Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:06 (3418725): wrapper (7.7.26015): starting
00:01:06 (3418725): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 00:01:06] Arguments: --nthreads 8
[2026-01-26 00:01:06] Threads: 8
[2026-01-26 00:01:06] Checking for CVMFS
[2026-01-26 00:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:01:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:01:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:01:11] 2.13.3.0 9330 117397 353712 155532 1 695 28167947 32935936 23799 16776704 0 542553977 99.700 412911198 32811 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 00:01:11] CVMFS is ok
[2026-01-26 00:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:01:11] Further information can be found at the LHC@home message board.
[2026-01-26 00:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:01:11] Checking for apptainer binary...
[2026-01-26 00:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:01:11] Running /usr/bin/apptainer --version
[2026-01-26 00:01:11] apptainer version 1.4.5-2.el9
[2026-01-26 00:01:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:01:13] c-5-5.aglt2.org
[2026-01-26 00:01:13] apptainer works
[2026-01-26 00:01:13] Set ATHENA_PROC_NUMBER=8
[2026-01-26 00:01:13] Set ATHENA_CORE_NUMBER=8
[2026-01-26 00:01:13] Starting ATLAS job with PandaID=6983771450
[2026-01-26 00:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:00:15]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:00:15] 2026-01-27 04:59:13,331 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:00:15] 2026-01-27 04:59:13,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:00:15] 2026-01-27 04:59:13,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:00:15] 2026-01-27 04:59:13,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:00:15] 2026-01-27 04:59:13,574 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:00:15] 2026-01-27 04:59:13,576 | INFO     | sum of square deviations: 867319464887.376
[2026-01-27 00:00:15] 2026-01-27 04:59:14,143 | INFO     | sum of deviations: 1753619258817.7085
[2026-01-27 00:00:15] 2026-01-27 04:59:14,144 | INFO     | mean x: 1769446978.3782825
[2026-01-27 00:00:15] 2026-01-27 04:59:14,144 | INFO     | mean y: 2474635.6309439316
[2026-01-27 00:00:15] 2026-01-27 04:59:14,144 | INFO     | intersect: -3575141714.9301305
[2026-01-27 00:00:15] 2026-01-27 04:59:14,289 | INFO     | chi2: 8.894900799398542
[2026-01-27 00:00:15] 2026-01-27 04:59:14,291 | INFO     | sum of square deviations: 858118749782.8433
[2026-01-27 00:00:15] 2026-01-27 04:59:14,351 | INFO     | time since job start (86091s) is within the limit (349056.0s)
[2026-01-27 00:00:15] 2026-01-27 04:59:14,634 | INFO     | monitor loop #3082: job 0:6983771450 is in state 'finished'
[2026-01-27 00:00:15] 2026-01-27 04:59:14,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:00:15] 2026-01-27 04:59:14,666 | INFO     | sum of deviations: 1922399321469.121
[2026-01-27 00:00:15] 2026-01-27 04:59:14,666 | INFO     | mean x: 1769446825.8831909
[2026-01-27 00:00:15] 2026-01-27 04:59:14,666 | INFO     | mean y: 2477426.6958689457
[2026-01-27 00:00:15] 2026-01-27 04:59:14,667 | INFO     | intersect: -3961523334.6373916
[2026-01-27 00:00:15] 2026-01-27 04:59:14,669 | INFO     | chi2: 7.518456947800443
[2026-01-27 00:00:15] 2026-01-27 04:59:14,675 | INFO     | current chi2=7.518456947800443 (change=15.474527289738537 %)
[2026-01-27 00:00:15] 2026-01-27 04:59:14,675 | INFO     | right removable region: 1403
[2026-01-27 00:00:15] 2026-01-27 04:59:14,677 | INFO     | sum of square deviations: 858117650869.609
