Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:45 (1605374): wrapper (7.7.26015): starting
14:26:45 (1605374): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 14:26:45] Arguments: --nthreads 2
[2026-01-26 14:26:45] Threads: 2
[2026-01-26 14:26:45] Checking for CVMFS
[2026-01-26 14:26:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 14:26:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 14:26:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 14:26:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 14:26:46] 2.9.2.0 765468 8505 67288 155548 2 49 28610158 36864000 0 130560 0 2549247 99.980 270055 6794 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 14:26:46] CVMFS is ok
[2026-01-26 14:26:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 14:26:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 14:26:46] Further information can be found at the LHC@home message board.
[2026-01-26 14:26:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 14:26:46] Checking for apptainer binary...
[2026-01-26 14:26:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 14:26:46] Running /usr/bin/apptainer --version
[2026-01-26 14:26:46] apptainer version 1.4.1-1.1
[2026-01-26 14:26:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 14:26:46] magicA244
[2026-01-26 14:26:46] apptainer works
[2026-01-26 14:26:46] Set ATHENA_PROC_NUMBER=2
[2026-01-26 14:26:46] Set ATHENA_CORE_NUMBER=2
[2026-01-26 14:26:46] Starting ATLAS job with PandaID=6983305183
[2026-01-26 14:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 16:41:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 16:41:24] 2026-01-26 15:40:38,166 | INFO     | zombie collector waiting for pid 1613808
[2026-01-26 16:41:24] 2026-01-26 15:40:38,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 16:41:24] 2026-01-26 15:40:38,167 | INFO     | collected zombie processes
[2026-01-26 16:41:24] 2026-01-26 15:40:38,167 | INFO     | will attempt to kill all subprocesses of pid=1613808
[2026-01-26 16:41:24] 2026-01-26 15:40:38,198 | INFO     | process IDs to be killed: [1613808] (in reverse order)
[2026-01-26 16:41:24] 2026-01-26 15:40:38,219 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 16:41:24] 2026-01-26 15:40:38,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 16:41:24] 2026-01-26 15:40:38,220 | INFO     | did not find any defunct processes belonging to 1613808
[2026-01-26 16:41:24] 2026-01-26 15:40:38,220 | INFO     | did not find any defunct processes belonging to 1613808
[2026-01-26 16:41:24] 2026-01-26 15:40:38,220 | INFO     | ready for new job
[2026-01-26 16:41:24] 2026-01-26 15:40:38,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | **************************************
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | **************************************
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | 
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | architecture information:
[2026-01-26 16:41:24] 2026-01-26 15:40:38,221 | INFO     | executing command: cat /etc/os-release
[2026-01-26 16:41:24] 2026-01-26 15:40:38,230 | INFO     | cat /etc/os-release:
[2026-01-26 16:41:24] NAME="CentOS Linux"
[2026-01-26 16:41:24] VERSION="7 (Core)"
[2026-01-26 16:41:24] ID="centos"
[2026-01-26 16:41:24] ID_LIKE="rhel fedora"
[2026-01-26 16:41:24] VERSION_ID="7"
[2026-01-26 16:41:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 16:41:24] ANSI_COLOR="0;31"
[2026-01-26 16:41:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 16:41:24] HOME_URL="https://www.centos.org/"
[2026-01-26 16:41:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 16:41:24] 
[2026-01-26 16:41:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 16:41:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 16:41:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 16:41:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 16:41:24] 
[2026-01-26 16:41:24] 2026-01-26 15:40:38,230 | INFO     | **************************************
[2026-01-26 16:41:24] 2026-01-26 15:40:38,733 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | INFO     | sufficient remaining disk space (493925433344 B)
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | INFO     | update_server=False
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:41:24] 2026-01-26 15:40:38,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 16:41:24] 2026-01-26 15:40:38,857 | INFO     | all job control threads have been joined
