532 Jan 26 16:05 boinc_task_state.xml
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas      1040 Jan 26 16:11 memory_monitor_summary.json
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas   1516246 Jan 26 16:11 agis_ddmendpoints.agis.ALL.json
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas    856027 Jan 26 16:11 log.48318034._002071.job.log.tgz.1
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas      6399 Jan 26 16:12 heartbeat.json
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas      6859 Jan 26 16:12 init_data.xml
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas        95 Jan 26 16:12 pilot_heartbeat.json
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas        29 Jan 26 16:13 wrapper_checkpoint.txt
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 16:13 boinc_mmap_file
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas      4819 Jan 26 16:13 pilotlog.txt
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas   4808962 Jan 26 16:13 log.48318034._002071.job.log.1
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas       357 Jan 26 16:13 output.list
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas       620 Jan 26 16:13 runtime_log
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas   5683200 Jan 26 16:13 result.tar.gz
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas       662 Jan 26 16:13 U4FMDmTKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmy81KDm5RkB0m.diag
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas      9352 Jan 26 16:13 runtime_log.err
[2026-01-26 16:13:11] -rw-r--r--. 1 boincer umatlas     21383 Jan 26 16:13 stderr.txt
[2026-01-26 16:13:11] HITS file was successfully produced:
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas 183341455 Jan 26 16:05 shared/HITS.pool.root.1
[2026-01-26 16:13:11]  *** Contents of shared directory: ***
[2026-01-26 16:13:11] total 667388
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas 493750168 Jan 26 00:03 ATLAS.root_0
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 00:03 input.tar.gz
[2026-01-26 16:13:11] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas 183341455 Jan 26 16:05 HITS.pool.root.1
[2026-01-26 16:13:11] -rw-------. 1 boincer umatlas   5683200 Jan 26 16:13 result.tar.gz
16:13:14 (15384): run_atlas exited; CPU time 118253.319633
16:13:14 (15384): called boinc_finish(0)

</stderr_txt>
]]>

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