Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:06 (1274797): wrapper (7.7.26015): starting
00:04:06 (1274797): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 00:04:06] Arguments: --nthreads 9
[2026-01-26 00:04:06] Threads: 9
[2026-01-26 00:04:06] Checking for CVMFS
[2026-01-26 00:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:04:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:04:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:04:08] 2.13.3.0 4451 4731 246304 155532 1 644 20524880 40960001 54031 16776704 0 42171025 99.825 23216270 30316 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 00:04:08] CVMFS is ok
[2026-01-26 00:04:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:04:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:04:08] Further information can be found at the LHC@home message board.
[2026-01-26 00:04:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:04:08] Checking for apptainer binary...
[2026-01-26 00:04:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:04:08] Running /usr/bin/apptainer --version
[2026-01-26 00:04:08] apptainer version 1.4.5-2.el9
[2026-01-26 00:04:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:04:08] lc-12-9.aglt2.org
[2026-01-26 00:04:08] apptainer works
[2026-01-26 00:04:09] Set ATHENA_PROC_NUMBER=9
[2026-01-26 00:04:09] Set ATHENA_CORE_NUMBER=9
[2026-01-26 00:04:09] Starting ATLAS job with PandaID=6983771373
[2026-01-26 00:04:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 07:28:14]  *** The last 200 lines of the pilot log: ***
[2026-01-26 07:28:14] 2026-01-26 12:26:44,985 | INFO     | sum of square deviations: 24141547327.17564
[2026-01-26 07:28:14] 2026-01-26 12:26:44,993 | INFO     | sum of deviations: 103059864839.0422
[2026-01-26 07:28:14] 2026-01-26 12:26:44,993 | INFO     | mean x: 1769417343.8266978
[2026-01-26 07:28:14] 2026-01-26 12:26:44,994 | INFO     | mean y: 2545028.838407494
[2026-01-26 07:28:14] 2026-01-26 12:26:44,994 | INFO     | intersect: -7551068243.22234
[2026-01-26 07:28:14] 2026-01-26 12:26:44,994 | INFO     | chi2: 0.36037699862140726
[2026-01-26 07:28:14] 2026-01-26 12:26:44,994 | INFO     | current chi2=0.36037699862140726 (change=89.06611899642233 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,004 | INFO     | sum of square deviations: 23303275106.218094
[2026-01-26 07:28:14] 2026-01-26 12:26:45,019 | INFO     | sum of deviations: 68196325581.37912
[2026-01-26 07:28:14] 2026-01-26 12:26:45,019 | INFO     | mean x: 1769417496.3364928
[2026-01-26 07:28:14] 2026-01-26 12:26:45,019 | INFO     | mean y: 2551360.2156398105
[2026-01-26 07:28:14] 2026-01-26 12:26:45,019 | INFO     | intersect: -5175595107.160268
[2026-01-26 07:28:14] 2026-01-26 12:26:45,020 | INFO     | chi2: 0.14589400168567676
[2026-01-26 07:28:14] 2026-01-26 12:26:45,020 | INFO     | current chi2=0.14589400168567676 (change=59.51628371294996 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,020 | INFO     | sum of square deviations: 22484657146.868267
[2026-01-26 07:28:14] 2026-01-26 12:26:45,034 | INFO     | sum of deviations: 41403076129.076744
[2026-01-26 07:28:14] 2026-01-26 12:26:45,035 | INFO     | mean x: 1769417648.8441248
[2026-01-26 07:28:14] 2026-01-26 12:26:45,035 | INFO     | mean y: 2556351.9088729015
[2026-01-26 07:28:14] 2026-01-26 12:26:45,035 | INFO     | intersect: -3255635807.335551
[2026-01-26 07:28:14] 2026-01-26 12:26:45,035 | INFO     | chi2: 0.02643735577156735
[2026-01-26 07:28:14] 2026-01-26 12:26:45,036 | INFO     | current chi2=0.02643735577156735 (change=81.8790659889324 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,036 | INFO     | sum of square deviations: 21685459971.669907
