Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:15 (1106868): wrapper (7.7.26015): starting
19:36:15 (1106868): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 19:36:15] Arguments: --nthreads 3
[2026-01-26 19:36:15] Threads: 3
[2026-01-26 19:36:15] Checking for CVMFS
[2026-01-26 19:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:36:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:36:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:36:15] 2.9.2.0 3955128 8726 87164 155556 2 49 16311237 36864000 0 130560 0 3845137 99.987 275404 5504 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 19:36:15] CVMFS is ok
[2026-01-26 19:36:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:36:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:36:15] Further information can be found at the LHC@home message board.
[2026-01-26 19:36:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:36:15] Checking for apptainer binary...
[2026-01-26 19:36:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:36:15] Running /usr/bin/apptainer --version
[2026-01-26 19:36:15] apptainer version 1.4.1-1.1
[2026-01-26 19:36:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:36:16] thA332
[2026-01-26 19:36:16] apptainer works
[2026-01-26 19:36:16] Set ATHENA_PROC_NUMBER=3
[2026-01-26 19:36:16] Set ATHENA_CORE_NUMBER=3
[2026-01-26 19:36:16] Starting ATLAS job with PandaID=6983328287
[2026-01-26 19:36:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:01:37]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:01:37] 2026-01-26 20:00:52,832 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:52,832 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:52,833 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:52,968 | INFO     | [data] control thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,080 | INFO     | all payload control threads have been joined
[2026-01-26 21:01:37] 2026-01-26 20:00:53,190 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,386 | INFO     | [job] validate thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,429 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,478 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,500 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,512 | INFO     | [job] control thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:53,637 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:54,047 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:54,086 | INFO     | [payload] control thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:54,808 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:00:54,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:01:37] 2026-01-26 20:00:58,874 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:01:02,500 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:01:37] 2026-01-26 20:01:03,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:01:37] 2026-01-26 20:01:21,432 | INFO     | 5069s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-26 21:01:37] 2026-01-26 20:01:22,490 | INFO     | PID=1110904 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:01:37] 2026-01-26 20:01:22,490 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:01:37] 2026-01-26 20:01:22,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:01:37] 2026-01-26 20:01:22,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:01:37] 2026-01-26 20:01:31,737 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:01:37] 2026-01-26 20:01:32,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674712393536)>', '<ExcThread(monitor, started 140673986582272)>']
[2026-01-26 21:01:37] 2026-01-26 20:01:32,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:01:37] 2026-01-26 20:01:32,540 | INFO     | [monitor] control thread has ended
[2026-01-26 21:01:37] 2026-01-26 20:01:37,335 | INFO     | all workflow threads have been joined
[2026-01-26 21:01:37] 2026-01-26 20:01:37,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:01:37] 2026-01-26 20:01:37,335 | INFO     | traces error code: 0
[2026-01-26 21:01:37] 2026-01-26 20:01:37,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:01:37] 2026-01-26 20:01:37,386 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:01:37] 2026-01-26 20:01:37,388 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:01:37] 2026-01-26 20:01:37,390 [wrapper] pilotpid: 1110904
[2026-01-26 21:01:37] 2026-01-26 20:01:37,393 [wrapper] Pilot exit status: 0
[2026-01-26 21:01:37] 2026-01-26 20:01:37,400 [wrapper] pandaids: 6983328287
