Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:50:23 (2512521): wrapper (7.7.26015): starting
20:50:23 (2512521): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 20:50:23] Arguments: --nthreads 3
[2026-01-26 20:50:23] Threads: 3
[2026-01-26 20:50:23] Checking for CVMFS
[2026-01-26 20:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:50:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:50:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:50:23] 2.9.2.0 1096142 8715 83768 155560 3 49 21513731 36864001 0 130560 0 4019989 99.987 279795 6408 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 20:50:23] CVMFS is ok
[2026-01-26 20:50:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:50:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:50:23] Further information can be found at the LHC@home message board.
[2026-01-26 20:50:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:50:23] Checking for apptainer binary...
[2026-01-26 20:50:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:50:23] Running /usr/bin/apptainer --version
[2026-01-26 20:50:23] apptainer version 1.4.1-1.1
[2026-01-26 20:50:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:50:24] thA361a
[2026-01-26 20:50:24] apptainer works
[2026-01-26 20:50:24] Set ATHENA_PROC_NUMBER=3
[2026-01-26 20:50:24] Set ATHENA_CORE_NUMBER=3
[2026-01-26 20:50:24] Starting ATLAS job with PandaID=6983328222
[2026-01-26 20:50:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:15:51]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:15:51]  guid=04d3feef-2d21-40da-92ae-25271a008959
[2026-01-26 22:15:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 22:15:51]  is_altstaged=None
[2026-01-26 22:15:51]  is_tar=False
[2026-01-26 22:15:51]  lfn=log.48318034._001198.job.log.tgz.1
[2026-01-26 22:15:51]  mtime=0
[2026-01-26 22:15:51]  protocol_id=None
[2026-01-26 22:15:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 22:15:51]  replicas=None
[2026-01-26 22:15:51]  scope=mc23_13p6TeV
[2026-01-26 22:15:51]  status=None
[2026-01-26 22:15:51]  status_code=0
[2026-01-26 22:15:51]  storage_token=
[2026-01-26 22:15:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983328222/log.48318034._001198.job.log.tgz.1
[2026-01-26 22:15:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/3a/log.48318034._001198.job.log.tgz.1
[2026-01-26 22:15:51]  workdir=None
[2026-01-26 22:15:51] ]
[2026-01-26 22:15:51] 2026-01-26 21:15:18,930 | INFO     | transferring file log.48318034._001198.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983328222/log.48318034._001198.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 22:15:51] 2026-01-26 21:15:18,930 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983328222/log.48318034._001198.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0011
[2026-01-26 22:15:51] 2026-01-26 21:15:18,945 | INFO     | adding to output.list: log.48318034._001198.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/3a/log.48318034._001198.job.log.tg
[2026-01-26 22:15:51] 2026-01-26 21:15:18,945 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 22:15:51] 2026-01-26 21:15:18,945 | INFO     | summary of transferred files:
[2026-01-26 22:15:51] 2026-01-26 21:15:18,945 | INFO     |  -- lfn=log.48318034._001198.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 22:15:51] 2026-01-26 21:15:18,945 | INFO     | stage-out finished correctly
[2026-01-26 22:15:51] 2026-01-26 21:15:19,239 | INFO     | PID=2516558 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:15:51] 2026-01-26 21:15:20,097 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 22:15:51] 2026-01-26 21:15:20,128 | INFO     | job 6983328222 has state=finished
[2026-01-26 22:15:51] 2026-01-26 21:15:20,128 | INFO     | preparing for final server update for job 6983328222 in state='finished'
[2026-01-26 22:15:51] 2026-01-26 21:15:20,128 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983328222/jobReport.json
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | job 6983328222 has finished - writing final server update
[2026-01-26 22:15:51] 2026-01-26 21:15:20,130 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983328222/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | INFO     | extracted standard info from prmon json
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:15:51] 2026-01-26 21:15:20,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | sum of square deviations: 141539398.0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | sum of deviations: -11653400350.0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | mean x: 1769459674.0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | mean y: 2452511.6233766233
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | intersect: 145687839588.81363
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | chi2: 0.16414221389780137
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | current memory leak: -82.33 B/s (using 77 data points, chi2=0.16)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | could have reported an average CPU frequency of 3896 MHz (6 samples)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | ..............................