[2026-01-27 00:00:15] 2026-01-27 04:59:15,384 | INFO     | sum of deviations: 1286718013957.3264
[2026-01-27 00:00:15] 2026-01-27 04:59:15,385 | INFO     | mean x: 1769447130.8824787
[2026-01-27 00:00:15] 2026-01-27 04:59:15,385 | INFO     | mean y: 2482372.1595441597
[2026-01-27 00:00:15] 2026-01-27 04:59:15,385 | INFO     | intersect: -2650742970.24464
[2026-01-27 00:00:15] 2026-01-27 04:59:15,387 | INFO     | chi2: 4.925557048961249
[2026-01-27 00:00:15] 2026-01-27 04:59:15,387 | INFO     | current chi2=4.925557048961249 (change=44.62493556651799 %)
[2026-01-27 00:00:15] 2026-01-27 04:59:15,389 | INFO     | sum of square deviations: 848981653658.4065
[2026-01-27 00:00:15] 2026-01-27 04:59:15,443 | INFO     | sum of deviations: 942337399206.806
[2026-01-27 00:00:15] 2026-01-27 04:59:15,444 | INFO     | mean x: 1769447283.382416
[2026-01-27 00:00:15] 2026-01-27 04:59:15,444 | INFO     | mean y: 2488119.5611150824
[2026-01-27 00:00:15] 2026-01-27 04:59:15,444 | INFO     | intersect: -1961531177.9949079
[2026-01-27 00:00:15] 2026-01-27 04:59:15,446 | INFO     | chi2: 2.8296319194271073
[2026-01-27 00:00:15] 2026-01-27 04:59:15,446 | INFO     | current chi2=2.8296319194271073 (change=42.55204251417921 %)
[2026-01-27 00:00:15] 2026-01-27 04:59:15,448 | INFO     | sum of square deviations: 839910985028.9948
[2026-01-27 00:00:15] 2026-01-27 04:59:15,496 | INFO     | sum of deviations: 744929657143.8766
[2026-01-27 00:00:15] 2026-01-27 04:59:15,497 | INFO     | mean x: 1769447435.8802009
[2026-01-27 00:00:15] 2026-01-27 04:59:15,497 | INFO     | mean y: 2491437.1549497847
[2026-01-27 00:00:15] 2026-01-27 04:59:15,497 | INFO     | intersect: -1566858047.777488
[2026-01-27 00:00:15] 2026-01-27 04:59:15,499 | INFO     | chi2: 2.139893216717339
[2026-01-27 00:00:15] 2026-01-27 04:59:15,499 | INFO     | current chi2=2.139893216717339 (change=24.375562700374616 %)
[2026-01-27 00:00:15] 2026-01-27 04:59:15,499 | INFO     | left removable region: 30
[2026-01-27 00:00:15] 2026-01-27 04:59:15,501 | INFO     | sum of square deviations: 802518773948.312
[2026-01-27 00:00:15] 2026-01-27 04:59:15,578 | INFO     | sum of deviations: 604174957814.9084
[2026-01-27 00:00:15] 2026-01-27 04:59:15,579 | INFO     | mean x: 1769447710.3889294
[2026-01-27 00:00:15] 2026-01-27 04:59:15,579 | INFO     | mean y: 2499633.664967225
[2026-01-27 00:00:15] 2026-01-27 04:59:15,579 | INFO     | intersect: -1329626206.233169
[2026-01-27 00:00:15] 2026-01-27 04:59:15,581 | INFO     | chi2: 0.15896986102976812
[2026-01-27 00:00:15] 2026-01-27 04:59:15,581 | INFO     | current memory leak: 0.75 B/s (using 1373 data points, chi2=0.16)
[2026-01-27 00:00:15] 2026-01-27 04:59:15,590 | INFO     | could have reported an average CPU frequency of 2600 MHz (51 samples)
[2026-01-27 00:00:15] 2026-01-27 04:59:15,590 | INFO     | ..............................
[2026-01-27 00:00:15] 2026-01-27 04:59:15,590 | INFO     | . Timing measurements:
[2026-01-27 00:00:15] 2026-01-27 04:59:15,590 | INFO     | . get job = 1 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,590 | INFO     | . initial setup = 72 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | . payload setup = 79 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | . stage-in = 1 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | . payload execution = 85958 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | . stage-out = 15 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | . log creation = 2 s
[2026-01-27 00:00:15] 2026-01-27 04:59:15,591 | INFO     | ..............................