[2026-01-26 21:01:37] 2026-01-26 20:01:37,416 [wrapper] cleanup supervisor_pilot 1120536 1110905
[2026-01-26 21:01:37] 2026-01-26 20:01:37,418 [wrapper] Test setup, not cleaning
[2026-01-26 21:01:37] 2026-01-26 20:01:37,421 [wrapper] apfmon messages muted
[2026-01-26 21:01:37] 2026-01-26 20:01:37,423 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:01:37] 2026-01-26 20:01:37,425 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:01:37]  *** Error codes and diagnostics ***
[2026-01-26 21:01:37]     "exeErrorCode": 0,
[2026-01-26 21:01:37]     "exeErrorDiag": "",
[2026-01-26 21:01:37]     "pilotErrorCode": 0,
[2026-01-26 21:01:37]     "pilotErrorDiag": "",
[2026-01-26 21:01:37]  *** Listing of results directory ***
[2026-01-26 21:01:37] total 672628
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 21:01:37] -rwx------ 1 boinc boinc     36322 Jan 25 19:52 runpilot2-wrapper.sh
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:56 queuedata.json
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:01:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:36 run_atlas
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:36 job.xml
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc 501300402 Jan 26 19:36 EVNT.48318032._000026.pool.root.1
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc    597767 Jan 26 19:36 input.tar.gz
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:36 start_atlas.sh
[2026-01-26 21:01:37] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:36 shared
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:36 boinc_setup_complete
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      6439 Jan 26 19:36 init_data.xml
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:36 boinc_lockfile
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      2532 Jan 26 19:36 pandaJob.out
[2026-01-26 21:01:37] -rw------- 1 boinc boinc   1006384 Jan 26 19:36 agis_schedconf.cvmfs.json
[2026-01-26 21:01:37] -rw------- 1 boinc boinc   1516246 Jan 26 19:36 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:01:37] -rw------- 1 boinc boinc       427 Jan 26 19:36 workernode_map.json
[2026-01-26 21:01:37] drwx------ 5 boinc boinc      4096 Jan 26 19:36 pilot3
[2026-01-26 21:01:37] -rw------- 1 boinc boinc 181552307 Jan 26 21:00 HITS.48318034._001263.pool.root.1
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc       530 Jan 26 21:00 boinc_task_state.xml
[2026-01-26 21:01:37] -rw------- 1 boinc boinc      1019 Jan 26 21:00 memory_monitor_summary.json
[2026-01-26 21:01:37] -rw------- 1 boinc boinc    256727 Jan 26 21:00 log.48318034._001263.job.log.tgz.1
[2026-01-26 21:01:37] -rw------- 1 boinc boinc        95 Jan 26 21:00 pilot_heartbeat.json
[2026-01-26 21:01:37] -rw------- 1 boinc boinc      6307 Jan 26 21:00 heartbeat.json
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:01 boinc_mmap_file
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc        27 Jan 26 21:01 wrapper_checkpoint.txt
[2026-01-26 21:01:37] -rw------- 1 boinc boinc      4935 Jan 26 21:01 pilotlog.txt
[2026-01-26 21:01:37] -rw------- 1 boinc boinc    741360 Jan 26 21:01 log.48318034._001263.job.log.1
[2026-01-26 21:01:37] -rw------- 1 boinc boinc       357 Jan 26 21:01 output.list
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:01 runtime_log
[2026-01-26 21:01:37] -rw------- 1 boinc boinc   1013760 Jan 26 21:01 result.tar.gz
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      8896 Jan 26 21:01 runtime_log.err
[2026-01-26 21:01:37] -rw------- 1 boinc boinc       657 Jan 26 21:01 AxOMDmfOK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPf1KDmhAjxCo.diag
[2026-01-26 21:01:37] -rw-r--r-- 1 boinc boinc      6767 Jan 26 21:01 stderr.txt
[2026-01-26 21:01:37] HITS file was successfully produced:
[2026-01-26 21:01:37] -rw------- 1 boinc boinc 181552307 Jan 26 21:00 shared/HITS.pool.root.1
[2026-01-26 21:01:37]  *** Contents of shared directory: ***
[2026-01-26 21:01:37] total 668452
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc 501300402 Jan 26 19:36 ATLAS.root_0
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc    597767 Jan 26 19:36 input.tar.gz
[2026-01-26 21:01:37] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:36 start_atlas.sh
[2026-01-26 21:01:37] -rw------- 1 boinc boinc 181552307 Jan 26 21:00 HITS.pool.root.1
[2026-01-26 21:01:37] -rw------- 1 boinc boinc   1013760 Jan 26 21:01 result.tar.gz
21:01:38 (1106868): run_atlas exited; CPU time 14556.005557
21:01:38 (1106868): called boinc_finish(0)

</stderr_txt>
]]>

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