Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:17 (845107): wrapper (7.7.26015): starting
00:03:17 (845107): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 00:03:17] Arguments: --nthreads 12
[2026-01-26 00:03:17] Threads: 12
[2026-01-26 00:03:17] Checking for CVMFS
[2026-01-26 00:03:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:03:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:03:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:03:18] 2.13.3.0 11772 117399 196948 155532 0 344 19111298 32935937 22379 16776704 0 593053940 99.536 738487946 37382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 00:03:18] CVMFS is ok
[2026-01-26 00:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:03:18] Further information can be found at the LHC@home message board.
[2026-01-26 00:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:03:18] Checking for apptainer binary...
[2026-01-26 00:03:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:03:18] Running /usr/bin/apptainer --version
[2026-01-26 00:03:18] apptainer version 1.4.5-2.el9
[2026-01-26 00:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:03:19] c7-3-28.aglt2.org
[2026-01-26 00:03:19] apptainer works
[2026-01-26 00:03:19] Set ATHENA_PROC_NUMBER=12
[2026-01-26 00:03:19] Set ATHENA_CORE_NUMBER=12
[2026-01-26 00:03:19] Starting ATLAS job with PandaID=6983770933
[2026-01-26 00:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 08:08:57]  *** The last 200 lines of the pilot log: ***
[2026-01-26 08:08:57] 2026-01-26 13:08:03,276 | INFO     | mean y: 2652437.4122807016
[2026-01-26 08:08:57] 2026-01-26 13:08:03,276 | INFO     | intersect: -11089225323.879099
[2026-01-26 08:08:57] 2026-01-26 13:08:03,277 | INFO     | chi2: 0.7832503140013626
[2026-01-26 08:08:57] 2026-01-26 13:08:03,277 | INFO     | current chi2=0.7832503140013626 (change=34.34612887226729 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,277 | INFO     | sum of square deviations: 28445096818.00456
[2026-01-26 08:08:57] 2026-01-26 13:08:03,281 | INFO     | sum of deviations: 133190932808.0509
[2026-01-26 08:08:57] 2026-01-26 13:08:03,281 | INFO     | mean x: 1769419122.0665188
[2026-01-26 08:08:57] 2026-01-26 13:08:03,281 | INFO     | mean y: 2660585.7649667407
[2026-01-26 08:08:57] 2026-01-26 13:08:03,282 | INFO     | intersect: -8282443342.841544
[2026-01-26 08:08:57] 2026-01-26 13:08:03,282 | INFO     | chi2: 0.4419349442738077
[2026-01-26 08:08:57] 2026-01-26 13:08:03,282 | INFO     | current chi2=0.4419349442738077 (change=43.576793220023035 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,282 | INFO     | sum of square deviations: 27509470125.481945
[2026-01-26 08:08:57] 2026-01-26 13:08:03,286 | INFO     | sum of deviations: 93873207866.2892
[2026-01-26 08:08:57] 2026-01-26 13:08:03,287 | INFO     | mean x: 1769419274.5672646
[2026-01-26 08:08:57] 2026-01-26 13:08:03,287 | INFO     | mean y: 2666989.5403587446
[2026-01-26 08:08:57] 2026-01-26 13:08:03,287 | INFO     | intersect: -6035292397.042392
[2026-01-26 08:08:57] 2026-01-26 13:08:03,287 | INFO     | chi2: 0.2351896777174887
[2026-01-26 08:08:57] 2026-01-26 13:08:03,287 | INFO     | current chi2=0.2351896777174887 (change=46.78183276410628 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,288 | INFO     | sum of square deviations: 26594588007.959194
[2026-01-26 08:08:57] 2026-01-26 13:08:03,292 | INFO     | sum of deviations: 60009251560.326515
[2026-01-26 08:08:57] 2026-01-26 13:08:03,292 | INFO     | mean x: 1769419427.0680273
