Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:41 (1268597): wrapper (7.7.26015): starting
00:03:41 (1268597): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 00:03:41] Arguments: --nthreads 12
[2026-01-26 00:03:41] Threads: 12
[2026-01-26 00:03:41] Checking for CVMFS
[2026-01-26 00:03:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:03:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:03:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:03:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:03:44] 2.13.3.0 1019478 40965 147920 155532 1 25 30113525 39288833 7809 16776704 0 23240699 99.588 29374457 40514 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 00:03:44] CVMFS is ok
[2026-01-26 00:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:03:45] Further information can be found at the LHC@home message board.
[2026-01-26 00:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:03:45] Checking for apptainer binary...
[2026-01-26 00:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:03:45] Running /usr/bin/apptainer --version
[2026-01-26 00:03:45] apptainer version 1.4.5-2.el9
[2026-01-26 00:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:03:45] c-210-25.aglt2.org
[2026-01-26 00:03:45] apptainer works
[2026-01-26 00:03:46] Set ATHENA_PROC_NUMBER=12
[2026-01-26 00:03:46] Set ATHENA_CORE_NUMBER=12
[2026-01-26 00:03:46] Starting ATLAS job with PandaID=6983771597
[2026-01-26 00:03:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 10:12:25]  *** The last 200 lines of the pilot log: ***
[2026-01-26 10:12:25] 2026-01-26 15:11:15,198 | INFO     | job 6983771597 has state=finished
[2026-01-26 10:12:25] 2026-01-26 15:11:15,198 | INFO     | preparing for final server update for job 6983771597 in state='finished'
[2026-01-26 10:12:25] 2026-01-26 15:11:15,198 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6983771597/jobReport.json
[2026-01-26 10:12:25] 2026-01-26 15:11:15,201 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-01-26 10:12:25] 2026-01-26 15:11:15,201 | INFO     | this job has now completed (state=finished)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,201 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,260 | INFO     | log transfer has been attempted: DONE
[2026-01-26 10:12:25] 2026-01-26 15:11:15,260 | INFO     | job 6983771597 has finished - writing final server update
[2026-01-26 10:12:25] 2026-01-26 15:11:15,260 | INFO     | total number of processed events: 400 (read)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,385 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983771597/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,386 | INFO     | extracted standard info from prmon json
[2026-01-26 10:12:25] 2026-01-26 15:11:15,386 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 10:12:25] 2026-01-26 15:11:15,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 10:12:25] 2026-01-26 15:11:15,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 10:12:25] 2026-01-26 15:11:15,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 10:12:25] 2026-01-26 15:11:15,417 | INFO     | fitting pss+swap vs Time
[2026-01-26 10:12:25] 2026-01-26 15:11:15,423 | INFO     | sum of square deviations: 64991276930.02884
[2026-01-26 10:12:25] 2026-01-26 15:11:15,440 | INFO     | sum of deviations: 489999874253.78766
[2026-01-26 10:12:25] 2026-01-26 15:11:15,441 | INFO     | mean x: 1769422148.8771043
[2026-01-26 10:12:25] 2026-01-26 15:11:15,441 | INFO     | mean y: 2615854.9696969697
[2026-01-26 10:12:25] 2026-01-26 15:11:15,441 | INFO     | intersect: -13337891847.088514
[2026-01-26 10:12:25] 2026-01-26 15:11:15,446 | INFO     | chi2: 6.595233273206191
[2026-01-26 10:12:25] 2026-01-26 15:11:15,447 | INFO     | sum of square deviations: 63364211558.18663
[2026-01-26 10:12:25] 2026-01-26 15:11:15,465 | INFO     | sum of deviations: 566286005483.314
[2026-01-26 10:12:25] 2026-01-26 15:11:15,465 | INFO     | mean x: 1769421996.3904924
[2026-01-26 10:12:25] 2026-01-26 15:11:15,465 | INFO     | mean y: 2622966.0203735144
[2026-01-26 10:12:25] 2026-01-26 15:11:15,465 | INFO     | intersect: -15810702722.25334
[2026-01-26 10:12:25] 2026-01-26 15:11:15,470 | INFO     | chi2: 5.179316411077736
[2026-01-26 10:12:25] 2026-01-26 15:11:15,470 | INFO     | current chi2=5.179316411077736 (change=21.468791223515353 %)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,470 | INFO     | right removable region: 588
[2026-01-26 10:12:25] 2026-01-26 15:11:15,471 | INFO     | sum of square deviations: 63363567030.61806
[2026-01-26 10:12:25] 2026-01-26 15:11:15,489 | INFO     | sum of deviations: 295906001748.0592
[2026-01-26 10:12:25] 2026-01-26 15:11:15,489 | INFO     | mean x: 1769422301.393888
[2026-01-26 10:12:25] 2026-01-26 15:11:15,489 | INFO     | mean y: 2634028.960950764
[2026-01-26 10:12:25] 2026-01-26 15:11:15,489 | INFO     | intersect: -8260516281.947416
[2026-01-26 10:12:25] 2026-01-26 15:11:15,498 | INFO     | chi2: 3.103232272940334
[2026-01-26 10:12:25] 2026-01-26 15:11:15,498 | INFO     | current chi2=3.103232272940334 (change=52.94734629709714 %)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,499 | INFO     | sum of square deviations: 61763468338.23971
[2026-01-26 10:12:25] 2026-01-26 15:11:15,531 | INFO     | sum of deviations: 205544020824.28067
