Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:00 (17457): wrapper (7.7.26015): starting
14:26:00 (17457): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 14:26:00] Arguments: --nthreads 8
[2026-01-26 14:26:00] Threads: 8
[2026-01-26 14:26:00] Checking for CVMFS
[2026-01-26 14:26:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 14:26:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 14:26:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 14:26:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 14:26:01] 2.11.2.0 5913 59935 133196 155548 0 54 17068790 25165824 899 130560 0 21479198 99.802 16371568 2570 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 14:26:01] CVMFS is ok
[2026-01-26 14:26:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 14:26:01] Checking for apptainer binary...
[2026-01-26 14:26:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 14:26:01] Running /usr/bin/apptainer --version
[2026-01-26 14:26:01] apptainer version 1.3.2-1.el7
[2026-01-26 14:26:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 14:26:02] cg-vwn443.simple-grid.lan
[2026-01-26 14:26:02] apptainer works
[2026-01-26 14:26:02] Set ATHENA_PROC_NUMBER=8
[2026-01-26 14:26:02] Set ATHENA_CORE_NUMBER=8
[2026-01-26 14:26:02] Starting ATLAS job with PandaID=6983449168
[2026-01-26 14:26:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:59:06]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:59:06] 2026-01-26 17:58:23,017 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,020 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6983449168/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,020 | INFO     | extracted standard info from prmon json
[2026-01-26 18:59:06] 2026-01-26 17:58:23,020 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:59:06] 2026-01-26 17:58:23,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:59:06] 2026-01-26 17:58:23,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:59:06] 2026-01-26 17:58:23,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:59:06] 2026-01-26 17:58:23,027 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:59:06] 2026-01-26 17:58:23,027 | INFO     | sum of square deviations: 5902093918.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,030 | INFO     | sum of deviations: -49586513320.99999
[2026-01-26 18:59:06] 2026-01-26 17:58:23,030 | INFO     | mean x: 1769442122.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,030 | INFO     | mean y: 2525542.853932584
[2026-01-26 18:59:06] 2026-01-26 17:58:23,030 | INFO     | intersect: 14868514897.192007
[2026-01-26 18:59:06] 2026-01-26 17:58:23,031 | INFO     | chi2: 2.5221987074541006
[2026-01-26 18:59:06] 2026-01-26 17:58:23,031 | INFO     | sum of square deviations: 5576683165.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,042 | INFO     | sum of deviations: -30589364481.500015
[2026-01-26 18:59:06] 2026-01-26 17:58:23,042 | INFO     | mean x: 1769441969.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,042 | INFO     | mean y: 2534318.3396946564
[2026-01-26 18:59:06] 2026-01-26 17:58:23,043 | INFO     | intersect: 9708322459.353054
[2026-01-26 18:59:06] 2026-01-26 17:58:23,043 | INFO     | chi2: 1.73726094605331
[2026-01-26 18:59:06] 2026-01-26 17:58:23,043 | INFO     | current chi2=1.73726094605331 (change=31.12117055174865 %)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,044 | INFO     | sum of square deviations: 5263458688.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,046 | INFO     | sum of deviations: -29798165231.999992
[2026-01-26 18:59:06] 2026-01-26 17:58:23,046 | INFO     | mean x: 1769441817.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,047 | INFO     | mean y: 2534703.6031128406
[2026-01-26 18:59:06] 2026-01-26 17:58:23,047 | INFO     | intersect: 10019924932.500507
[2026-01-26 18:59:06] 2026-01-26 17:58:23,047 | INFO     | chi2: 1.735650241875779
[2026-01-26 18:59:06] 2026-01-26 17:58:23,047 | INFO     | current chi2=1.735650241875779 (change=0.09271515492189136 %)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,047 | INFO     | right removable region: 256
[2026-01-26 18:59:06] 2026-01-26 17:58:23,048 | INFO     | sum of square deviations: 5576683165.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,051 | INFO     | sum of deviations: -90407274273.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,051 | INFO     | mean x: 1769442274.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,051 | INFO     | mean y: 2544507.171755725
[2026-01-26 18:59:06] 2026-01-26 17:58:23,051 | INFO     | intersect: 28688135614.71397
[2026-01-26 18:59:06] 2026-01-26 17:58:23,051 | INFO     | chi2: 1.0579097222102858
[2026-01-26 18:59:06] 2026-01-26 17:58:23,052 | INFO     | current chi2=1.0579097222102858 (change=58.056051686818265 %)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,052 | INFO     | sum of square deviations: 5263458688.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,055 | INFO     | sum of deviations: -85378341096.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,055 | INFO     | mean x: 1769442427.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,055 | INFO     | mean y: 2542037.5097276266
