Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-27 13:26:49 (14392): vboxwrapper version 26210
2026-01-27 13:26:49 (14392): BOINC client version: 8.2.4
2026-01-27 13:26:50 (14392): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-01-27 13:26:51 (14392): Successfully copied 'init_data.xml' to the shared directory.
2026-01-27 13:26:51 (14392): Create VM. (boinc_eca8b7f80511b9c8, slot#23)
2026-01-27 13:26:52 (14392): Setting Memory Size for VM. (4800MB)
2026-01-27 13:26:52 (14392): Setting CPU Count for VM. (8)
2026-01-27 13:26:52 (14392): Setting Chipset Options for VM.
2026-01-27 13:26:53 (14392): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-27 13:26:53 (14392): Setting Boot Options for VM.
2026-01-27 13:26:53 (14392): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-27 13:26:54 (14392): Enabling VM Network Access.
2026-01-27 13:26:54 (14392): Disabling USB Support for VM.
2026-01-27 13:26:54 (14392): Disabling COM Port Support for VM.
2026-01-27 13:26:54 (14392): Disabling LPT Port Support for VM.
2026-01-27 13:26:55 (14392): Disabling Audio Support for VM.
2026-01-27 13:26:55 (14392): Disabling Clipboard Support for VM.
2026-01-27 13:26:55 (14392): Disabling Drag and Drop Support for VM.
2026-01-27 13:26:56 (14392): Adding storage controller(s) to VM.
2026-01-27 13:26:56 (14392): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-27 13:26:58 (14392): Adding VirtualBox Guest Additions to VM.
2026-01-27 13:26:58 (14392): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-27 13:26:59 (14392): forwarding host port 53823 to guest port 80
2026-01-27 13:26:59 (14392): Enabling remote desktop for VM.
2026-01-27 13:26:59 (14392): Required extension pack not installed, remote desktop not enabled.
2026-01-27 13:26:59 (14392): Enabling shared directory for VM.
2026-01-27 13:27:00 (14392): Starting VM using VBoxManage interface. (boinc_eca8b7f80511b9c8, slot#23)
2026-01-27 13:27:08 (14392): Successfully started VM. (PID = '17912')
2026-01-27 13:27:08 (14392): Reporting VM Process ID to BOINC.
2026-01-27 13:27:08 (14392): Guest Log: BIOS: VirtualBox 7.1.4
2026-01-27 13:27:08 (14392): Guest Log: CPUID EDX: 0x178bfbff
2026-01-27 13:27:08 (14392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-27 13:27:08 (14392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-27 13:27:08 (14392): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-27 13:27:08 (14392): Detected: Web Application Enabled (http://localhost:53823)
2026-01-27 13:27:08 (14392): Preference change detected
2026-01-27 13:27:08 (14392): Setting CPU throttle for VM. (100%)
2026-01-27 13:27:08 (14392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 13:27:10 (14392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-27 13:27:10 (14392): Guest Log: BIOS: Booting from Hard Disk...
2026-01-27 13:27:13 (14392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-27 13:27:13 (14392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-27 13:27:13 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-27 13:27:20 (14392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-27 13:27:20 (14392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-27 13:27:29 (14392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000269 main     Log opened 2026-01-27T13:27:27.180011000Z
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000527 main     OS Product: Linux
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000583 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000635 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000678 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000679 main     Process ID: 1381
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.000680 main     Package type: LINUX_64BITS_GENERIC
2026-01-27 13:27:29 (14392): Guest Log: 00:00:00.002304 main     5.2.32 r132073 started. Verbose level = 0
2026-01-27 13:27:29 (14392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-27 13:27:29 (14392): Guest Log: [INFO] Mounting shared directory
2026-01-27 13:27:29 (14392): Guest Log: [INFO] Checking for init_data.xml
2026-01-27 13:27:35 (14392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-27 13:27:35 (14392): Guest Log: [INFO] Detected branch: prod
2026-01-27 13:27:35 (14392): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-27 13:27:35 (14392): Guest Log: Copying input files
2026-01-27 13:27:39 (14392): Guest Log: Copied input files into RunAtlas.
2026-01-27 13:27:39 (14392): Guest Log: 00:00:10.005159 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 243 241 000ns (GuestNow=1 769 516 858 941 304 000 ns GuestLast=1 769 520 447 184 545 000 ns fSetTimeLastLoop=true )
2026-01-27 13:27:39 (14392): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-27 13:27:39 (14392): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-27 13:27:39 (14392): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-27 13:27:39 (14392): Guest Log: Further information can be found at the LHC@home message board.