[2026-01-26 07:28:14] 2026-01-26 12:26:45,060 | INFO     | sum of deviations: 32328627719.194195
[2026-01-26 07:28:14] 2026-01-26 12:26:45,060 | INFO     | mean x: 1769417801.3495145
[2026-01-26 07:28:14] 2026-01-26 12:26:45,060 | INFO     | mean y: 2558075.9708737866
[2026-01-26 07:28:14] 2026-01-26 12:26:45,060 | INFO     | intersect: -2635285412.4436636
[2026-01-26 07:28:14] 2026-01-26 12:26:45,061 | INFO     | chi2: 0.0028247795289715934
[2026-01-26 07:28:14] 2026-01-26 12:26:45,061 | INFO     | current chi2=0.0028247795289715934 (change=89.31519644634973 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,061 | INFO     | sum of square deviations: 20905450955.154755
[2026-01-26 07:28:14] 2026-01-26 12:26:45,097 | INFO     | sum of deviations: 29133141677.864857
[2026-01-26 07:28:14] 2026-01-26 12:26:45,097 | INFO     | mean x: 1769417953.8525798
[2026-01-26 07:28:14] 2026-01-26 12:26:45,097 | INFO     | mean y: 2558700.081081081
[2026-01-26 07:28:14] 2026-01-26 12:26:45,097 | INFO     | intersect: -2463243355.446181
[2026-01-26 07:28:14] 2026-01-26 12:26:45,098 | INFO     | chi2: 0.0019233487567409566
[2026-01-26 07:28:14] 2026-01-26 12:26:45,098 | INFO     | current chi2=0.0019233487567409566 (change=31.91154435188141 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,099 | INFO     | sum of square deviations: 20144322994.698975
[2026-01-26 07:28:14] 2026-01-26 12:26:45,132 | INFO     | sum of deviations: 27019350736.71394
[2026-01-26 07:28:14] 2026-01-26 12:26:45,133 | INFO     | mean x: 1769418106.3606966
[2026-01-26 07:28:14] 2026-01-26 12:26:45,133 | INFO     | mean y: 2559123.4502487564
[2026-01-26 07:28:14] 2026-01-26 12:26:45,133 | INFO     | intersect: -2370741206.7833757
[2026-01-26 07:28:14] 2026-01-26 12:26:45,134 | INFO     | chi2: 0.0016850758429752344
[2026-01-26 07:28:14] 2026-01-26 12:26:45,134 | INFO     | current chi2=0.0016850758429752344 (change=12.388440366346606 %)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,134 | INFO     | left removable region: 60
[2026-01-26 07:28:14] 2026-01-26 12:26:45,134 | INFO     | sum of square deviations: 15202313225.204859
[2026-01-26 07:28:14] 2026-01-26 12:26:45,153 | INFO     | sum of deviations: 18720191742.10656
[2026-01-26 07:28:14] 2026-01-26 12:26:45,154 | INFO     | mean x: 1769418838.3688524
[2026-01-26 07:28:14] 2026-01-26 12:26:45,154 | INFO     | mean y: 2560138.658469945
[2026-01-26 07:28:14] 2026-01-26 12:26:45,154 | INFO     | intersect: -2176309579.10542
[2026-01-26 07:28:14] 2026-01-26 12:26:45,154 | INFO     | chi2: 0.0011823861814406363
[2026-01-26 07:28:14] 2026-01-26 12:26:45,155 | INFO     | current memory leak: 1.23 B/s (using 366 data points, chi2=0.00)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,155 | INFO     | could have reported an average CPU frequency of 2695 MHz (18 samples)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | ..............................
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . Timing measurements:
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . get job = 0 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . initial setup = 44 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . payload setup = 43 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . stage-in = 0 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . payload execution = 26373 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . stage-out = 5 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | . log creation = 0 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,156 | INFO     | ..............................