[2026-01-26 08:08:57] 2026-01-26 13:08:03,292 | INFO     | mean y: 2672634.455782313
[2026-01-26 08:08:57] 2026-01-26 13:08:03,292 | INFO     | intersect: -3989926742.6383915
[2026-01-26 08:08:57] 2026-01-26 13:08:03,293 | INFO     | chi2: 0.0787346847354681
[2026-01-26 08:08:57] 2026-01-26 13:08:03,293 | INFO     | current chi2=0.0787346847354681 (change=66.5228995168552 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,293 | INFO     | sum of square deviations: 25700217902.9358
[2026-01-26 08:08:57] 2026-01-26 13:08:03,298 | INFO     | sum of deviations: 40431784552.06421
[2026-01-26 08:08:57] 2026-01-26 13:08:03,298 | INFO     | mean x: 1769419579.5688074
[2026-01-26 08:08:57] 2026-01-26 13:08:03,298 | INFO     | mean y: 2675960.1811926607
[2026-01-26 08:08:57] 2026-01-26 13:08:03,298 | INFO     | intersect: -2780988812.371485
[2026-01-26 08:08:57] 2026-01-26 13:08:03,298 | INFO     | chi2: 0.004922869095512988
[2026-01-26 08:08:57] 2026-01-26 13:08:03,299 | INFO     | current chi2=0.004922869095512988 (change=93.74752167732329 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,299 | INFO     | sum of square deviations: 24826127247.91182
[2026-01-26 08:08:57] 2026-01-26 13:08:03,303 | INFO     | sum of deviations: 36684682297.40834
[2026-01-26 08:08:57] 2026-01-26 13:08:03,303 | INFO     | mean x: 1769419732.0696056
[2026-01-26 08:08:57] 2026-01-26 13:08:03,303 | INFO     | mean y: 2676613.519721578
[2026-01-26 08:08:57] 2026-01-26 13:08:03,303 | INFO     | intersect: -2611931781.641817
[2026-01-26 08:08:57] 2026-01-26 13:08:03,304 | INFO     | chi2: 0.003937773311092673
[2026-01-26 08:08:57] 2026-01-26 13:08:03,304 | INFO     | current chi2=0.003937773311092673 (change=20.01060286811594 %)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,304 | INFO     | left removable region: 90
[2026-01-26 08:08:57] 2026-01-26 13:08:03,304 | INFO     | sum of square deviations: 17014765232.631594
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | sum of deviations: 24782677618.052628
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | mean x: 1769420921.5789473
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | mean y: 2678379.081578947
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | intersect: -2574553082.5685334
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | chi2: 0.0011285056613769939
[2026-01-26 08:08:57] 2026-01-26 13:08:03,308 | INFO     | current memory leak: 1.46 B/s (using 380 data points, chi2=0.00)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,309 | INFO     | could have reported an average CPU frequency of 3216 MHz (20 samples)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,309 | INFO     | ..............................
[2026-01-26 08:08:57] 2026-01-26 13:08:03,309 | INFO     | . Timing measurements:
[2026-01-26 08:08:57] 2026-01-26 13:08:03,309 | INFO     | . get job = 0 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,309 | INFO     | . initial setup = 19 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | . payload setup = 8 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | . stage-in = 0 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | . payload execution = 29015 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | . stage-out = 4 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | . log creation = 0 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,310 | INFO     | ..............................