[2026-01-26 16:41:24] 2026-01-26 15:40:39,139 | INFO     | all payload control threads have been joined
[2026-01-26 16:41:24] 2026-01-26 15:40:39,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 16:41:24] 2026-01-26 15:40:39,462 | INFO     | all data control threads have been joined
[2026-01-26 16:41:24] 2026-01-26 15:40:39,751 | INFO     | [job] retrieve thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:39,752 | INFO     | [job] queue monitor thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:39,863 | INFO     | [job] control thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:39,973 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:40,141 | INFO     | [payload] control thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:40,204 | INFO     | [payload] validate_post thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:40,468 | INFO     | [data] control thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:40,748 | INFO     | job.realtimelogging is not enabled
[2026-01-26 16:41:24] 2026-01-26 15:40:40,925 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:40,981 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:41,023 | INFO     | [job] validate thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:41,147 | INFO     | [data] copytool_in thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:41,173 | INFO     | [payload] failed_post thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:41,304 | INFO     | [data] copytool_out thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:41,412 | WARNING  | process 1613808 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 16:41:24] 2026-01-26 15:40:41,432 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 16:41:24] 2026-01-26 15:40:41,458 | INFO     | number of running child processes to parent process 1613808: 1
[2026-01-26 16:41:24] 2026-01-26 15:40:41,458 | INFO     | maximum number of monitored processes: 6
[2026-01-26 16:41:24] 2026-01-26 15:40:41,458 | INFO     | aborting job monitoring since job object (job id=6983305183) has expired
[2026-01-26 16:41:24] 2026-01-26 15:40:41,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:41:24] 2026-01-26 15:40:41,459 | INFO     | will abort loop
[2026-01-26 16:41:24] 2026-01-26 15:40:41,754 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:42,464 | INFO     | [job] job monitor thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:40:42,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 16:41:24] 2026-01-26 15:41:09,754 | INFO     | PID=1609401 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 16:41:24] 2026-01-26 15:41:09,754 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 16:41:24] 2026-01-26 15:41:09,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 16:41:24] 2026-01-26 15:41:09,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 16:41:24] 2026-01-26 15:41:19,188 | INFO     | [monitor] cgroup control has ended
[2026-01-26 16:41:24] 2026-01-26 15:41:19,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659623065408)>', '<ExcThread(monitor, started 139658914690816)>']
[2026-01-26 16:41:24] 2026-01-26 15:41:19,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 16:41:24] 2026-01-26 15:41:19,807 | INFO     | [monitor] control thread has ended
[2026-01-26 16:41:24] 2026-01-26 15:41:24,298 | INFO     | all workflow threads have been joined
[2026-01-26 16:41:24] 2026-01-26 15:41:24,299 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 16:41:24] 2026-01-26 15:41:24,300 | INFO     | traces error code: 0
[2026-01-26 16:41:24] 2026-01-26 15:41:24,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 16:41:24] 2026-01-26 15:41:24,342 [wrapper] ==== pilot stdout END ====
[2026-01-26 16:41:24] 2026-01-26 15:41:24,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 16:41:24] 2026-01-26 15:41:24,347 [wrapper] pilotpid: 1609401
[2026-01-26 16:41:24] 2026-01-26 15:41:24,350 [wrapper] Pilot exit status: 0
[2026-01-26 16:41:24] 2026-01-26 15:41:24,356 [wrapper] pandaids: 6983305183
[2026-01-26 16:41:24] 2026-01-26 15:41:24,369 [wrapper] cleanup supervisor_pilot 1618777 1609402
[2026-01-26 16:41:24] 2026-01-26 15:41:24,371 [wrapper] Test setup, not cleaning
[2026-01-26 16:41:24] 2026-01-26 15:41:24,373 [wrapper] apfmon messages muted
[2026-01-26 16:41:24] 2026-01-26 15:41:24,375 [wrapper] ==== wrapper stdout END ====