[2026-01-26 07:28:14] 2026-01-26 12:26:45,850 | INFO     | 
[2026-01-26 07:28:14] 2026-01-26 12:26:45,850 | INFO     | job summary report
[2026-01-26 07:28:14] 2026-01-26 12:26:45,850 | INFO     | --------------------------------------------------
[2026-01-26 07:28:14] 2026-01-26 12:26:45,850 | INFO     | PanDA job id: 6983771373
[2026-01-26 07:28:14] 2026-01-26 12:26:45,850 | INFO     | task id: 48298567
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | errors: (none)
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | pilot state: finished 
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | transexitcode: 0
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | exeerrorcode: 0
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | exeerrordiag: 
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | exitcode: 0
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | exitmsg: OK
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | cpuconsumptiontime: 51328 s
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | nevents: 400
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | neventsw: 0
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | pid: 1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:45,851 | INFO     | pgrp: 1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | corecount: 9
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | event service: False
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | sizes: {0: 2283275, 1: 2283876, 2: 2283988, 3: 2284449, 14: 2284449, 26421: 2320364, 26422: 2320491, 26429: 2329545, 26432: 2329601, 26434: 2329795}
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | --------------------------------------------------
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | 
[2026-01-26 07:28:14] 2026-01-26 12:26:45,852 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-26 07:28:14] 2026-01-26 12:26:46,145 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,145 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,145 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,145 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | job 6983771373 has completed (purged errors)
[2026-01-26 07:28:14] 2026-01-26 12:26:46,147 | INFO     | overall cleanup function is called
[2026-01-26 07:28:14] 2026-01-26 12:26:47,182 | INFO     | --- collectZombieJob: --- 10, [1309327]
[2026-01-26 07:28:14] 2026-01-26 12:26:47,183 | INFO     | zombie collector waiting for pid 1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:47,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 07:28:14] 2026-01-26 12:26:47,183 | INFO     | collected zombie processes
[2026-01-26 07:28:14] 2026-01-26 12:26:47,183 | INFO     | will attempt to kill all subprocesses of pid=1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:47,348 | INFO     | PID=1282058 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 07:28:14] 2026-01-26 12:26:47,348 | INFO     | .. there are 75 such processes running
[2026-01-26 07:28:14] 2026-01-26 12:26:48,454 | INFO     | process IDs to be killed: [1309327] (in reverse order)
[2026-01-26 07:28:14] 2026-01-26 12:26:48,711 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 07:28:14] 2026-01-26 12:26:48,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 07:28:14] 2026-01-26 12:26:48,781 | INFO     | did not find any defunct processes belonging to 1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:48,890 | INFO     | did not find any defunct processes belonging to 1309327
[2026-01-26 07:28:14] 2026-01-26 12:26:48,890 | INFO     | ready for new job
[2026-01-26 07:28:14] 2026-01-26 12:26:48,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 07:28:14] 2026-01-26 12:26:48,896 | INFO     | **************************************
[2026-01-26 07:28:14] 2026-01-26 12:26:48,897 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 07:28:14] 2026-01-26 12:26:48,897 | INFO     | **************************************
[2026-01-26 07:28:14] 2026-01-26 12:26:48,897 | INFO     | 
[2026-01-26 07:28:14] 2026-01-26 12:26:48,906 | INFO     | architecture information:
[2026-01-26 07:28:14] 2026-01-26 12:26:48,910 | INFO     | executing command: cat /etc/os-release
[2026-01-26 07:28:14] 2026-01-26 12:26:48,967 | INFO     | cat /etc/os-release:
[2026-01-26 07:28:14] NAME="CentOS Linux"
[2026-01-26 07:28:14] VERSION="7 (Core)"
[2026-01-26 07:28:14] ID="centos"
[2026-01-26 07:28:14] ID_LIKE="rhel fedora"
[2026-01-26 07:28:14] VERSION_ID="7"
[2026-01-26 07:28:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 07:28:14] ANSI_COLOR="0;31"
[2026-01-26 07:28:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 07:28:14] HOME_URL="https://www.centos.org/"