[2026-01-26 08:08:57] 2026-01-26 13:08:03,453 | INFO     | 
[2026-01-26 08:08:57] 2026-01-26 13:08:03,453 | INFO     | job summary report
[2026-01-26 08:08:57] 2026-01-26 13:08:03,453 | INFO     | --------------------------------------------------
[2026-01-26 08:08:57] 2026-01-26 13:08:03,453 | INFO     | PanDA job id: 6983770933
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | task id: 48318034
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | errors: (none)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | pilot state: finished 
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | transexitcode: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | exeerrorcode: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | exeerrordiag: 
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | exitcode: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | exitmsg: OK
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | cpuconsumptiontime: 31866 s
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | nevents: 400
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | neventsw: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | pid: 869025
[2026-01-26 08:08:57] 2026-01-26 13:08:03,454 | INFO     | pgrp: 869025
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | corecount: 12
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | event service: False
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | sizes: {0: 2283764, 1: 2283764, 2: 2284225, 12: 2284253, 29025: 2322131, 29029: 2331129, 29031: 2331507}
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | --------------------------------------------------
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | 
[2026-01-26 08:08:57] 2026-01-26 13:08:03,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-26 08:08:57] 2026-01-26 13:08:03,532 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 08:08:57] 2026-01-26 13:08:03,536 | INFO     | job 6983770933 has completed (purged errors)
[2026-01-26 08:08:57] 2026-01-26 13:08:03,536 | INFO     | overall cleanup function is called
[2026-01-26 08:08:57] 2026-01-26 13:08:03,827 | INFO     | PID=851643 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 08:08:57] 2026-01-26 13:08:03,828 | INFO     | .. there are 18 such processes running
[2026-01-26 08:08:57] 2026-01-26 13:08:04,554 | INFO     | --- collectZombieJob: --- 10, [869025]
[2026-01-26 08:08:57] 2026-01-26 13:08:04,554 | INFO     | zombie collector waiting for pid 869025
[2026-01-26 08:08:57] 2026-01-26 13:08:04,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 08:08:57] 2026-01-26 13:08:04,554 | INFO     | collected zombie processes
[2026-01-26 08:08:57] 2026-01-26 13:08:04,554 | INFO     | will attempt to kill all subprocesses of pid=869025
[2026-01-26 08:08:57] 2026-01-26 13:08:06,127 | INFO     | process IDs to be killed: [869025] (in reverse order)
[2026-01-26 08:08:57] 2026-01-26 13:08:06,208 | WARNING  | process 869025 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 08:08:57] 2026-01-26 13:08:06,339 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 08:08:57] 2026-01-26 13:08:06,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 08:08:57] 2026-01-26 13:08:06,363 | INFO     | did not find any defunct processes belonging to 869025
[2026-01-26 08:08:57] 2026-01-26 13:08:06,380 | INFO     | did not find any defunct processes belonging to 869025
[2026-01-26 08:08:57] 2026-01-26 13:08:06,381 | INFO     | ready for new job
[2026-01-26 08:08:57] 2026-01-26 13:08:06,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 08:08:57] 2026-01-26 13:08:06,383 | INFO     | **************************************
[2026-01-26 08:08:57] 2026-01-26 13:08:06,383 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 08:08:57] 2026-01-26 13:08:06,383 | INFO     | **************************************
[2026-01-26 08:08:57] 2026-01-26 13:08:06,383 | INFO     | 
[2026-01-26 08:08:57] 2026-01-26 13:08:06,388 | INFO     | architecture information:
[2026-01-26 08:08:57] 2026-01-26 13:08:06,388 | INFO     | executing command: cat /etc/os-release
[2026-01-26 08:08:57] 2026-01-26 13:08:06,403 | INFO     | cat /etc/os-release:
[2026-01-26 08:08:57] NAME="CentOS Linux"
[2026-01-26 08:08:57] VERSION="7 (Core)"
[2026-01-26 08:08:57] ID="centos"
[2026-01-26 08:08:57] ID_LIKE="rhel fedora"
[2026-01-26 08:08:57] VERSION_ID="7"
[2026-01-26 08:08:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 08:08:57] ANSI_COLOR="0;31"
[2026-01-26 08:08:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 08:08:57] HOME_URL="https://www.centos.org/"
[2026-01-26 08:08:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 08:08:57] 