[2026-01-26 18:59:06] 2026-01-26 17:58:23,055 | INFO     | intersect: 28704592920.24292
[2026-01-26 18:59:06] 2026-01-26 17:58:23,055 | INFO     | chi2: 1.0464358482041434
[2026-01-26 18:59:06] 2026-01-26 17:58:23,056 | INFO     | current chi2=1.0464358482041434 (change=1.0845796919391293 %)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,056 | INFO     | left removable region: 20
[2026-01-26 18:59:06] 2026-01-26 17:58:23,056 | INFO     | sum of square deviations: 4075741535.0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,058 | INFO     | sum of deviations: -48107177890.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,058 | INFO     | mean x: 1769442396.5
[2026-01-26 18:59:06] 2026-01-26 17:58:23,058 | INFO     | mean y: 2542995.504237288
[2026-01-26 18:59:06] 2026-01-26 17:58:23,059 | INFO     | intersect: 20887792809.417706
[2026-01-26 18:59:06] 2026-01-26 17:58:23,059 | INFO     | chi2: 0.21310376424865146
[2026-01-26 18:59:06] 2026-01-26 17:58:23,059 | INFO     | current memory leak: -11.80 B/s (using 236 data points, chi2=0.21)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | ..............................
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | . Timing measurements:
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | . get job = 0 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | . initial setup = 8 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,060 | INFO     | . payload setup = 9 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,061 | INFO     | . stage-in = 0 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,061 | INFO     | . payload execution = 16293 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,061 | INFO     | . stage-out = 3 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,061 | INFO     | . log creation = 1 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,061 | INFO     | ..............................
[2026-01-26 18:59:06] 2026-01-26 17:58:23,357 | INFO     | 
[2026-01-26 18:59:06] 2026-01-26 17:58:23,357 | INFO     | job summary report
[2026-01-26 18:59:06] 2026-01-26 17:58:23,357 | INFO     | --------------------------------------------------
[2026-01-26 18:59:06] 2026-01-26 17:58:23,357 | INFO     | PanDA job id: 6983449168
[2026-01-26 18:59:06] 2026-01-26 17:58:23,357 | INFO     | task id: 48298567
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | errors: (none)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | pilot state: finished 
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | transexitcode: 0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | exeerrorcode: 0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | exeerrordiag: 
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | exitcode: 0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | exitmsg: OK
[2026-01-26 18:59:06] 2026-01-26 17:58:23,358 | INFO     | cpuconsumptiontime: 72541 s
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | nevents: 400
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | neventsw: 0
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | pid: 25843
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | pgrp: 25843
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | corecount: 8
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | event service: False
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | sizes: {0: 2283930, 1: 2284391, 2: 2284391, 16305: 2315958, 16306: 2315957, 16311: 2325011, 16313: 2325195, 16314: 2325389}
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | --------------------------------------------------
[2026-01-26 18:59:06] 2026-01-26 17:58:23,359 | INFO     | 
[2026-01-26 18:59:06] 2026-01-26 17:58:23,360 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-26 18:59:06] 2026-01-26 17:58:23,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:59:06] 2026-01-26 17:58:23,660 | INFO     | job 6983449168 has completed (purged errors)
[2026-01-26 18:59:06] 2026-01-26 17:58:23,660 | INFO     | overall cleanup function is called
[2026-01-26 18:59:06] 2026-01-26 17:58:24,668 | INFO     | --- collectZombieJob: --- 10, [25843]
[2026-01-26 18:59:06] 2026-01-26 17:58:24,668 | INFO     | zombie collector waiting for pid 25843
[2026-01-26 18:59:06] 2026-01-26 17:58:24,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:59:06] 2026-01-26 17:58:24,668 | INFO     | collected zombie processes
[2026-01-26 18:59:06] 2026-01-26 17:58:24,668 | INFO     | will attempt to kill all subprocesses of pid=25843
[2026-01-26 18:59:06] 2026-01-26 17:58:24,745 | INFO     | process IDs to be killed: [25843] (in reverse order)
[2026-01-26 18:59:06] 2026-01-26 17:58:25,680 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:59:06] 2026-01-26 17:58:25,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:59:06] 2026-01-26 17:58:25,688 | INFO     | did not find any defunct processes belonging to 25843
[2026-01-26 18:59:06] 2026-01-26 17:58:25,690 | INFO     | did not find any defunct processes belonging to 25843
[2026-01-26 18:59:06] 2026-01-26 17:58:25,690 | INFO     | ready for new job