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | . Timing measurements:
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | . get job = 0 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,132 | INFO     | . initial setup = 3 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | . payload setup = 3 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | . stage-in = 0 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | . payload execution = 5067 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | . stage-out = 0 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | . log creation = 0 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,133 | INFO     | ..............................
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | 
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | job summary report
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | --------------------------------------------------
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | PanDA job id: 6983328222
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | task id: 48318034
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | errors: (none)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | pilot state: finished 
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | transexitcode: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | exeerrorcode: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,159 | INFO     | exeerrordiag: 
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | exitcode: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | exitmsg: OK
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | cpuconsumptiontime: 14610 s
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | nevents: 400
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | neventsw: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | pid: 2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | pgrp: 2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | corecount: 3
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | event service: False
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | sizes: {0: 2284204, 11: 2284204, 5073: 2310685, 5074: 2319689, 5075: 2319939}
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | --------------------------------------------------
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | 
[2026-01-26 22:15:51] 2026-01-26 21:15:20,160 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:15:51] 2026-01-26 21:15:20,173 | INFO     | job 6983328222 has completed (purged errors)
[2026-01-26 22:15:51] 2026-01-26 21:15:20,173 | INFO     | overall cleanup function is called
[2026-01-26 22:15:51] 2026-01-26 21:15:21,179 | INFO     | --- collectZombieJob: --- 10, [2520983]
[2026-01-26 22:15:51] 2026-01-26 21:15:21,180 | INFO     | zombie collector waiting for pid 2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:21,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:15:51] 2026-01-26 21:15:21,180 | INFO     | collected zombie processes
[2026-01-26 22:15:51] 2026-01-26 21:15:21,180 | INFO     | will attempt to kill all subprocesses of pid=2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:21,221 | INFO     | process IDs to be killed: [2520983] (in reverse order)
[2026-01-26 22:15:51] 2026-01-26 21:15:21,246 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:15:51] 2026-01-26 21:15:21,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:15:51] 2026-01-26 21:15:21,248 | INFO     | did not find any defunct processes belonging to 2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:21,249 | INFO     | did not find any defunct processes belonging to 2520983
[2026-01-26 22:15:51] 2026-01-26 21:15:21,249 | INFO     | ready for new job
[2026-01-26 22:15:51] 2026-01-26 21:15:21,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | **************************************
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | **************************************
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | 
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | architecture information:
[2026-01-26 22:15:51] 2026-01-26 21:15:21,250 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:15:51] 2026-01-26 21:15:21,259 | INFO     | cat /etc/os-release:
[2026-01-26 22:15:51] NAME="CentOS Linux"
[2026-01-26 22:15:51] VERSION="7 (Core)"
[2026-01-26 22:15:51] ID="centos"
[2026-01-26 22:15:51] ID_LIKE="rhel fedora"
[2026-01-26 22:15:51] VERSION_ID="7"
[2026-01-26 22:15:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:15:51] ANSI_COLOR="0;31"
