Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:46:20 (2599402): wrapper (7.7.26015): starting
00:46:20 (2599402): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 00:46:20] Arguments: --nthreads 9
[2026-01-26 00:46:20] Threads: 9
[2026-01-26 00:46:20] Checking for CVMFS
[2026-01-26 00:46:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:46:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:46:20] 2.13.3.0 388524 40977 96784 155534 3 50 30175038 32515073 0 16776704 0 15536501 99.976 1498039 31269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 00:46:20] CVMFS is ok
[2026-01-26 00:46:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:46:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:46:20] Further information can be found at the LHC@home message board.
[2026-01-26 00:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:46:20] Checking for apptainer binary...
[2026-01-26 00:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:46:20] Running /usr/bin/apptainer --version
[2026-01-26 00:46:21] apptainer version 1.4.5-2.el9
[2026-01-26 00:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:46:21] c-205-38.aglt2.org
[2026-01-26 00:46:21] apptainer works
[2026-01-26 00:46:21] Set ATHENA_PROC_NUMBER=9
[2026-01-26 00:46:21] Set ATHENA_CORE_NUMBER=9
[2026-01-26 00:46:21] Starting ATLAS job with PandaID=6983016825
[2026-01-26 00:46:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 01:37:38]  *** The last 200 lines of the pilot log: ***
[2026-01-26 01:37:38]  direct_access_wan=False
[2026-01-26 01:37:38]  domain=
[2026-01-26 01:37:38]  filesize=321319
[2026-01-26 01:37:38]  filetype=log
[2026-01-26 01:37:38]  guid=99994d86-3851-4634-a862-9424c36d3088
[2026-01-26 01:37:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 01:37:38]  is_altstaged=None
[2026-01-26 01:37:38]  is_tar=False
[2026-01-26 01:37:38]  lfn=log.48317931._001478.job.log.tgz.1
[2026-01-26 01:37:38]  mtime=0
[2026-01-26 01:37:38]  protocol_id=None
[2026-01-26 01:37:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 01:37:38]  replicas=None
[2026-01-26 01:37:38]  scope=mc23_13p6TeV
[2026-01-26 01:37:38]  status=None
[2026-01-26 01:37:38]  status_code=0
[2026-01-26 01:37:38]  storage_token=
[2026-01-26 01:37:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983016825/log.48317931._001478.job.log.tgz.1
[2026-01-26 01:37:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9e/log.48317931._001478.job.log.tgz.1
[2026-01-26 01:37:38]  workdir=None
[2026-01-26 01:37:38] ]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,666 | INFO     | transferring file log.48317931._001478.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983016825/log.48317931._001478.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 01:37:38] 2026-01-26 06:36:43,666 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983016825/log.48317931._001478.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317931._001478.job
[2026-01-26 01:37:38] 2026-01-26 06:36:43,674 | INFO     | adding to output.list: log.48317931._001478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9e/log.48317931._001478.job.log.tg
[2026-01-26 01:37:38] 2026-01-26 06:36:43,675 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 01:37:38] 2026-01-26 06:36:43,675 | INFO     | summary of transferred files:
[2026-01-26 01:37:38] 2026-01-26 06:36:43,675 | INFO     |  -- lfn=log.48317931._001478.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 01:37:38] 2026-01-26 06:36:43,675 | INFO     | stage-out finished correctly
[2026-01-26 01:37:38] 2026-01-26 06:36:43,713 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 01:37:38] 2026-01-26 06:36:43,750 | INFO     | job 6983016825 has state=finished
[2026-01-26 01:37:38] 2026-01-26 06:36:43,750 | INFO     | preparing for final server update for job 6983016825 in state='finished'
[2026-01-26 01:37:38] 2026-01-26 06:36:43,750 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983016825/jobReport.json
[2026-01-26 01:37:38] 2026-01-26 06:36:43,751 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 01:37:38] 2026-01-26 06:36:43,751 | INFO     | this job has now completed (state=finished)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,752 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,752 | INFO     | log transfer has been attempted: DONE
[2026-01-26 01:37:38] 2026-01-26 06:36:43,752 | INFO     | job 6983016825 has finished - writing final server update
[2026-01-26 01:37:38] 2026-01-26 06:36:43,752 | INFO     | total number of processed events: 400 (read)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,753 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983016825/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,754 | INFO     | extracted standard info from prmon json
[2026-01-26 01:37:38] 2026-01-26 06:36:43,754 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 01:37:38] 2026-01-26 06:36:43,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 01:37:38] 2026-01-26 06:36:43,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 01:37:38] 2026-01-26 06:36:43,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | fitting pss+swap vs Time
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | sum of square deviations: 24640462.0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | sum of deviations: -5468170784.0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | mean x: 1769407991.0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | mean y: 2859323.1627906975
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | intersect: 392666969328.9871
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | chi2: 0.07185341672216336
[2026-01-26 01:37:38] 2026-01-26 06:36:43,755 | INFO     | current memory leak: -221.92 B/s (using 43 data points, chi2=0.07)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | could have reported an average CPU frequency of 2663 MHz (5 samples)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | ..............................