[2026-01-26 18:59:06] 2026-01-26 17:58:25,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:59:06] 2026-01-26 17:58:25,693 | INFO     | **************************************
[2026-01-26 18:59:06] 2026-01-26 17:58:25,693 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:59:06] 2026-01-26 17:58:25,693 | INFO     | **************************************
[2026-01-26 18:59:06] 2026-01-26 17:58:25,693 | INFO     | 
[2026-01-26 18:59:06] 2026-01-26 17:58:25,694 | INFO     | pilot is running in a VM
[2026-01-26 18:59:06] 2026-01-26 17:58:25,694 | INFO     | architecture information:
[2026-01-26 18:59:06] 2026-01-26 17:58:25,704 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:59:06] 2026-01-26 17:58:26,015 | INFO     | cat /etc/os-release:
[2026-01-26 18:59:06] NAME="CentOS Linux"
[2026-01-26 18:59:06] VERSION="7 (Core)"
[2026-01-26 18:59:06] ID="centos"
[2026-01-26 18:59:06] ID_LIKE="rhel fedora"
[2026-01-26 18:59:06] VERSION_ID="7"
[2026-01-26 18:59:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:59:06] ANSI_COLOR="0;31"
[2026-01-26 18:59:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:59:06] HOME_URL="https://www.centos.org/"
[2026-01-26 18:59:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:59:06] 
[2026-01-26 18:59:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:59:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:59:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:59:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:59:06] 
[2026-01-26 18:59:06] 2026-01-26 17:58:26,016 | INFO     | **************************************
[2026-01-26 18:59:06] 2026-01-26 17:58:26,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-26 18:59:06] 2026-01-26 17:58:26,790 | INFO     | sufficient remaining disk space (496651730944 B)
[2026-01-26 18:59:06] 2026-01-26 17:58:26,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:59:06] 2026-01-26 17:58:26,790 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:59:06] 2026-01-26 17:58:26,790 | INFO     | update_server=False
[2026-01-26 18:59:06] 2026-01-26 17:58:26,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:59:06] 2026-01-26 17:58:26,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:59:06] 2026-01-26 17:58:27,231 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 18:59:06] 2026-01-26 17:58:27,231 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 18:59:06] 2026-01-26 17:58:27,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:59:06] 2026-01-26 17:58:27,231 | INFO     | will abort loop
[2026-01-26 18:59:06] 2026-01-26 17:58:27,797 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:27,888 | INFO     | all data control threads have been joined
[2026-01-26 18:59:06] 2026-01-26 17:58:27,940 | INFO     | all payload control threads have been joined
[2026-01-26 18:59:06] 2026-01-26 17:58:28,000 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,135 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:59:06] 2026-01-26 17:58:28,230 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,237 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,318 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,414 | INFO     | all job control threads have been joined
[2026-01-26 18:59:06] 2026-01-26 17:58:28,557 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:59:06] 2026-01-26 17:58:28,754 | INFO     | [job] validate thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,799 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,803 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,843 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,894 | INFO     | [data] control thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:28,946 | INFO     | [payload] control thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:29,216 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:29,420 | INFO     | [job] control thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:32,688 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:59:06] 2026-01-26 17:58:55,265 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:59:06] 2026-01-26 17:58:55,692 | INFO     | PID=21436 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 18:59:06] 2026-01-26 17:58:55,692 | INFO     | .. there are 2 such processes running
[2026-01-26 18:59:06] 2026-01-26 17:58:55,693 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:59:06] 2026-01-26 17:58:55,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:59:06] 2026-01-26 17:58:55,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:59:06] 2026-01-26 17:58:57,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002907510592)>', '<ExcThread(monitor, started 140002168137472)>']
[2026-01-26 18:59:06] 2026-01-26 17:58:57,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:59:06] 2026-01-26 17:58:57,705 | INFO     | [monitor] control thread has ended
[2026-01-26 18:59:06] 2026-01-26 17:59:02,363 | INFO     | all workflow threads have been joined
[2026-01-26 18:59:06] 2026-01-26 17:59:02,363 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:59:06] 2026-01-26 17:59:02,363 | INFO     | traces error code: 0