[2026-01-26 22:15:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:15:51] HOME_URL="https://www.centos.org/"
[2026-01-26 22:15:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:15:51] 
[2026-01-26 22:15:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:15:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:15:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:15:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:15:51] 
[2026-01-26 22:15:51] 2026-01-26 21:15:21,259 | INFO     | **************************************
[2026-01-26 22:15:51] 2026-01-26 21:15:21,763 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 22:15:51] 2026-01-26 21:15:21,775 | INFO     | sufficient remaining disk space (279471718400 B)
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | INFO     | update_server=False
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:15:51] 2026-01-26 21:15:21,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:15:51] 2026-01-26 21:15:21,891 | INFO     | all payload control threads have been joined
[2026-01-26 22:15:51] 2026-01-26 21:15:21,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:15:51] 2026-01-26 21:15:22,140 | INFO     | all data control threads have been joined
[2026-01-26 22:15:51] 2026-01-26 21:15:22,181 | INFO     | all job control threads have been joined
[2026-01-26 22:15:51] 2026-01-26 21:15:22,781 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:22,782 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:22,873 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:22,896 | INFO     | [payload] control thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,113 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,146 | INFO     | [data] control thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,186 | INFO     | [job] control thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,266 | INFO     | [job] validate thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,273 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,319 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,487 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:23,988 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:24,152 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:24,242 | WARNING  | process 2520983 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 22:15:51] 2026-01-26 21:15:24,269 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:15:51] 2026-01-26 21:15:24,305 | INFO     | number of running child processes to parent process 2520983: 1
[2026-01-26 22:15:51] 2026-01-26 21:15:24,305 | INFO     | maximum number of monitored processes: 6
[2026-01-26 22:15:51] 2026-01-26 21:15:24,305 | INFO     | aborting job monitoring since job object (job id=6983328222) has expired
[2026-01-26 22:15:51] 2026-01-26 21:15:24,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:15:51] 2026-01-26 21:15:24,305 | INFO     | will abort loop
[2026-01-26 22:15:51] 2026-01-26 21:15:25,310 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:25,783 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:32,038 | INFO     | job.realtimelogging is not enabled
[2026-01-26 22:15:51] 2026-01-26 21:15:33,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:15:51] 2026-01-26 21:15:40,049 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:15:51] 2026-01-26 21:15:41,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175047087936)>', '<ExcThread(monitor, started 140174554023680)>']
[2026-01-26 22:15:51] 2026-01-26 21:15:46,476 | INFO     | all workflow threads have been joined
[2026-01-26 22:15:51] 2026-01-26 21:15:46,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:15:51] 2026-01-26 21:15:46,477 | INFO     | traces error code: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:46,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | INFO     | PID=2516558 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:15:51] 2026-01-26 21:15:51,369 | INFO     | [monitor] control thread has ended
[2026-01-26 22:15:51] 2026-01-26 21:15:51,414 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:15:51] 2026-01-26 21:15:51,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:15:51] 2026-01-26 21:15:51,419 [wrapper] pilotpid: 2516558
[2026-01-26 22:15:51] 2026-01-26 21:15:51,421 [wrapper] Pilot exit status: 0
[2026-01-26 22:15:51] 2026-01-26 21:15:51,429 [wrapper] pandaids: 6983328222
[2026-01-26 22:15:51] 2026-01-26 21:15:51,446 [wrapper] cleanup supervisor_pilot 2526025 2516559
[2026-01-26 22:15:51] 2026-01-26 21:15:51,448 [wrapper] Test setup, not cleaning