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . Timing measurements:
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . get job = 0 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . initial setup = 4 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . payload setup = 2 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . stage-in = 0 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . payload execution = 2996 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . stage-out = 0 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | . log creation = 0 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,756 | INFO     | ..............................
[2026-01-26 01:37:38] 2026-01-26 06:36:43,795 | INFO     | 
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | job summary report
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | --------------------------------------------------
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | PanDA job id: 6983016825
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | task id: 48317931
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | errors: (none)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | pilot state: finished 
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | transexitcode: 0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | exeerrorcode: 0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | exeerrordiag: 
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | exitcode: 0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | exitmsg: OK
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | cpuconsumptiontime: 24471 s
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | nevents: 400
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | neventsw: 0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | pid: 2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | pgrp: 2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | corecount: 9
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | event service: False
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | sizes: {0: 2284174, 11: 2284174, 3002: 2309653, 3003: 2318707, 3004: 2318877}
[2026-01-26 01:37:38] 2026-01-26 06:36:43,796 | INFO     | --------------------------------------------------
[2026-01-26 01:37:38] 2026-01-26 06:36:43,797 | INFO     | 
[2026-01-26 01:37:38] 2026-01-26 06:36:43,797 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | job 6983016825 has completed (purged errors)
[2026-01-26 01:37:38] 2026-01-26 06:36:43,806 | INFO     | overall cleanup function is called
[2026-01-26 01:37:38] 2026-01-26 06:36:44,813 | INFO     | --- collectZombieJob: --- 10, [2607483]
[2026-01-26 01:37:38] 2026-01-26 06:36:44,813 | INFO     | zombie collector waiting for pid 2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:44,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 01:37:38] 2026-01-26 06:36:44,813 | INFO     | collected zombie processes
[2026-01-26 01:37:38] 2026-01-26 06:36:44,813 | INFO     | will attempt to kill all subprocesses of pid=2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:44,874 | INFO     | process IDs to be killed: [2607483] (in reverse order)
[2026-01-26 01:37:38] 2026-01-26 06:36:44,894 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 01:37:38] 2026-01-26 06:36:44,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 01:37:38] 2026-01-26 06:36:44,895 | INFO     | did not find any defunct processes belonging to 2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:44,897 | INFO     | did not find any defunct processes belonging to 2607483
[2026-01-26 01:37:38] 2026-01-26 06:36:44,897 | INFO     | ready for new job
[2026-01-26 01:37:38] 2026-01-26 06:36:44,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 01:37:38] 2026-01-26 06:36:44,898 | INFO     | **************************************
[2026-01-26 01:37:38] 2026-01-26 06:36:44,898 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 01:37:38] 2026-01-26 06:36:44,898 | INFO     | **************************************
[2026-01-26 01:37:38] 2026-01-26 06:36:44,898 | INFO     | 
[2026-01-26 01:37:38] 2026-01-26 06:36:44,899 | INFO     | architecture information:
[2026-01-26 01:37:38] 2026-01-26 06:36:44,899 | INFO     | executing command: cat /etc/os-release
[2026-01-26 01:37:38] 2026-01-26 06:36:44,904 | INFO     | cat /etc/os-release:
[2026-01-26 01:37:38] NAME="CentOS Linux"
[2026-01-26 01:37:38] VERSION="7 (Core)"
[2026-01-26 01:37:38] ID="centos"
[2026-01-26 01:37:38] ID_LIKE="rhel fedora"
[2026-01-26 01:37:38] VERSION_ID="7"
[2026-01-26 01:37:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 01:37:38] ANSI_COLOR="0;31"