[2026-01-26 18:59:06] 2026-01-26 17:59:02,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:59:06] 2026-01-26 17:59:02,826 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:59:06] 2026-01-26 17:59:02,904 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:59:06] 2026-01-26 17:59:02,970 [wrapper] pilotpid: 21436
[2026-01-26 18:59:06] 2026-01-26 17:59:03,061 [wrapper] Pilot exit status: 0
[2026-01-26 18:59:06] 2026-01-26 17:59:03,203 [wrapper] pandaids: 6983449168
[2026-01-26 18:59:06] 2026-01-26 17:59:03,239 [wrapper] cleanup supervisor_pilot 14950 21437
[2026-01-26 18:59:06] 2026-01-26 17:59:03,256 [wrapper] Test setup, not cleaning
[2026-01-26 18:59:06] 2026-01-26 17:59:03,261 [wrapper] apfmon messages muted
[2026-01-26 18:59:06] 2026-01-26 17:59:03,357 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:59:06] 2026-01-26 17:59:03,460 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:59:06]  *** Error codes and diagnostics ***
[2026-01-26 18:59:06]     "exeErrorCode": 0,
[2026-01-26 18:59:06]     "exeErrorDiag": "",
[2026-01-26 18:59:06]     "pilotErrorCode": 0,
[2026-01-26 18:59:06]     "pilotErrorDiag": "",
[2026-01-26 18:59:06]  *** Listing of results directory ***
[2026-01-26 18:59:06] total 420348
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc      5111 Jan 25 21:48 queuedata.json
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-26 18:59:06] -rwx------. 1 boinc boinc     36322 Jan 25 21:48 runpilot2-wrapper.sh
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc       100 Jan 26 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:59:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 14:26 run_atlas
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc       105 Jan 26 14:26 job.xml
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc      6390 Jan 26 14:26 init_data.xml
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc 254241161 Jan 26 14:26 EVNT.48298565._000010.pool.root.1
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc     15845 Jan 26 14:26 start_atlas.sh
[2026-01-26 18:59:06] drwxrwx--x. 2 boinc boinc        68 Jan 26 14:26 shared
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc    597769 Jan 26 14:26 input.tar.gz
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc         0 Jan 26 14:26 boinc_lockfile
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc      2613 Jan 26 14:26 pandaJob.out
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc   1002197 Jan 26 14:26 agis_schedconf.cvmfs.json
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc       415 Jan 26 14:26 workernode_map.json
[2026-01-26 18:59:06] drwx------. 5 boinc boinc      4096 Jan 26 14:26 pilot3
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc 166721591 Jan 26 18:56 HITS.48298567._000238.pool.root.1
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc       530 Jan 26 18:57 boinc_task_state.xml
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc      1020 Jan 26 18:58 memory_monitor_summary.json
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc   1516246 Jan 26 18:58 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc    489671 Jan 26 18:58 log.48298567._000238.job.log.tgz.1
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc      6312 Jan 26 18:58 heartbeat.json
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc        95 Jan 26 18:58 pilot_heartbeat.json
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc      8192 Jan 26 18:58 boinc_mmap_file
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc        28 Jan 26 18:58 wrapper_checkpoint.txt
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc      5066 Jan 26 18:59 pilotlog.txt
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc   2284146 Jan 26 18:59 log.48298567._000238.job.log.1
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc       357 Jan 26 18:59 output.list
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc       620 Jan 26 18:59 runtime_log
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc   2795520 Jan 26 18:59 result.tar.gz
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc      8816 Jan 26 18:59 runtime_log.err
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc       655 Jan 26 18:59 Oi8NDmJDM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5g1KDm3SEhWn.diag
[2026-01-26 18:59:06] -rw-r--r--. 1 boinc boinc     20719 Jan 26 18:59 stderr.txt
[2026-01-26 18:59:06] HITS file was successfully produced:
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc 166721591 Jan 26 18:56 shared/HITS.pool.root.1
[2026-01-26 18:59:06]  *** Contents of shared directory: ***
[2026-01-26 18:59:06] total 414432
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc 254241161 Jan 26 14:26 ATLAS.root_0
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc     15845 Jan 26 14:26 start_atlas.sh
[2026-01-26 18:59:06] -rw-r--r--. 2 boinc boinc    597769 Jan 26 14:26 input.tar.gz
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc 166721591 Jan 26 18:56 HITS.pool.root.1
[2026-01-26 18:59:06] -rw-------. 1 boinc boinc   2795520 Jan 26 18:59 result.tar.gz
18:59:07 (17457): run_atlas exited; CPU time 72701.537446
18:59:07 (17457): called boinc_finish(0)

</stderr_txt>
]]>

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