[2026-01-26 07:28:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 07:28:14] 
[2026-01-26 07:28:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 07:28:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 07:28:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 07:28:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 07:28:14] 
[2026-01-26 07:28:14] 2026-01-26 12:26:48,967 | INFO     | **************************************
[2026-01-26 07:28:14] 2026-01-26 12:26:49,471 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 07:28:14] 2026-01-26 12:26:49,555 | INFO     | sufficient remaining disk space (398701101056 B)
[2026-01-26 07:28:14] 2026-01-26 12:26:49,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 07:28:14] 2026-01-26 12:26:49,556 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 07:28:14] 2026-01-26 12:26:49,556 | INFO     | update_server=False
[2026-01-26 07:28:14] 2026-01-26 12:26:49,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 07:28:14] 2026-01-26 12:26:49,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 07:28:14] 2026-01-26 12:26:49,647 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 07:28:14] 2026-01-26 12:26:49,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 07:28:14] 2026-01-26 12:26:49,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:28:14] 2026-01-26 12:26:49,647 | INFO     | will abort loop
[2026-01-26 07:28:14] 2026-01-26 12:26:49,996 | INFO     | all payload control threads have been joined
[2026-01-26 07:28:14] 2026-01-26 12:26:50,402 | INFO     | all data control threads have been joined
[2026-01-26 07:28:14] 2026-01-26 12:26:50,562 | INFO     | [job] retrieve thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:50,653 | INFO     | [job] job monitor thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:50,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 07:28:14] 2026-01-26 12:26:50,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:28:14] 2026-01-26 12:26:50,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,003 | INFO     | [payload] control thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,078 | INFO     | all job control threads have been joined
[2026-01-26 07:28:14] 2026-01-26 12:26:51,105 | INFO     | [payload] validate_post thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,408 | INFO     | [data] control thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,797 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,899 | INFO     | [job] queue monitor thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:51,939 | INFO     | [payload] failed_post thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,033 | INFO     | [job] validate thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,048 | INFO     | [data] copytool_in thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,048 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,049 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,088 | INFO     | [job] control thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:52,697 | INFO     | [data] copytool_out thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:26:53,565 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 07:28:14] 2026-01-26 12:27:21,292 | INFO     | PID=1282058 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 07:28:14] 2026-01-26 12:27:21,293 | INFO     | .. there are 75 such processes running
[2026-01-26 07:28:14] 2026-01-26 12:27:21,293 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 07:28:14] 2026-01-26 12:27:21,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 07:28:14] 2026-01-26 12:27:21,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 07:28:14] 2026-01-26 12:27:46,925 | INFO     | [monitor] cgroup control has ended
[2026-01-26 07:28:14] 2026-01-26 12:27:48,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292925404992)>', '<ExcThread(monitor, started 140292489475840)>']
[2026-01-26 07:28:14] 2026-01-26 12:27:48,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 07:28:14] 2026-01-26 12:27:48,527 | INFO     | [monitor] control thread has ended
[2026-01-26 07:28:14] 2026-01-26 12:27:53,364 | INFO     | all workflow threads have been joined
[2026-01-26 07:28:14] 2026-01-26 12:27:53,365 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 07:28:14] 2026-01-26 12:27:53,365 | INFO     | traces error code: 0
[2026-01-26 07:28:14] 2026-01-26 12:27:53,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 07:28:14] 2026-01-26 12:27:55,160 [wrapper] ==== pilot stdout END ====
[2026-01-26 07:28:14] 2026-01-26 12:27:55,190 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 07:28:14] 2026-01-26 12:27:55,234 [wrapper] pilotpid: 1282058