[2026-01-27 00:00:15] 2026-01-27 04:59:16,400 | INFO     | time since job start (86093s) is within the limit (349056.0s)
[2026-01-27 00:00:15] 2026-01-27 04:59:16,487 | INFO     | 
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | job summary report
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | --------------------------------------------------
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | PanDA job id: 6983771450
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | task id: 48310670
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | errors: (none)
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | pilot state: finished 
[2026-01-27 00:00:15] 2026-01-27 04:59:16,488 | INFO     | transexitcode: 0
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | exeerrorcode: 0
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | exeerrordiag: 
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | exitcode: 0
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | exitmsg: OK
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | cpuconsumptiontime: 46215 s
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | nevents: 400
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | neventsw: 0
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | pid: 3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:16,489 | INFO     | pgrp: 3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | corecount: 8
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | event service: False
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | sizes: {0: 2283101, 1: 2283702, 2: 2283786, 4: 2283814, 5: 2283814, 6: 2266702, 7: 2266702, 8: 2284459, 9: 2284487, 21: 2284515, 86040: 2343078, 86044: 2343357, 86
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | --------------------------------------------------
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | 
[2026-01-27 00:00:15] 2026-01-27 04:59:16,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-27 00:00:15] 2026-01-27 04:59:16,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:00:15] 2026-01-27 04:59:16,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:00:15] 2026-01-27 04:59:16,538 | INFO     | job 6983771450 has completed (purged errors)
[2026-01-27 00:00:15] 2026-01-27 04:59:16,538 | INFO     | overall cleanup function is called
[2026-01-27 00:00:15] 2026-01-27 04:59:17,596 | INFO     | --- collectZombieJob: --- 10, [3458714]
[2026-01-27 00:00:15] 2026-01-27 04:59:17,596 | INFO     | zombie collector waiting for pid 3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:17,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:00:15] 2026-01-27 04:59:17,597 | INFO     | collected zombie processes
[2026-01-27 00:00:15] 2026-01-27 04:59:17,597 | INFO     | will attempt to kill all subprocesses of pid=3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:26,235 | INFO     | PID=3433736 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 00:00:15] 2026-01-27 04:59:26,235 | INFO     | .. there are 43 such processes running
[2026-01-27 00:00:15] 2026-01-27 04:59:26,308 | INFO     | process IDs to be killed: [3458714] (in reverse order)
[2026-01-27 00:00:15] 2026-01-27 04:59:26,857 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:00:15] 2026-01-27 04:59:26,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:00:15] 2026-01-27 04:59:26,893 | INFO     | did not find any defunct processes belonging to 3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:27,127 | INFO     | did not find any defunct processes belonging to 3458714
[2026-01-27 00:00:15] 2026-01-27 04:59:27,128 | INFO     | ready for new job
[2026-01-27 00:00:15] 2026-01-27 04:59:27,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:00:15] 2026-01-27 04:59:27,191 | INFO     | **************************************
[2026-01-27 00:00:15] 2026-01-27 04:59:27,191 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:00:15] 2026-01-27 04:59:27,191 | INFO     | **************************************
[2026-01-27 00:00:15] 2026-01-27 04:59:27,191 | INFO     | 
[2026-01-27 00:00:15] 2026-01-27 04:59:27,333 | INFO     | architecture information:
[2026-01-27 00:00:15] 2026-01-27 04:59:27,338 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:00:15] 2026-01-27 04:59:27,556 | INFO     | cat /etc/os-release:
[2026-01-27 00:00:15] NAME="CentOS Linux"
[2026-01-27 00:00:15] VERSION="7 (Core)"
[2026-01-27 00:00:15] ID="centos"
[2026-01-27 00:00:15] ID_LIKE="rhel fedora"
[2026-01-27 00:00:15] VERSION_ID="7"
[2026-01-27 00:00:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:00:15] ANSI_COLOR="0;31"
[2026-01-27 00:00:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:00:15] HOME_URL="https://www.centos.org/"
[2026-01-27 00:00:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:00:15] 
[2026-01-27 00:00:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:00:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:00:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:00:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:00:15] 
[2026-01-27 00:00:15] 2026-01-27 04:59:27,557 | INFO     | **************************************
[2026-01-27 00:00:15] 2026-01-27 04:59:28,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-27 00:00:15] 2026-01-27 04:59:28,287 | INFO     | sufficient remaining disk space (73595355136 B)
[2026-01-27 00:00:15] 2026-01-27 04:59:28,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:00:15] 2026-01-27 04:59:28,287 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:00:15] 2026-01-27 04:59:28,287 | INFO     | update_server=False
[2026-01-27 00:00:15] 2026-01-27 04:59:28,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:00:15] 2026-01-27 04:59:28,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:00:15] 2026-01-27 04:59:28,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:00:15] 2026-01-27 04:59:28,459 | INFO     | aborting loop
[2026-01-27 00:00:15] 2026-01-27 04:59:28,989 | INFO     | all data control threads have been joined
[2026-01-27 00:00:15] 2026-01-27 04:59:29,293 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:29,402 | INFO     | all payload control threads have been joined
[2026-01-27 00:00:15] 2026-01-27 04:59:29,467 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:29,665 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:29,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:00:15] 2026-01-27 04:59:29,720 | INFO     | all job control threads have been joined