2026-01-27 13:27:49 (14392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-27 13:27:49 (14392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-27 13:27:49 (14392): Guest Log: 2.6.3.0 1657 0 30120 155583 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-27 13:27:51 (14392): Guest Log: copied the webapp to /var/www
2026-01-27 13:27:51 (14392): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-27 13:27:51 (14392): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-27 13:27:51 (14392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-27 13:27:51 (14392): Guest Log:  *** Starting ATLAS job. (PandaID=6983306302 taskID=48318042) ***
2026-01-27 13:32:29 (14392): Preference change detected
2026-01-27 13:32:29 (14392): Setting CPU throttle for VM. (100%)
2026-01-27 13:32:30 (14392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 15:07:14 (14392): Status Report: Elapsed Time: '6000.000000'
2026-01-27 15:07:14 (14392): Status Report: CPU Time: '40034.796875'
2026-01-27 16:47:20 (14392): Status Report: Elapsed Time: '12000.000000'
2026-01-27 16:47:20 (14392): Status Report: CPU Time: '85351.828125'
2026-01-27 17:05:01 (14392): Guest Log:  *** Job finished ***
2026-01-27 17:05:01 (14392): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,209 | INFO     | PID=6098 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,211 | INFO     | found 0 job(s) in 20 queues
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:55,212 | INFO     | [monitor] control thread has ended
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,252 | INFO     | all workflow threads have been joined
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,252 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,252 | INFO     | traces error code: 0
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,431 [wrapper] ==== pilot stdout END ====
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,444 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,456 [wrapper] pilotpid: 6098
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,470 [wrapper] Pilot exit status: 0
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,640 [wrapper] pandaids: 6983306302
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,716 [wrapper] cleanup supervisor_pilot 27959 6099
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,729 [wrapper] Test setup, not cleaning
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,741 [wrapper] apfmon messages muted
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,752 [wrapper] ==== wrapper stdout END ====
2026-01-27 17:05:01 (14392): Guest Log: 2026-01-27 16:04:58,763 [wrapper] ==== wrapper stderr END ====
2026-01-27 17:05:01 (14392): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 17:05:01 (14392): Guest Log:     "exeErrorCode": 0,
2026-01-27 17:05:01 (14392): Guest Log:     "exeErrorDiag": "",
2026-01-27 17:05:01 (14392): Guest Log:     "pilotErrorCode": 0,
2026-01-27 17:05:01 (14392): Guest Log:     "pilotErrorDiag": "",
2026-01-27 17:05:01 (14392): Guest Log:  *** Listing of results directory ***
2026-01-27 17:05:01 (14392): Guest Log: total 191548
2026-01-27 17:05:01 (14392): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 18:47 pilot3.tar.gz
2026-01-27 17:05:01 (14392): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 18:49 runpilot2-wrapper.sh
2026-01-27 17:05:01 (14392): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 18:51 queuedata.json
2026-01-27 17:05:01 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas      6009 Jan 27 12:27 init_data.xml
2026-01-27 17:05:01 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas    597759 Jan 27 12:27 input.tar.gz
2026-01-27 17:05:01 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 27 12:27 start_atlas.sh
2026-01-27 17:05:01 (14392): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 27 12:27 EVNT.48318040._000030.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 17:05:01 (14392): Guest Log: -rw-r--r--. 1 atlas atlas      2531 Jan 27 12:27 pandaJob.out
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas   1002853 Jan 27 12:29 agis_schedconf.cvmfs.json
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas       421 Jan 27 12:29 workernode_map.json
2026-01-27 17:05:01 (14392): Guest Log: drwx------. 5 atlas atlas      4096 Jan 27 12:29 pilot3
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas 187850931 Jan 27 16:03 HITS.48318042._001460.pool.root.1
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas      1034 Jan 27 16:04 memory_monitor_summary.json
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 16:04 agis_ddmendpoints.agis.ALL.json
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas    431214 Jan 27 16:04 log.48318042._001460.job.log.tgz.1
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas      6335 Jan 27 16:04 heartbeat.json
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 16:04 pilot_heartbeat.json
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 27 16:04 pilotlog.txt
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas   1784733 Jan 27 16:04 log.48318042._001460.job.log.1
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 16:04 output.list
2026-01-27 17:05:01 (14392): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 16:04 runtime_log
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas   2232320 Jan 27 16:04 result.tar.gz
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas       680 Jan 27 16:04 sa3KDmUMK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnY1KDmVAu3fm.diag
2026-01-27 17:05:01 (14392): Guest Log: -rw-r--r--. 1 atlas atlas      8814 Jan 27 16:04 runtime_log.err
2026-01-27 17:05:01 (14392): Guest Log: Looking for outputfile HITS.48318042._001460.pool.root.1
2026-01-27 17:05:01 (14392): Guest Log: HITS file was successfully produced
2026-01-27 17:05:01 (14392): Guest Log: -rw-------. 1 atlas atlas 187850931 Jan 27 16:03 /home/atlas/RunAtlas/HITS.48318042._001460.pool.root.1
2026-01-27 17:05:03 (14392): Guest Log: Successfully finished the ATLAS job!
2026-01-27 17:05:03 (14392): Guest Log: Copying the results back to the shared directory!
2026-01-27 17:05:03 (14392): Guest Log:  *** Contents of shared directory: ***
2026-01-27 17:05:03 (14392): Guest Log: total 672148
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root 497568042 Jan 27 12:26 ATLAS.root_0
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root 187850931 Jan 27 16:05 HITS.pool.root.1
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root      6009 Jan 27 12:26 init_data.xml
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root    597759 Jan 26 03:58 input.tar.gz
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root   2232320 Jan 27 16:05 result.tar.gz
2026-01-27 17:05:03 (14392): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 03:58 start_atlas.sh
2026-01-27 17:05:03 (14392): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 17:05:04 (14392): VM Completion File Detected.
2026-01-27 17:05:04 (14392): Powering off VM.
2026-01-27 17:05:05 (14392): Successfully stopped VM.
2026-01-27 17:05:05 (14392): Deregistering VM. (boinc_eca8b7f80511b9c8, slot#23)
2026-01-27 17:05:05 (14392): Removing network bandwidth throttle group from VM.
2026-01-27 17:05:06 (14392): Removing VM from VirtualBox.
2026-01-27 17:05:11 (14392): called boinc_finish(0)

</stderr_txt>
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