[2026-01-26 10:12:25] 2026-01-26 15:11:15,531 | INFO     | mean x: 1769422453.9006848
[2026-01-26 10:12:25] 2026-01-26 15:11:15,531 | INFO     | mean y: 2642630.2979452056
[2026-01-26 10:12:25] 2026-01-26 15:11:15,531 | INFO     | intersect: -5885857732.404932
[2026-01-26 10:12:25] 2026-01-26 15:11:15,541 | INFO     | chi2: 2.352111158031649
[2026-01-26 10:12:25] 2026-01-26 15:11:15,541 | INFO     | current chi2=2.352111158031649 (change=24.204476134717197 %)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,542 | INFO     | left removable region: 20
[2026-01-26 10:12:25] 2026-01-26 15:11:15,542 | INFO     | sum of square deviations: 56824731624.41574
[2026-01-26 10:12:25] 2026-01-26 15:11:15,567 | INFO     | sum of deviations: 162395767869.98605
[2026-01-26 10:12:25] 2026-01-26 15:11:15,568 | INFO     | mean x: 1769422575.9471831
[2026-01-26 10:12:25] 2026-01-26 15:11:15,568 | INFO     | mean y: 2661943.3661971833
[2026-01-26 10:12:25] 2026-01-26 15:11:15,568 | INFO     | intersect: -5054057722.406372
[2026-01-26 10:12:25] 2026-01-26 15:11:15,575 | INFO     | chi2: 0.286704210626683
[2026-01-26 10:12:25] 2026-01-26 15:11:15,575 | INFO     | current memory leak: 2.86 B/s (using 568 data points, chi2=0.29)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,583 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2026-01-26 10:12:25] 2026-01-26 15:11:15,583 | INFO     | ..............................
[2026-01-26 10:12:25] 2026-01-26 15:11:15,583 | INFO     | . Timing measurements:
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . get job = 0 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . initial setup = 46 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . payload setup = 53 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . stage-in = 0 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . payload execution = 36244 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,584 | INFO     | . stage-out = 5 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,585 | INFO     | . log creation = 1 s
[2026-01-26 10:12:25] 2026-01-26 15:11:15,585 | INFO     | ..............................
[2026-01-26 10:12:25] 2026-01-26 15:11:16,308 | INFO     | 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,308 | INFO     | job summary report
[2026-01-26 10:12:25] 2026-01-26 15:11:16,308 | INFO     | --------------------------------------------------
[2026-01-26 10:12:25] 2026-01-26 15:11:16,308 | INFO     | PanDA job id: 6983771597
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | task id: 48317872
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | errors: (none)
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | pilot state: finished 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | transexitcode: 0
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | exeerrorcode: 0
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | exeerrordiag: 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | exitcode: 0
[2026-01-26 10:12:25] 2026-01-26 15:11:16,309 | INFO     | exitmsg: OK
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | cpuconsumptiontime: 49470 s
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | nevents: 400
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | neventsw: 0
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | pid: 1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | pgrp: 1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | corecount: 12
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | event service: False
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | sizes: {0: 2283797, 1: 2284230, 2: 2284286, 3: 2284286, 36302: 2324720, 36303: 2324719, 36308: 2333901, 36309: 2333957, 36313: 2334151}
[2026-01-26 10:12:25] 2026-01-26 15:11:16,310 | INFO     | --------------------------------------------------
[2026-01-26 10:12:25] 2026-01-26 15:11:16,311 | INFO     | 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 10:12:25] 2026-01-26 15:11:16,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 10:12:25] 2026-01-26 15:11:16,538 | INFO     | job 6983771597 has completed (purged errors)
[2026-01-26 10:12:25] 2026-01-26 15:11:16,539 | INFO     | overall cleanup function is called
[2026-01-26 10:12:25] 2026-01-26 15:11:16,762 | INFO     | PID=1276224 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 10:12:25] 2026-01-26 15:11:16,767 | INFO     | .. there are 8 such processes running
[2026-01-26 10:12:25] 2026-01-26 15:11:17,569 | INFO     | --- collectZombieJob: --- 10, [1286946]
[2026-01-26 10:12:25] 2026-01-26 15:11:17,569 | INFO     | zombie collector waiting for pid 1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:17,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 10:12:25] 2026-01-26 15:11:17,569 | INFO     | collected zombie processes
[2026-01-26 10:12:25] 2026-01-26 15:11:17,569 | INFO     | will attempt to kill all subprocesses of pid=1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:18,443 | INFO     | process IDs to be killed: [1286946] (in reverse order)