[2026-01-26 01:37:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 01:37:38] HOME_URL="https://www.centos.org/"
[2026-01-26 01:37:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 01:37:38] 
[2026-01-26 01:37:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 01:37:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 01:37:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 01:37:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 01:37:38] 
[2026-01-26 01:37:38] 2026-01-26 06:36:44,905 | INFO     | **************************************
[2026-01-26 01:37:38] 2026-01-26 06:36:45,407 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 01:37:38] 2026-01-26 06:36:45,413 | INFO     | sufficient remaining disk space (20267925504 B)
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | INFO     | update_server=False
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 01:37:38] 2026-01-26 06:36:45,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 01:37:38] 2026-01-26 06:36:45,537 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 01:37:38] 2026-01-26 06:36:45,537 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 01:37:38] 2026-01-26 06:36:45,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 01:37:38] 2026-01-26 06:36:45,537 | INFO     | will abort loop
[2026-01-26 01:37:38] 2026-01-26 06:36:46,141 | INFO     | all data control threads have been joined
[2026-01-26 01:37:38] 2026-01-26 06:36:46,419 | INFO     | [job] retrieve thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:46,419 | INFO     | [job] queue monitor thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:46,543 | INFO     | [job] job monitor thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:46,582 | INFO     | all payload control threads have been joined
[2026-01-26 01:37:38] 2026-01-26 06:36:46,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 01:37:38] 2026-01-26 06:36:46,933 | INFO     | all job control threads have been joined
[2026-01-26 01:37:38] 2026-01-26 06:36:47,146 | INFO     | [data] control thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,404 | INFO     | [job] validate thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,517 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,563 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,588 | INFO     | [payload] control thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,592 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,698 | INFO     | [data] copytool_in thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,938 | INFO     | [job] control thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:47,941 | INFO     | [payload] validate_post thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:48,011 | INFO     | [payload] failed_post thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:48,724 | INFO     | [data] copytool_out thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:49,420 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:36:55,986 | INFO     | job.realtimelogging is not enabled
[2026-01-26 01:37:38] 2026-01-26 06:36:56,992 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 01:37:38] 2026-01-26 06:37:15,511 | INFO     | PID=2603116 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 01:37:38] 2026-01-26 06:37:15,512 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 01:37:38] 2026-01-26 06:37:15,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 01:37:38] 2026-01-26 06:37:15,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 01:37:38] 2026-01-26 06:37:32,709 | INFO     | [monitor] cgroup control has ended
[2026-01-26 01:37:38] 2026-01-26 06:37:33,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632119682880)>', '<ExcThread(monitor, started 139631626528512)>']
[2026-01-26 01:37:38] 2026-01-26 06:37:33,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 01:37:38] 2026-01-26 06:37:33,602 | INFO     | [monitor] control thread has ended
[2026-01-26 01:37:38] 2026-01-26 06:37:38,341 | INFO     | all workflow threads have been joined
[2026-01-26 01:37:38] 2026-01-26 06:37:38,341 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 01:37:38] 2026-01-26 06:37:38,341 | INFO     | traces error code: 0
[2026-01-26 01:37:38] 2026-01-26 06:37:38,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 01:37:38] 2026-01-26 06:37:38,401 [wrapper] ==== pilot stdout END ====
[2026-01-26 01:37:38] 2026-01-26 06:37:38,402 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 01:37:38] 2026-01-26 06:37:38,404 [wrapper] pilotpid: 2603116
[2026-01-26 01:37:38] 2026-01-26 06:37:38,405 [wrapper] Pilot exit status: 0
[2026-01-26 01:37:38] 2026-01-26 06:37:38,410 [wrapper] pandaids: 6983016825