[2026-01-26 22:15:51] 2026-01-26 21:15:51,451 [wrapper] apfmon messages muted
[2026-01-26 22:15:51] 2026-01-26 21:15:51,453 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:15:51] 2026-01-26 21:15:51,456 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:15:51]  *** Error codes and diagnostics ***
[2026-01-26 22:15:51]     "exeErrorCode": 0,
[2026-01-26 22:15:51]     "exeErrorDiag": "",
[2026-01-26 22:15:51]     "pilotErrorCode": 0,
[2026-01-26 22:15:51]     "pilotErrorDiag": "",
[2026-01-26 22:15:51]  *** Listing of results directory ***
[2026-01-26 22:15:51] total 667080
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc    621528 Jan 14 12:27 pilot3.tar.gz
[2026-01-26 22:15:51] -rwx------ 1 boinc boinc     36322 Jan 25 19:52 runpilot2-wrapper.sh
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:56 queuedata.json
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc       100 Jan 26 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:15:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 20:50 run_atlas
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc       105 Jan 26 20:50 job.xml
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc 494966877 Jan 26 20:50 EVNT.48318032._000024.pool.root.1
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc    634118 Jan 26 20:50 input.tar.gz
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:50 start_atlas.sh
[2026-01-26 22:15:51] drwxrwx--x 2 boinc boinc      4096 Jan 26 20:50 shared
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:50 boinc_setup_complete
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc      6448 Jan 26 20:50 init_data.xml
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:50 boinc_lockfile
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc      2533 Jan 26 20:50 pandaJob.out
[2026-01-26 22:15:51] -rw------- 1 boinc boinc   1006449 Jan 26 20:50 agis_schedconf.cvmfs.json
[2026-01-26 22:15:51] -rw------- 1 boinc boinc   1516246 Jan 26 20:50 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:15:51] -rw------- 1 boinc boinc       424 Jan 26 20:50 workernode_map.json
[2026-01-26 22:15:51] drwx------ 5 boinc boinc      4096 Jan 26 20:50 pilot3
[2026-01-26 22:15:51] -rw------- 1 boinc boinc        95 Jan 26 22:14 pilot_heartbeat.json
[2026-01-26 22:15:51] -rw------- 1 boinc boinc 181981768 Jan 26 22:15 HITS.48318034._001198.pool.root.1
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc       530 Jan 26 22:15 boinc_task_state.xml
[2026-01-26 22:15:51] -rw------- 1 boinc boinc      1014 Jan 26 22:15 memory_monitor_summary.json
[2026-01-26 22:15:51] -rw------- 1 boinc boinc    293393 Jan 26 22:15 log.48318034._001198.job.log.tgz.1
[2026-01-26 22:15:51] -rw------- 1 boinc boinc      6298 Jan 26 22:15 heartbeat.json
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc      8192 Jan 26 22:15 boinc_mmap_file
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc        27 Jan 26 22:15 wrapper_checkpoint.txt
[2026-01-26 22:15:51] -rw------- 1 boinc boinc       747 Jan 26 22:15 pilotlog.txt
[2026-01-26 22:15:51] -rw------- 1 boinc boinc    771379 Jan 26 22:15 log.48318034._001198.job.log.1
[2026-01-26 22:15:51] -rw------- 1 boinc boinc       357 Jan 26 22:15 output.list
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc       620 Jan 26 22:15 runtime_log
[2026-01-26 22:15:51] -rw------- 1 boinc boinc   1085440 Jan 26 22:15 result.tar.gz
[2026-01-26 22:15:51] -rw------- 1 boinc boinc       658 Jan 26 22:15 wc5NDmVOK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUF8KDmRLUzXn.diag
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc      8901 Jan 26 22:15 runtime_log.err
[2026-01-26 22:15:51] -rw-r--r-- 1 boinc boinc     21470 Jan 26 22:15 stderr.txt
[2026-01-26 22:15:51] HITS file was successfully produced:
[2026-01-26 22:15:51] -rw------- 1 boinc boinc 181981768 Jan 26 22:15 shared/HITS.pool.root.1
[2026-01-26 22:15:51]  *** Contents of shared directory: ***
[2026-01-26 22:15:51] total 662792
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc 494966877 Jan 26 20:50 ATLAS.root_0
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc    634118 Jan 26 20:50 input.tar.gz
[2026-01-26 22:15:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:50 start_atlas.sh
[2026-01-26 22:15:51] -rw------- 1 boinc boinc 181981768 Jan 26 22:15 HITS.pool.root.1
[2026-01-26 22:15:51] -rw------- 1 boinc boinc   1085440 Jan 26 22:15 result.tar.gz
22:15:52 (2512521): run_atlas exited; CPU time 14633.693577
22:15:52 (2512521): called boinc_finish(0)

</stderr_txt>
]]>

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