[2026-01-26 08:08:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 08:08:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 08:08:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 08:08:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 08:08:57] 
[2026-01-26 08:08:57] 2026-01-26 13:08:06,403 | INFO     | **************************************
[2026-01-26 08:08:57] 2026-01-26 13:08:06,909 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-26 08:08:57] 2026-01-26 13:08:06,951 | INFO     | sufficient remaining disk space (69898076160 B)
[2026-01-26 08:08:57] 2026-01-26 13:08:06,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 08:08:57] 2026-01-26 13:08:06,952 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 08:08:57] 2026-01-26 13:08:06,952 | INFO     | update_server=False
[2026-01-26 08:08:57] 2026-01-26 13:08:06,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 08:08:57] 2026-01-26 13:08:07,071 | INFO     | using path: /tmp/boinchome/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:08:57] 2026-01-26 13:08:07,091 | INFO     | all data control threads have been joined
[2026-01-26 08:08:57] 2026-01-26 13:08:07,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 08:08:57] 2026-01-26 13:08:07,557 | INFO     | all payload control threads have been joined
[2026-01-26 08:08:57] 2026-01-26 13:08:07,958 | INFO     | [job] retrieve thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:08,021 | INFO     | number of running child processes to parent process 869025: 1
[2026-01-26 08:08:57] 2026-01-26 13:08:08,021 | INFO     | maximum number of monitored processes: 6
[2026-01-26 08:08:57] 2026-01-26 13:08:08,021 | INFO     | aborting job monitoring since job object (job id=6983770933) has expired
[2026-01-26 08:08:57] 2026-01-26 13:08:08,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:08:57] 2026-01-26 13:08:08,021 | INFO     | will abort loop
[2026-01-26 08:08:57] 2026-01-26 13:08:08,097 | INFO     | [data] control thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:08,101 | INFO     | [job] validate thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:08,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:08:57] 2026-01-26 13:08:08,525 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:08,563 | INFO     | [payload] control thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:08,590 | INFO     | all job control threads have been joined
[2026-01-26 08:08:57] 2026-01-26 13:08:08,617 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,019 | INFO     | [payload] failed_post thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,027 | INFO     | [job] job monitor thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,098 | INFO     | [data] copytool_in thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,161 | INFO     | [data] copytool_out thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,225 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 08:08:57] 2026-01-26 13:08:09,416 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,432 | INFO     | [payload] validate_post thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,494 | INFO     | [job] queue monitor thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:09,596 | INFO     | [job] control thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:13,237 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 08:08:57] 2026-01-26 13:08:36,936 | INFO     | PID=851643 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 08:08:57] 2026-01-26 13:08:36,936 | INFO     | .. there are 18 such processes running
[2026-01-26 08:08:57] 2026-01-26 13:08:36,937 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 08:08:57] 2026-01-26 13:08:36,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 08:08:57] 2026-01-26 13:08:36,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 08:08:57] 2026-01-26 13:08:48,980 | INFO     | [monitor] cgroup control has ended
[2026-01-26 08:08:57] 2026-01-26 13:08:50,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453280556864)>', '<ExcThread(monitor, started 140452787373824)>']
[2026-01-26 08:08:57] 2026-01-26 13:08:51,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 08:08:57] 2026-01-26 13:08:51,046 | INFO     | [monitor] control thread has ended
[2026-01-26 08:08:57] 2026-01-26 13:08:55,752 | INFO     | all workflow threads have been joined
[2026-01-26 08:08:57] 2026-01-26 13:08:55,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 08:08:57] 2026-01-26 13:08:55,752 | INFO     | traces error code: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:55,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 08:08:57] 2026-01-26 13:08:56,549 [wrapper] ==== pilot stdout END ====
[2026-01-26 08:08:57] 2026-01-26 13:08:56,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 08:08:57] 2026-01-26 13:08:56,615 [wrapper] pilotpid: 851643