[2026-01-26 01:37:38] 2026-01-26 06:37:38,423 [wrapper] cleanup supervisor_pilot 2633561 2603117
[2026-01-26 01:37:38] 2026-01-26 06:37:38,425 [wrapper] Test setup, not cleaning
[2026-01-26 01:37:38] 2026-01-26 06:37:38,426 [wrapper] apfmon messages muted
[2026-01-26 01:37:38] 2026-01-26 06:37:38,428 [wrapper] ==== wrapper stdout END ====
[2026-01-26 01:37:38] 2026-01-26 06:37:38,429 [wrapper] ==== wrapper stderr END ====
[2026-01-26 01:37:38]  *** Error codes and diagnostics ***
[2026-01-26 01:37:38]     "exeErrorCode": 0,
[2026-01-26 01:37:38]     "exeErrorDiag": "",
[2026-01-26 01:37:38]     "pilotErrorCode": 0,
[2026-01-26 01:37:38]     "pilotErrorDiag": "",
[2026-01-26 01:37:38]  *** Listing of results directory ***
[2026-01-26 01:37:38] total 668668
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 09:11 pilot3.tar.gz
[2026-01-26 01:37:38] -rwx------. 1 boincer umatlas     36322 Jan 25 09:14 runpilot2-wrapper.sh
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 09:18 queuedata.json
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 01:37:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:46 run_atlas
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:46 job.xml
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas 497346877 Jan 26 00:46 EVNT.48317929._000030.pool.root.1
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:46 start_atlas.sh
[2026-01-26 01:37:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:46 shared
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas    597753 Jan 26 00:46 input.tar.gz
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:46 boinc_lockfile
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas      2507 Jan 26 00:46 pandaJob.out
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas   1004254 Jan 26 00:46 agis_schedconf.cvmfs.json
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas   1516246 Jan 26 00:46 agis_ddmendpoints.agis.ALL.json
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas       440 Jan 26 00:46 workernode_map.json
[2026-01-26 01:37:38] drwx------. 5 boincer umatlas      4096 Jan 26 00:46 pilot3
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas      6530 Jan 26 01:27 init_data.xml
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas 181868469 Jan 26 01:36 HITS.48317931._001478.pool.root.1
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas       531 Jan 26 01:36 boinc_task_state.xml
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas      1025 Jan 26 01:36 memory_monitor_summary.json
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas    321319 Jan 26 01:36 log.48317931._001478.job.log.tgz.1
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas      6368 Jan 26 01:36 heartbeat.json
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas        95 Jan 26 01:37 pilot_heartbeat.json
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas        27 Jan 26 01:37 wrapper_checkpoint.txt
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 01:37 boinc_mmap_file
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas      5002 Jan 26 01:37 pilotlog.txt
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas    461108 Jan 26 01:37 log.48317931._001478.job.log.1
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas       357 Jan 26 01:37 output.list
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas       620 Jan 26 01:37 runtime_log
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas    798720 Jan 26 01:37 result.tar.gz
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas      8816 Jan 26 01:37 runtime_log.err
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas       648 Jan 26 01:37 74eMDm63F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxA1KDm9Bs9Dn.diag
[2026-01-26 01:37:38] -rw-r--r--. 1 boincer umatlas     20999 Jan 26 01:37 stderr.txt
[2026-01-26 01:37:38] HITS file was successfully produced:
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas 181868469 Jan 26 01:36 shared/HITS.pool.root.1
[2026-01-26 01:37:38]  *** Contents of shared directory: ***
[2026-01-26 01:37:38] total 664684
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas 497346877 Jan 26 00:46 ATLAS.root_0
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:46 start_atlas.sh
[2026-01-26 01:37:38] -rw-r--r--. 2 boincer umatlas    597753 Jan 26 00:46 input.tar.gz
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas 181868469 Jan 26 01:36 HITS.pool.root.1
[2026-01-26 01:37:38] -rw-------. 1 boincer umatlas    798720 Jan 26 01:37 result.tar.gz
01:37:40 (2599402): run_atlas exited; CPU time 24479.076005
01:37:40 (2599402): called boinc_finish(0)

</stderr_txt>
]]>

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