[2026-01-26 07:28:14] 2026-01-26 12:27:55,272 [wrapper] Pilot exit status: 0
[2026-01-26 07:28:14] 2026-01-26 12:27:55,416 [wrapper] pandaids: 6983771373
[2026-01-26 07:28:14] 2026-01-26 12:27:56,284 [wrapper] cleanup supervisor_pilot 3645025 1282059
[2026-01-26 07:28:14] 2026-01-26 12:27:56,293 [wrapper] Test setup, not cleaning
[2026-01-26 07:28:14] 2026-01-26 12:27:56,325 [wrapper] apfmon messages muted
[2026-01-26 07:28:14] 2026-01-26 12:27:56,384 [wrapper] ==== wrapper stdout END ====
[2026-01-26 07:28:14] 2026-01-26 12:27:56,400 [wrapper] ==== wrapper stderr END ====
[2026-01-26 07:28:14]  *** Error codes and diagnostics ***
[2026-01-26 07:28:14]     "exeErrorCode": 0,
[2026-01-26 07:28:14]     "exeErrorDiag": "",
[2026-01-26 07:28:14]     "pilotErrorCode": 0,
[2026-01-26 07:28:14]     "pilotErrorDiag": "",
[2026-01-26 07:28:14]  *** Listing of results directory ***
[2026-01-26 07:28:14] total 418960
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 07:28:14] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 07:28:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:04 run_atlas
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:04 job.xml
[2026-01-26 07:28:14] -rw-r--r--. 2 boincer umatlas 248996819 Jan 26 00:04 EVNT.48298565._000023.pool.root.1
[2026-01-26 07:28:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:04 start_atlas.sh
[2026-01-26 07:28:14] drwxrwx--x. 2 boincer umatlas        68 Jan 26 00:04 shared
[2026-01-26 07:28:14] -rw-r--r--. 2 boincer umatlas    597768 Jan 26 00:04 input.tar.gz
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:04 boinc_lockfile
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas      2614 Jan 26 00:04 pandaJob.out
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas   1004246 Jan 26 00:05 agis_schedconf.cvmfs.json
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas       440 Jan 26 00:05 workernode_map.json
[2026-01-26 07:28:14] drwx------. 5 boincer umatlas      4096 Jan 26 00:05 pilot3
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas      6776 Jan 26 07:21 init_data.xml
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas 169098150 Jan 26 07:25 HITS.48298567._000570.pool.root.1
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas       530 Jan 26 07:25 boinc_task_state.xml
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas      1040 Jan 26 07:26 memory_monitor_summary.json
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas   1516246 Jan 26 07:26 agis_ddmendpoints.agis.ALL.json
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas    601221 Jan 26 07:26 log.48298567._000570.job.log.tgz.1
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas      6380 Jan 26 07:26 heartbeat.json
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas        95 Jan 26 07:26 pilot_heartbeat.json
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas      5007 Jan 26 07:27 pilotlog.txt
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas   2889356 Jan 26 07:27 log.48298567._000570.job.log.1
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas       357 Jan 26 07:27 output.list
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas       620 Jan 26 07:27 runtime_log
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas   3512320 Jan 26 07:27 result.tar.gz
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas      8812 Jan 26 07:27 runtime_log.err
[2026-01-26 07:28:14] -rw-------. 1 boincer umatlas       656 Jan 26 07:27 AWYLDmIKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpf8KDmgb82Wm.diag
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas        27 Jan 26 07:28 wrapper_checkpoint.txt
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 07:28 boinc_mmap_file
[2026-01-26 07:28:14] -rw-r--r--. 1 boincer umatlas     21256 Jan 26 07:28 stderr.txt
[2026-01-26 07:28:15] HITS file was successfully produced:
[2026-01-26 07:28:15] -rw-------. 1 boincer umatlas 169098150 Jan 26 07:25 shared/HITS.pool.root.1
[2026-01-26 07:28:15]  *** Contents of shared directory: ***
[2026-01-26 07:28:15] total 412336
[2026-01-26 07:28:15] -rw-r--r--. 2 boincer umatlas 248996819 Jan 26 00:04 ATLAS.root_0
[2026-01-26 07:28:15] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:04 start_atlas.sh
[2026-01-26 07:28:15] -rw-r--r--. 2 boincer umatlas    597768 Jan 26 00:04 input.tar.gz
[2026-01-26 07:28:15] -rw-------. 1 boincer umatlas 169098150 Jan 26 07:25 HITS.pool.root.1
[2026-01-26 07:28:15] -rw-------. 1 boincer umatlas   3512320 Jan 26 07:27 result.tar.gz
07:28:16 (1274797): run_atlas exited; CPU time 52918.292915
07:28:16 (1274797): called boinc_finish(0)

</stderr_txt>
]]>

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