[2026-01-26 08:08:57] 2026-01-26 13:08:56,657 [wrapper] Pilot exit status: 0
[2026-01-26 08:08:57] 2026-01-26 13:08:56,762 [wrapper] pandaids: 6983770933
[2026-01-26 08:08:57] 2026-01-26 13:08:56,941 [wrapper] cleanup supervisor_pilot 2090352 851644
[2026-01-26 08:08:57] 2026-01-26 13:08:56,980 [wrapper] Test setup, not cleaning
[2026-01-26 08:08:57] 2026-01-26 13:08:57,014 [wrapper] apfmon messages muted
[2026-01-26 08:08:57] 2026-01-26 13:08:57,024 [wrapper] ==== wrapper stdout END ====
[2026-01-26 08:08:57] 2026-01-26 13:08:57,036 [wrapper] ==== wrapper stderr END ====
[2026-01-26 08:08:57]  *** Error codes and diagnostics ***
[2026-01-26 08:08:57]     "exeErrorCode": 0,
[2026-01-26 08:08:57]     "exeErrorDiag": "",
[2026-01-26 08:08:57]     "pilotErrorCode": 0,
[2026-01-26 08:08:57]     "pilotErrorDiag": "",
[2026-01-26 08:08:57]  *** Listing of results directory ***
[2026-01-26 08:08:57] total 671212
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 08:08:57] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 08:08:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:03 run_atlas
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:03 job.xml
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas 493750168 Jan 26 00:03 EVNT.48318032._000051.pool.root.1
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 08:08:57] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:03 shared
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas    597763 Jan 26 00:03 input.tar.gz
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:03 boinc_lockfile
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas      2531 Jan 26 00:03 pandaJob.out
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas        57 Jan 26 00:03 setup.sh.local
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas   1004246 Jan 26 00:03 agis_schedconf.cvmfs.json
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas       429 Jan 26 00:03 workernode_map.json
[2026-01-26 08:08:57] drwx------. 5 boincer umatlas      4096 Jan 26 00:03 pilot3
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas      6946 Jan 26 08:00 init_data.xml
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas 180562639 Jan 26 08:07 HITS.48318034._002053.pool.root.1
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas       531 Jan 26 08:07 boinc_task_state.xml
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas      1042 Jan 26 08:07 memory_monitor_summary.json
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas   1516246 Jan 26 08:07 agis_ddmendpoints.agis.ALL.json
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas    713277 Jan 26 08:08 log.48318034._002053.job.log.tgz.1
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas      6345 Jan 26 08:08 heartbeat.json
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas        95 Jan 26 08:08 pilot_heartbeat.json
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas        28 Jan 26 08:08 wrapper_checkpoint.txt
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 08:08 boinc_mmap_file
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas      5225 Jan 26 08:08 pilotlog.txt
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas   3817490 Jan 26 08:08 log.48318034._002053.job.log.1
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas       357 Jan 26 08:08 output.list
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas       620 Jan 26 08:08 runtime_log
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas   4546560 Jan 26 08:08 result.tar.gz
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas      9339 Jan 26 08:08 runtime_log.err
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas       660 Jan 26 08:08 PgtLDmTKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk81KDm2dHYFm.diag
[2026-01-26 08:08:57] -rw-r--r--. 1 boincer umatlas     21304 Jan 26 08:08 stderr.txt
[2026-01-26 08:08:57] HITS file was successfully produced:
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas 180562639 Jan 26 08:07 shared/HITS.pool.root.1
[2026-01-26 08:08:57]  *** Contents of shared directory: ***
[2026-01-26 08:08:57] total 663560
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas 493750168 Jan 26 00:03 ATLAS.root_0
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:03 start_atlas.sh
[2026-01-26 08:08:57] -rw-r--r--. 2 boincer umatlas    597763 Jan 26 00:03 input.tar.gz
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas 180562639 Jan 26 08:07 HITS.pool.root.1
[2026-01-26 08:08:57] -rw-------. 1 boincer umatlas   4546560 Jan 26 08:08 result.tar.gz
08:08:59 (845107): run_atlas exited; CPU time 33072.808739
08:08:59 (845107): called boinc_finish(0)

</stderr_txt>
]]>

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