Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:24:01 (678829): wrapper (7.7.26015): starting
10:24:01 (678829): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 10:24:01] Arguments: --nthreads 2
[2026-01-26 10:24:01] Threads: 2
[2026-01-26 10:24:01] Checking for CVMFS
[2026-01-26 10:24:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 10:24:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 10:24:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 10:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 10:24:05] 2.11.2.0 75129 8078 70056 155541 3 50 3690856 4096001 9230 130560 0 15784190 99.978 485499 1150 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 10:24:05] CVMFS is ok
[2026-01-26 10:24:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 10:24:05] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 10:24:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 10:24:05] Further information can be found at the LHC@home message board.
[2026-01-26 10:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 10:24:05] Checking for apptainer binary...
[2026-01-26 10:24:05] apptainer is not installed, using version from CVMFS
[2026-01-26 10:24:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 10:24:05] Enceladus
[2026-01-26 10:24:05] apptainer works
[2026-01-26 10:24:05] Set ATHENA_PROC_NUMBER=2
[2026-01-26 10:24:05] Set ATHENA_CORE_NUMBER=2
[2026-01-26 10:24:05] Starting ATLAS job with PandaID=6983306245
[2026-01-26 10:24:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:38:03]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:38:03] 2026-01-26 13:37:28,335 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:38:03] 2026-01-26 13:37:28,335 | INFO     | job 6983306245 has finished - writing final server update
[2026-01-26 14:38:03] 2026-01-26 13:37:28,335 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,357 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6983306245/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,357 | INFO     | extracted standard info from prmon json
[2026-01-26 14:38:03] 2026-01-26 13:37:28,358 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:38:03] 2026-01-26 13:37:28,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:38:03] 2026-01-26 13:37:28,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:38:03] 2026-01-26 13:37:28,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:38:03] 2026-01-26 13:37:28,361 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:38:03] 2026-01-26 13:37:28,362 | INFO     | sum of square deviations: 4787066500.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,363 | INFO     | sum of deviations: -46698237191.99999
[2026-01-26 14:38:03] 2026-01-26 13:37:28,363 | INFO     | mean x: 1769427056.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,364 | INFO     | mean y: 2253715.7269076305
[2026-01-26 14:38:03] 2026-01-26 13:37:28,364 | INFO     | intersect: 17263163785.605873
[2026-01-26 14:38:03] 2026-01-26 13:37:28,364 | INFO     | chi2: 1.2621676625212892
[2026-01-26 14:38:03] 2026-01-26 13:37:28,364 | INFO     | sum of square deviations: 4504437945.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | sum of deviations: -45546475970.49999
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | mean x: 1769426903.5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | mean y: 2254337.3155737706
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | intersect: 17893756212.98831
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | chi2: 1.2585327565721285
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | current chi2=1.2585327565721285 (change=0.28798915208298687 %)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,366 | INFO     | right removable region: 243
[2026-01-26 14:38:03] 2026-01-26 13:37:28,367 | INFO     | sum of square deviations: 4504437945.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,368 | INFO     | sum of deviations: -60089590554.999985
[2026-01-26 14:38:03] 2026-01-26 13:37:28,368 | INFO     | mean x: 1769427208.5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,368 | INFO     | mean y: 2260757.7459016396
[2026-01-26 14:38:03] 2026-01-26 13:37:28,369 | INFO     | intersect: 23606572277.60226
[2026-01-26 14:38:03] 2026-01-26 13:37:28,369 | INFO     | chi2: 0.2180966420071027
[2026-01-26 14:38:03] 2026-01-26 13:37:28,369 | INFO     | current chi2=0.2180966420071027 (change=82.72046983271338 %)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,369 | INFO     | sum of square deviations: 4233158440.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | sum of deviations: -47336220332.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | mean x: 1769427361.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | mean y: 2253585.9246861925
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | intersect: 19788426158.7059
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | chi2: 0.15916308993357656
[2026-01-26 14:38:03] 2026-01-26 13:37:28,371 | INFO     | current chi2=0.15916308993357656 (change=27.021760413719186 %)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,372 | INFO     | sum of square deviations: 3972995422.5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,373 | INFO     | sum of deviations: -38184796134.5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,373 | INFO     | mean x: 1769427513.5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,373 | INFO     | mean y: 2248242.2863247865
[2026-01-26 14:38:03] 2026-01-26 13:37:28,373 | INFO     | intersect: 17008366219.45164
[2026-01-26 14:38:03] 2026-01-26 13:37:28,373 | INFO     | chi2: 0.12262032978155518
[2026-01-26 14:38:03] 2026-01-26 13:37:28,374 | INFO     | current chi2=0.12262032978155518 (change=22.959318122858598 %)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,374 | INFO     | left removable region: 30
[2026-01-26 14:38:03] 2026-01-26 13:37:28,374 | INFO     | sum of square deviations: 2996454322.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,375 | INFO     | sum of deviations: -19365189564.000004
[2026-01-26 14:38:03] 2026-01-26 13:37:28,375 | INFO     | mean x: 1769427788.0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,375 | INFO     | mean y: 2236905.676056338
[2026-01-26 14:38:03] 2026-01-26 13:37:28,375 | INFO     | intersect: 11437520361.476791
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | chi2: 0.08043082497644714
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | current memory leak: -6.46 B/s (using 213 data points, chi2=0.08)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | could have reported an average CPU frequency of 3715 MHz (12 samples)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | ..............................