[2026-01-26 10:12:25] 2026-01-26 15:11:18,681 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 10:12:25] 2026-01-26 15:11:18,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 10:12:25] 2026-01-26 15:11:18,705 | INFO     | did not find any defunct processes belonging to 1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:18,729 | INFO     | did not find any defunct processes belonging to 1286946
[2026-01-26 10:12:25] 2026-01-26 15:11:18,730 | INFO     | ready for new job
[2026-01-26 10:12:25] 2026-01-26 15:11:18,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 10:12:25] 2026-01-26 15:11:18,734 | INFO     | **************************************
[2026-01-26 10:12:25] 2026-01-26 15:11:18,734 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 10:12:25] 2026-01-26 15:11:18,734 | INFO     | **************************************
[2026-01-26 10:12:25] 2026-01-26 15:11:18,734 | INFO     | 
[2026-01-26 10:12:25] 2026-01-26 15:11:18,787 | INFO     | architecture information:
[2026-01-26 10:12:25] 2026-01-26 15:11:18,814 | INFO     | executing command: cat /etc/os-release
[2026-01-26 10:12:25] 2026-01-26 15:11:18,941 | INFO     | cat /etc/os-release:
[2026-01-26 10:12:25] NAME="CentOS Linux"
[2026-01-26 10:12:25] VERSION="7 (Core)"
[2026-01-26 10:12:25] ID="centos"
[2026-01-26 10:12:25] ID_LIKE="rhel fedora"
[2026-01-26 10:12:25] VERSION_ID="7"
[2026-01-26 10:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 10:12:25] ANSI_COLOR="0;31"
[2026-01-26 10:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 10:12:25] HOME_URL="https://www.centos.org/"
[2026-01-26 10:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 10:12:25] 
[2026-01-26 10:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 10:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 10:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 10:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 10:12:25] 
[2026-01-26 10:12:25] 2026-01-26 15:11:18,941 | INFO     | **************************************
[2026-01-26 10:12:25] 2026-01-26 15:11:19,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 10:12:25] 2026-01-26 15:11:19,593 | INFO     | sufficient remaining disk space (50882150400 B)
[2026-01-26 10:12:25] 2026-01-26 15:11:19,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 10:12:25] 2026-01-26 15:11:19,594 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 10:12:25] 2026-01-26 15:11:19,594 | INFO     | update_server=False
[2026-01-26 10:12:25] 2026-01-26 15:11:19,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 10:12:25] 2026-01-26 15:11:19,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:12:25] 2026-01-26 15:11:19,793 | INFO     | aborting loop
[2026-01-26 10:12:25] 2026-01-26 15:11:19,809 | INFO     | all data control threads have been joined
[2026-01-26 10:12:25] 2026-01-26 15:11:20,254 | INFO     | all job control threads have been joined
[2026-01-26 10:12:25] 2026-01-26 15:11:20,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 10:12:25] 2026-01-26 15:11:20,600 | INFO     | [job] retrieve thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:20,661 | INFO     | all payload control threads have been joined
[2026-01-26 10:12:25] 2026-01-26 15:11:20,799 | INFO     | [job] job monitor thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:20,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:20,826 | INFO     | [data] copytool_in thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:20,826 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:20,827 | INFO     | [data] control thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,260 | INFO     | [job] control thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:12:25] 2026-01-26 15:11:21,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,416 | INFO     | [payload] validate_post thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,556 | INFO     | [job] validate thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,669 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:21,687 | INFO     | [payload] control thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:22,014 | INFO     | [payload] failed_post thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:22,332 | INFO     | [job] queue monitor thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:22,452 | INFO     | [data] copytool_out thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:22,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 10:12:25] 2026-01-26 15:11:27,050 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 10:12:25] 2026-01-26 15:11:51,173 | INFO     | PID=1276224 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 10:12:25] 2026-01-26 15:11:51,173 | INFO     | .. there are 8 such processes running
[2026-01-26 10:12:25] 2026-01-26 15:11:51,173 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 10:12:25] 2026-01-26 15:11:51,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 10:12:25] 2026-01-26 15:11:51,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 10:12:25] 2026-01-26 15:12:15,419 | INFO     | [monitor] cgroup control has ended
[2026-01-26 10:12:25] 2026-01-26 15:12:16,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835752003392)>', '<ExcThread(monitor, started 139835385825024)>']
[2026-01-26 10:12:25] 2026-01-26 15:12:16,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 10:12:25] 2026-01-26 15:12:16,496 | INFO     | [monitor] control thread has ended