[2026-01-27 00:00:15] 2026-01-27 04:59:30,003 | INFO     | [data] control thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,074 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:00:15] 2026-01-27 04:59:30,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,340 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,435 | INFO     | [payload] control thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,492 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,493 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,493 | INFO     | [job] validate thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,739 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:30,760 | INFO     | [job] control thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:31,165 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:31,747 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:32,317 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:00:15] 2026-01-27 04:59:58,990 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:00:15] 2026-01-27 05:00:00,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918716852032)>', '<ExcThread(monitor, started 139918442776320)>']
[2026-01-27 00:00:15] 2026-01-27 05:00:06,004 | INFO     | all workflow threads have been joined
[2026-01-27 00:00:15] 2026-01-27 05:00:06,006 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:00:15] 2026-01-27 05:00:06,006 | INFO     | traces error code: 0
[2026-01-27 00:00:15] 2026-01-27 05:00:06,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:00:15] 2026-01-27 05:00:09,809 | INFO     | PID=3433736 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:00:15] 2026-01-27 05:00:09,809 | INFO     | .. there are 43 such processes running
[2026-01-27 00:00:15] 2026-01-27 05:00:09,810 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:00:15] 2026-01-27 05:00:09,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:00:15] 2026-01-27 05:00:09,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:00:15] 2026-01-27 05:00:09,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:00:15] 2026-01-27 05:00:09,810 | INFO     | [monitor] control thread has ended
[2026-01-27 00:00:15] 2026-01-27 05:00:12,129 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:00:15] 2026-01-27 05:00:12,190 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:00:15] 2026-01-27 05:00:12,213 [wrapper] pilotpid: 3433736
[2026-01-27 00:00:15] 2026-01-27 05:00:12,229 [wrapper] Pilot exit status: 0
[2026-01-27 00:00:15] 2026-01-27 05:00:12,487 [wrapper] pandaids: 6983771450
[2026-01-27 00:00:15] 2026-01-27 05:00:13,458 [wrapper] cleanup supervisor_pilot 1056404 3433737
[2026-01-27 00:00:15] 2026-01-27 05:00:13,535 [wrapper] Test setup, not cleaning
[2026-01-27 00:00:15] 2026-01-27 05:00:13,569 [wrapper] apfmon messages muted
[2026-01-27 00:00:15] 2026-01-27 05:00:13,604 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:00:15] 2026-01-27 05:00:13,654 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:00:15]  *** Error codes and diagnostics ***
[2026-01-27 00:00:15]     "exeErrorCode": 0,
[2026-01-27 00:00:15]     "exeErrorDiag": "",
[2026-01-27 00:00:15]     "pilotErrorCode": 0,
[2026-01-27 00:00:15]     "pilotErrorDiag": "",
[2026-01-27 00:00:15]  *** Listing of results directory ***
[2026-01-27 00:00:15] total 681016
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-27 00:00:15] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:00:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:01 run_atlas
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:01 job.xml
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas 494540007 Jan 26 00:01 EVNT.48310665._000151.pool.root.1
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:01 start_atlas.sh
[2026-01-27 00:00:15] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:01 shared
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas    597768 Jan 26 00:01 input.tar.gz
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:01 boinc_lockfile
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas      2522 Jan 26 00:01 pandaJob.out
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas        57 Jan 26 00:01 setup.sh.local
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas       439 Jan 26 00:04 workernode_map.json
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   1004246 Jan 26 00:04 agis_schedconf.cvmfs.json
[2026-01-27 00:00:15] drwx------. 5 boincer umatlas      4096 Jan 26 00:04 pilot3
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas 181033825 Jan 26 23:56 HITS.48310670._010664.pool.root.1
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas       531 Jan 26 23:56 boinc_task_state.xml
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas      6659 Jan 26 23:57 init_data.xml
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas      1048 Jan 26 23:58 memory_monitor_summary.json
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   1516246 Jan 26 23:58 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   1187576 Jan 26 23:59 log.48310670._010664.job.log.tgz.1
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas      6392 Jan 26 23:59 heartbeat.json
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 00:00 boinc_mmap_file
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas        95 Jan 27 00:00 pilot_heartbeat.json
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas       823 Jan 27 00:00 pilotlog.txt
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas        28 Jan 27 00:00 wrapper_checkpoint.txt
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   7736978 Jan 27 00:00 log.48310670._010664.job.log.1
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas       357 Jan 27 00:00 output.list
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas       620 Jan 27 00:00 runtime_log
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   8939520 Jan 27 00:00 result.tar.gz
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas      9327 Jan 27 00:00 runtime_log.err
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas       656 Jan 27 00:00 eEyKDmIKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmq61KDmx2FNqm.diag
[2026-01-27 00:00:15] -rw-r--r--. 1 boincer umatlas     21302 Jan 27 00:00 stderr.txt
[2026-01-27 00:00:15] HITS file was successfully produced:
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas 181033825 Jan 26 23:56 shared/HITS.pool.root.1
[2026-01-27 00:00:15]  *** Contents of shared directory: ***
[2026-01-27 00:00:15] total 669084
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas 494540007 Jan 26 00:01 ATLAS.root_0
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:01 start_atlas.sh
[2026-01-27 00:00:15] -rw-r--r--. 2 boincer umatlas    597768 Jan 26 00:01 input.tar.gz
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas 181033825 Jan 26 23:56 HITS.pool.root.1
[2026-01-27 00:00:15] -rw-------. 1 boincer umatlas   8939520 Jan 27 00:00 result.tar.gz
00:00:16 (3418725): run_atlas exited; CPU time 49659.747767
00:00:16 (3418725): called boinc_finish(0)

</stderr_txt>
]]>

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