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . Timing measurements:
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . get job = 0 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . initial setup = 3 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . payload setup = 4 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . stage-in = 0 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,376 | INFO     | . payload execution = 15155 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,377 | INFO     | . stage-out = 0 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,377 | INFO     | . log creation = 0 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,377 | INFO     | ..............................
[2026-01-26 14:38:03] 2026-01-26 13:37:28,728 | INFO     | 
[2026-01-26 14:38:03] 2026-01-26 13:37:28,728 | INFO     | job summary report
[2026-01-26 14:38:03] 2026-01-26 13:37:28,728 | INFO     | --------------------------------------------------
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | PanDA job id: 6983306245
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | task id: 48318042
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | errors: (none)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | pilot state: finished 
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | transexitcode: 0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | exeerrorcode: 0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | exeerrordiag: 
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | exitcode: 0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | exitmsg: OK
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | cpuconsumptiontime: 30098 s
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | nevents: 400
[2026-01-26 14:38:03] 2026-01-26 13:37:28,729 | INFO     | neventsw: 0
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | pid: 687472
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | pgrp: 687472
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | corecount: 2
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | event service: False
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | sizes: {0: 2284052, 1: 2284258, 11: 2284286, 15163: 2315523, 15164: 2324535, 15165: 2324913}
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | --------------------------------------------------
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | 
[2026-01-26 14:38:03] 2026-01-26 13:37:28,730 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:38:03] 2026-01-26 13:37:28,750 | INFO     | job 6983306245 has completed (purged errors)
[2026-01-26 14:38:03] 2026-01-26 13:37:28,750 | INFO     | overall cleanup function is called
[2026-01-26 14:38:03] 2026-01-26 13:37:29,760 | INFO     | --- collectZombieJob: --- 10, [687472]
[2026-01-26 14:38:03] 2026-01-26 13:37:29,760 | INFO     | zombie collector waiting for pid 687472
[2026-01-26 14:38:03] 2026-01-26 13:37:29,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:38:03] 2026-01-26 13:37:29,760 | INFO     | collected zombie processes
[2026-01-26 14:38:03] 2026-01-26 13:37:29,760 | INFO     | will attempt to kill all subprocesses of pid=687472
[2026-01-26 14:38:03] 2026-01-26 13:37:29,929 | INFO     | process IDs to be killed: [687472] (in reverse order)
[2026-01-26 14:38:03] 2026-01-26 13:37:29,992 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:38:03] 2026-01-26 13:37:29,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:38:03] 2026-01-26 13:37:29,997 | INFO     | did not find any defunct processes belonging to 687472
[2026-01-26 14:38:03] 2026-01-26 13:37:30,000 | INFO     | did not find any defunct processes belonging to 687472
[2026-01-26 14:38:03] 2026-01-26 13:37:30,001 | INFO     | ready for new job
[2026-01-26 14:38:03] 2026-01-26 13:37:30,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:38:03] 2026-01-26 13:37:30,002 | INFO     | **************************************
[2026-01-26 14:38:03] 2026-01-26 13:37:30,003 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:38:03] 2026-01-26 13:37:30,003 | INFO     | **************************************
[2026-01-26 14:38:03] 2026-01-26 13:37:30,003 | INFO     | 
[2026-01-26 14:38:03] 2026-01-26 13:37:30,022 | INFO     | architecture information:
[2026-01-26 14:38:03] 2026-01-26 13:37:30,022 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:38:03] 2026-01-26 13:37:30,035 | INFO     | cat /etc/os-release:
[2026-01-26 14:38:03] NAME="CentOS Linux"
[2026-01-26 14:38:03] VERSION="7 (Core)"
[2026-01-26 14:38:03] ID="centos"
[2026-01-26 14:38:03] ID_LIKE="rhel fedora"
[2026-01-26 14:38:03] VERSION_ID="7"
[2026-01-26 14:38:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:38:03] ANSI_COLOR="0;31"
[2026-01-26 14:38:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:38:03] HOME_URL="https://www.centos.org/"
[2026-01-26 14:38:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:38:03] 
[2026-01-26 14:38:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:38:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:38:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:38:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:38:03] 
[2026-01-26 14:38:03] 2026-01-26 13:37:30,035 | INFO     | **************************************
[2026-01-26 14:38:03] 2026-01-26 13:37:30,536 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | INFO     | sufficient remaining disk space (235990417408 B)
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | INFO     | update_server=False
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:38:03] 2026-01-26 13:37:30,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:38:03] 2026-01-26 13:37:30,712 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:38:03] 2026-01-26 13:37:30,752 | INFO     | all job control threads have been joined
[2026-01-26 14:38:03] 2026-01-26 13:37:31,044 | INFO     | all data control threads have been joined
[2026-01-26 14:38:03] 2026-01-26 13:37:31,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:38:03] 2026-01-26 13:37:31,478 | INFO     | aborting loop
[2026-01-26 14:38:03] 2026-01-26 13:37:31,553 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:31,576 | INFO     | all payload control threads have been joined
[2026-01-26 14:38:03] 2026-01-26 13:37:31,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:31,749 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:31,756 | INFO     | [job] control thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:31,937 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,048 | INFO     | [data] control thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,128 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,376 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,480 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,552 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,580 | INFO     | [payload] control thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:32,628 | INFO     | [job] validate thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:33,012 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:33,048 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:33,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:38:03] 2026-01-26 13:37:34,468 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:34,552 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:38:03] 2026-01-26 13:37:56,894 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:38:03] 2026-01-26 13:37:58,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602096318272)>', '<ExcThread(monitor, started 140601509009152)>']
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | INFO     | PID=682958 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | INFO     | .. there are 11 such processes running
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:38:03] 2026-01-26 13:38:01,062 | INFO     | [monitor] control thread has ended
[2026-01-26 14:38:03] 2026-01-26 13:38:03,196 | INFO     | all workflow threads have been joined
[2026-01-26 14:38:03] 2026-01-26 13:38:03,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:38:03] 2026-01-26 13:38:03,197 | INFO     | traces error code: 0
[2026-01-26 14:38:03] 2026-01-26 13:38:03,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:38:03] 2026-01-26 13:38:03,273 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:38:03] 2026-01-26 13:38:03,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:38:03] 2026-01-26 13:38:03,278 [wrapper] pilotpid: 682958
[2026-01-26 14:38:03] 2026-01-26 13:38:03,279 [wrapper] Pilot exit status: 0
[2026-01-26 14:38:03] 2026-01-26 13:38:03,289 [wrapper] pandaids: 6983306245
[2026-01-26 14:38:03] 2026-01-26 13:38:03,324 [wrapper] cleanup supervisor_pilot  815995 682959
[2026-01-26 14:38:03] 2026-01-26 13:38:03,326 [wrapper] Test setup, not cleaning
[2026-01-26 14:38:03] 2026-01-26 13:38:03,328 [wrapper] apfmon messages muted