[2026-01-26 10:12:25] 2026-01-26 15:12:21,456 | INFO     | all workflow threads have been joined
[2026-01-26 10:12:25] 2026-01-26 15:12:21,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 10:12:25] 2026-01-26 15:12:21,456 | INFO     | traces error code: 0
[2026-01-26 10:12:25] 2026-01-26 15:12:21,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 10:12:25] 2026-01-26 15:12:24,094 [wrapper] ==== pilot stdout END ====
[2026-01-26 10:12:25] 2026-01-26 15:12:24,097 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 10:12:25] 2026-01-26 15:12:24,099 [wrapper] pilotpid: 1276224
[2026-01-26 10:12:25] 2026-01-26 15:12:24,101 [wrapper] Pilot exit status: 0
[2026-01-26 10:12:25] 2026-01-26 15:12:24,220 [wrapper] pandaids: 6983771597
[2026-01-26 10:12:25] 2026-01-26 15:12:24,801 [wrapper] cleanup supervisor_pilot 2200395 1276225
[2026-01-26 10:12:25] 2026-01-26 15:12:24,814 [wrapper] Test setup, not cleaning
[2026-01-26 10:12:25] 2026-01-26 15:12:24,834 [wrapper] apfmon messages muted
[2026-01-26 10:12:25] 2026-01-26 15:12:24,858 [wrapper] ==== wrapper stdout END ====
[2026-01-26 10:12:25] 2026-01-26 15:12:24,878 [wrapper] ==== wrapper stderr END ====
[2026-01-26 10:12:25]  *** Error codes and diagnostics ***
[2026-01-26 10:12:25]     "exeErrorCode": 0,
[2026-01-26 10:12:25]     "exeErrorDiag": "",
[2026-01-26 10:12:25]     "pilotErrorCode": 0,
[2026-01-26 10:12:25]     "pilotErrorDiag": "",
[2026-01-26 10:12:25]  *** Listing of results directory ***
[2026-01-26 10:12:25] total 680668
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 10:12:25] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 10:12:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:03 run_atlas
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:03 job.xml
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas 500453792 Jan 26 00:03 EVNT.48317869._000031.pool.root.1
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 10:12:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:03 shared
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas    597749 Jan 26 00:03 input.tar.gz
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:03 boinc_lockfile
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas      2513 Jan 26 00:03 pandaJob.out
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas        57 Jan 26 00:03 setup.sh.local
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas   1004246 Jan 26 00:05 agis_schedconf.cvmfs.json
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas       442 Jan 26 00:05 workernode_map.json
[2026-01-26 10:12:25] drwx------. 5 boincer umatlas      4096 Jan 26 00:06 pilot3
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas 182370545 Jan 26 10:08 HITS.48317872._001520.pool.root.1
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas       532 Jan 26 10:08 boinc_task_state.xml
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas      1040 Jan 26 10:11 memory_monitor_summary.json
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas        95 Jan 26 10:11 pilot_heartbeat.json
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas   1516246 Jan 26 10:11 agis_ddmendpoints.agis.ALL.json
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas    778582 Jan 26 10:11 log.48317872._001520.job.log.tgz.1
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas      6388 Jan 26 10:11 heartbeat.json
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas      6660 Jan 26 10:12 init_data.xml
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 10:12 boinc_mmap_file
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas        28 Jan 26 10:12 wrapper_checkpoint.txt
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas      4819 Jan 26 10:12 pilotlog.txt
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas   4334419 Jan 26 10:12 log.48317872._001520.job.log.1
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas       357 Jan 26 10:12 output.list
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas       620 Jan 26 10:12 runtime_log
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas   5130240 Jan 26 10:12 result.tar.gz
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas      9344 Jan 26 10:12 runtime_log.err
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas       657 Jan 26 10:12 0wlMDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbh8KDm729NHo.diag
[2026-01-26 10:12:25] -rw-r--r--. 1 boincer umatlas     21436 Jan 26 10:12 stderr.txt
[2026-01-26 10:12:25] HITS file was successfully produced:
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas 182370545 Jan 26 10:08 shared/HITS.pool.root.1
[2026-01-26 10:12:25]  *** Contents of shared directory: ***
[2026-01-26 10:12:25] total 672448
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas 500453792 Jan 26 00:03 ATLAS.root_0
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 10:12:25] -rw-r--r--. 2 boincer umatlas    597749 Jan 26 00:03 input.tar.gz
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas 182370545 Jan 26 10:08 HITS.pool.root.1
[2026-01-26 10:12:25] -rw-------. 1 boincer umatlas   5130240 Jan 26 10:12 result.tar.gz
10:12:47 (1268597): run_atlas exited; CPU time 50316.649007
10:12:47 (1268597): called boinc_finish(0)

</stderr_txt>
]]>

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