[2026-01-26 16:41:24] 2026-01-26 15:41:24,377 [wrapper] ==== wrapper stderr END ====
[2026-01-26 16:41:24]  *** Error codes and diagnostics ***
[2026-01-26 16:41:24]     "exeErrorCode": 0,
[2026-01-26 16:41:24]     "exeErrorDiag": "",
[2026-01-26 16:41:24]     "pilotErrorCode": 0,
[2026-01-26 16:41:24]     "pilotErrorDiag": "",
[2026-01-26 16:41:24]  *** Listing of results directory ***
[2026-01-26 16:41:24] total 675384
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 16:41:24] -rwx------ 1 boinc boinc     36322 Jan 25 19:50 runpilot2-wrapper.sh
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:53 queuedata.json
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc       100 Jan 26 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 16:41:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 14:26 run_atlas
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc       105 Jan 26 14:26 job.xml
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc 501759829 Jan 26 14:26 EVNT.48318040._000022.pool.root.1
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc    597774 Jan 26 14:26 input.tar.gz
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc     15845 Jan 26 14:26 start_atlas.sh
[2026-01-26 16:41:24] drwxrwx--x 2 boinc boinc      4096 Jan 26 14:26 shared
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc         0 Jan 26 14:26 boinc_setup_complete
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc      6209 Jan 26 14:26 init_data.xml
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc         0 Jan 26 14:26 boinc_lockfile
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc      2533 Jan 26 14:26 pandaJob.out
[2026-01-26 16:41:24] -rw------- 1 boinc boinc   1002197 Jan 26 14:27 agis_schedconf.cvmfs.json
[2026-01-26 16:41:24] -rw------- 1 boinc boinc   1516246 Jan 26 14:27 agis_ddmendpoints.agis.ALL.json
[2026-01-26 16:41:24] -rw------- 1 boinc boinc       428 Jan 26 14:27 workernode_map.json
[2026-01-26 16:41:24] drwx------ 5 boinc boinc      4096 Jan 26 14:27 pilot3
[2026-01-26 16:41:24] -rw------- 1 boinc boinc 182994650 Jan 26 16:40 HITS.48318042._001096.pool.root.1
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc       530 Jan 26 16:40 boinc_task_state.xml
[2026-01-26 16:41:24] -rw------- 1 boinc boinc      1015 Jan 26 16:40 memory_monitor_summary.json
[2026-01-26 16:41:24] -rw------- 1 boinc boinc    311838 Jan 26 16:40 log.48318042._001096.job.log.tgz.1
[2026-01-26 16:41:24] -rw------- 1 boinc boinc      6313 Jan 26 16:40 heartbeat.json
[2026-01-26 16:41:24] -rw------- 1 boinc boinc        95 Jan 26 16:41 pilot_heartbeat.json
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc      8192 Jan 26 16:41 boinc_mmap_file
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc        27 Jan 26 16:41 wrapper_checkpoint.txt
[2026-01-26 16:41:24] -rw------- 1 boinc boinc      5344 Jan 26 16:41 pilotlog.txt
[2026-01-26 16:41:24] -rw------- 1 boinc boinc   1146694 Jan 26 16:41 log.48318042._001096.job.log.1
[2026-01-26 16:41:24] -rw------- 1 boinc boinc       357 Jan 26 16:41 output.list
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc       620 Jan 26 16:41 runtime_log
[2026-01-26 16:41:24] -rw------- 1 boinc boinc   1474560 Jan 26 16:41 result.tar.gz
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc      8911 Jan 26 16:41 runtime_log.err
[2026-01-26 16:41:24] -rw------- 1 boinc boinc       660 Jan 26 16:41 18CMDmUNK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvb1KDmwoCDKm.diag
[2026-01-26 16:41:24] -rw-r--r-- 1 boinc boinc     11241 Jan 26 16:41 stderr.txt
[2026-01-26 16:41:24] HITS file was successfully produced:
[2026-01-26 16:41:24] -rw------- 1 boinc boinc 182994650 Jan 26 16:40 shared/HITS.pool.root.1
[2026-01-26 16:41:24]  *** Contents of shared directory: ***
[2026-01-26 16:41:24] total 670756
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc 501759829 Jan 26 14:26 ATLAS.root_0
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc    597774 Jan 26 14:26 input.tar.gz
[2026-01-26 16:41:24] -rw-r--r-- 2 boinc boinc     15845 Jan 26 14:26 start_atlas.sh
[2026-01-26 16:41:24] -rw------- 1 boinc boinc 182994650 Jan 26 16:40 HITS.pool.root.1
[2026-01-26 16:41:24] -rw------- 1 boinc boinc   1474560 Jan 26 16:41 result.tar.gz
16:41:25 (1605374): run_atlas exited; CPU time 15653.658524
16:41:25 (1605374): called boinc_finish(0)

</stderr_txt>
]]>

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