[2026-01-26 14:38:03] 2026-01-26 13:38:03,330 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:38:03] 2026-01-26 13:38:03,332 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:38:03]  *** Error codes and diagnostics ***
[2026-01-26 14:38:03]     "exeErrorCode": 0,
[2026-01-26 14:38:03]     "exeErrorDiag": "",
[2026-01-26 14:38:03]     "pilotErrorCode": 0,
[2026-01-26 14:38:03]     "pilotErrorDiag": "",
[2026-01-26 14:38:03]  *** Listing of results directory ***
[2026-01-26 14:38:03] total 673580
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 14:38:03] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:52 queuedata.json
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc       100 Jan 26 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:38:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 10:24 run_atlas
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc       105 Jan 26 10:24 job.xml
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 10:24 start_atlas.sh
[2026-01-26 14:38:03] drwxrwx--x 2 boinc boinc      4096 Jan 26 10:24 shared
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc    597771 Jan 26 10:24 input.tar.gz
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc      8988 Jan 26 10:24 init_data.xml
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc 494282391 Jan 26 10:24 EVNT.48318040._000028.pool.root.1
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc         0 Jan 26 10:24 boinc_setup_complete
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc         0 Jan 26 10:24 boinc_lockfile
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc      2533 Jan 26 10:24 pandaJob.out
[2026-01-26 14:38:03] -rw------- 1 boinc boinc   1004246 Jan 26 10:24 agis_schedconf.cvmfs.json
[2026-01-26 14:38:03] -rw------- 1 boinc boinc       425 Jan 26 10:24 workernode_map.json
[2026-01-26 14:38:03] drwx------ 5 boinc boinc      4096 Jan 26 10:24 pilot3
[2026-01-26 14:38:03] -rw------- 1 boinc boinc        95 Jan 26 14:37 pilot_heartbeat.json
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc       531 Jan 26 14:37 boinc_task_state.xml
[2026-01-26 14:38:03] -rw------- 1 boinc boinc 186312114 Jan 26 14:37 HITS.48318042._001403.pool.root.1
[2026-01-26 14:38:03] -rw------- 1 boinc boinc      1025 Jan 26 14:37 memory_monitor_summary.json
[2026-01-26 14:38:03] -rw------- 1 boinc boinc   1516246 Jan 26 14:37 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:38:03] -rw------- 1 boinc boinc    420701 Jan 26 14:37 log.48318042._001403.job.log.tgz.1
[2026-01-26 14:38:03] -rw------- 1 boinc boinc      6295 Jan 26 14:37 heartbeat.json
[2026-01-26 14:38:03] -rw------- 1 boinc boinc      4899 Jan 26 14:38 pilotlog.txt
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc      8192 Jan 26 14:38 boinc_mmap_file
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc        28 Jan 26 14:38 wrapper_checkpoint.txt
[2026-01-26 14:38:03] -rw------- 1 boinc boinc   2180697 Jan 26 14:38 log.48318042._001403.job.log.1
[2026-01-26 14:38:03] -rw------- 1 boinc boinc       357 Jan 26 14:38 output.list
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc       620 Jan 26 14:38 runtime_log
[2026-01-26 14:38:03] -rw------- 1 boinc boinc   2621440 Jan 26 14:38 result.tar.gz
[2026-01-26 14:38:03] -rw------- 1 boinc boinc       645 Jan 26 14:38 SN6MDmQMK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6A8KDmp4Vayn.diag
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc      8887 Jan 26 14:38 runtime_log.err
[2026-01-26 14:38:03] -rw-r--r-- 1 boinc boinc     21106 Jan 26 14:38 stderr.txt
[2026-01-26 14:38:03] HITS file was successfully produced:
[2026-01-26 14:38:03] -rw------- 1 boinc boinc 186312114 Jan 26 14:37 shared/HITS.pool.root.1
[2026-01-26 14:38:03]  *** Contents of shared directory: ***
[2026-01-26 14:38:03] total 667816
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 10:24 start_atlas.sh
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc    597771 Jan 26 10:24 input.tar.gz
[2026-01-26 14:38:03] -rw-r--r-- 2 boinc boinc 494282391 Jan 26 10:24 ATLAS.root_0
[2026-01-26 14:38:03] -rw------- 1 boinc boinc 186312114 Jan 26 14:37 HITS.pool.root.1
[2026-01-26 14:38:03] -rw------- 1 boinc boinc   2621440 Jan 26 14:38 result.tar.gz
14:38:05 (678829): run_atlas exited; CPU time 30307.788279
14:38:05 (678829): called boinc_finish(0)

</stderr_txt>
]]>

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