Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:44:16 (617351): wrapper (7.7.26015): starting
03:44:16 (617351): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 03:44:16] Arguments: --nthreads 12
[2026-01-26 03:44:16] Threads: 12
[2026-01-26 03:44:16] Checking for CVMFS
[2026-01-26 03:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 03:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 03:44:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 03:44:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 03:44:16] 2.13.0.0 88587 1892 44100 155530 3 50 80056845 82903041 0 130560 0 280377 99.971 20322 565 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 03:44:16] CVMFS is ok
[2026-01-26 03:44:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 03:44:16] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 03:44:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 03:44:16] Further information can be found at the LHC@home message board.
[2026-01-26 03:44:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 03:44:16] Checking for apptainer binary...
[2026-01-26 03:44:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 03:44:16] Running /usr/bin/apptainer --version
[2026-01-26 03:44:16] apptainer version 1.4.5
[2026-01-26 03:44:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 03:44:17] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2026-01-26 03:44:17] apptainer works
[2026-01-26 03:44:17] Set ATHENA_PROC_NUMBER=12
[2026-01-26 03:44:17] Set ATHENA_CORE_NUMBER=12
[2026-01-26 03:44:17] Starting ATLAS job with PandaID=6983601769
[2026-01-26 03:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 05:42:50]  *** The last 200 lines of the pilot log: ***
[2026-01-26 05:42:50] 2026-01-26 05:42:04,837 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,837 | INFO     | log transfer has been attempted: DONE
[2026-01-26 05:42:50] 2026-01-26 05:42:04,837 | INFO     | job 6983601769 has finished - writing final server update
[2026-01-26 05:42:50] 2026-01-26 05:42:04,838 | INFO     | total number of processed events: 400 (read)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6983601769/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | INFO     | extracted standard info from prmon json
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 05:42:50] 2026-01-26 05:42:04,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 05:42:50] 2026-01-26 05:42:04,840 | INFO     | fitting pss+swap vs Time
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | sum of square deviations: 483971865.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | sum of deviations: -15120578221.500002
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | mean x: 1769402600.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | mean y: 2745144.5086206896
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | intersect: 55283624800.985695
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | chi2: 2.07929991807782
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | sum of square deviations: 424045160.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | sum of deviations: -6566337435.99999
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | mean x: 1769402448.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | mean y: 2766212.7297297297
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | intersect: 27401955331.29537
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | chi2: 1.3911077749386684
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | current chi2=1.3911077749386684 (change=33.097300546009805 %)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,841 | INFO     | sum of square deviations: 369281342.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of deviations: -6059252884.499997
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean x: 1769402295.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean y: 2767625.9905660376
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | intersect: 29035525929.638935
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | chi2: 1.3889825515084657
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | current chi2=1.3889825515084657 (change=0.15277201870979507 %)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | right removable region: 105
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of square deviations: 424045160.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of deviations: -28804302663.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean x: 1769402753.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean y: 2778990.873873874
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | intersect: 120193780416.65936
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | chi2: 0.8996845306750461
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | current chi2=0.8996845306750461 (change=56.731372763831644 %)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of square deviations: 369281342.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of deviations: -24314432646.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean x: 1769402905.5
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | mean y: 2766447.7641509436
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | intersect: 116504801126.9225
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | chi2: 0.8953787678640237
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | current chi2=0.8953787678640237 (change=0.478585844728449 %)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | left removable region: 20
[2026-01-26 05:42:50] 2026-01-26 05:42:04,842 | INFO     | sum of square deviations: 190403570.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | sum of deviations: -5830325954.000001
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | mean x: 1769402875.0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | mean y: 2756300.494117647
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | intersect: 54183439494.58927
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | chi2: 0.11074597449226739
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | current memory leak: -30.62 B/s (using 85 data points, chi2=0.11)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | could have reported an average CPU frequency of 3999 MHz (7 samples)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | ..............................
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . Timing measurements:
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . get job = 0 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . initial setup = 5 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . payload setup = 5 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . stage-in = 0 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . payload execution = 7027 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . stage-out = 0 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | . log creation = 0 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,843 | INFO     | ..............................
[2026-01-26 05:42:50] 2026-01-26 05:42:04,879 | INFO     | 
[2026-01-26 05:42:50] 2026-01-26 05:42:04,879 | INFO     | job summary report
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | --------------------------------------------------
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | PanDA job id: 6983601769
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | task id: 48329261
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | errors: (none)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | pilot state: finished 
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | transexitcode: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | exeerrorcode: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | exeerrordiag: 
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | exitcode: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | exitmsg: OK
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | cpuconsumptiontime: 73937 s
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | nevents: 400
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | neventsw: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | pid: 625648
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | pgrp: 625648
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | corecount: 12
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | event service: False
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | sizes: {0: 2283266, 1: 2284391, 12: 2284391, 7035: 2311760, 7037: 2320772, 7038: 2320828, 7040: 2321150}
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | --------------------------------------------------
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | 
[2026-01-26 05:42:50] 2026-01-26 05:42:04,880 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | job 6983601769 has completed (purged errors)
[2026-01-26 05:42:50] 2026-01-26 05:42:04,905 | INFO     | overall cleanup function is called
[2026-01-26 05:42:50] 2026-01-26 05:42:05,912 | INFO     | --- collectZombieJob: --- 10, [625648]
[2026-01-26 05:42:50] 2026-01-26 05:42:05,912 | INFO     | zombie collector waiting for pid 625648
[2026-01-26 05:42:50] 2026-01-26 05:42:05,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 05:42:50] 2026-01-26 05:42:05,912 | INFO     | collected zombie processes
[2026-01-26 05:42:50] 2026-01-26 05:42:05,912 | INFO     | will attempt to kill all subprocesses of pid=625648
[2026-01-26 05:42:50] 2026-01-26 05:42:05,949 | INFO     | process IDs to be killed: [625648] (in reverse order)
[2026-01-26 05:42:50] 2026-01-26 05:42:05,996 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 05:42:50] 2026-01-26 05:42:05,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 05:42:50] 2026-01-26 05:42:05,999 | INFO     | did not find any defunct processes belonging to 625648
[2026-01-26 05:42:50] 2026-01-26 05:42:06,001 | INFO     | did not find any defunct processes belonging to 625648
[2026-01-26 05:42:50] 2026-01-26 05:42:06,001 | INFO     | ready for new job
[2026-01-26 05:42:50] 2026-01-26 05:42:06,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 05:42:50] 2026-01-26 05:42:06,002 | INFO     | **************************************
[2026-01-26 05:42:50] 2026-01-26 05:42:06,002 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 05:42:50] 2026-01-26 05:42:06,002 | INFO     | **************************************
[2026-01-26 05:42:50] 2026-01-26 05:42:06,002 | INFO     | 
[2026-01-26 05:42:50] 2026-01-26 05:42:06,003 | INFO     | architecture information:
[2026-01-26 05:42:50] 2026-01-26 05:42:06,003 | INFO     | executing command: cat /etc/os-release
[2026-01-26 05:42:50] 2026-01-26 05:42:06,023 | INFO     | cat /etc/os-release:
[2026-01-26 05:42:50] NAME="CentOS Linux"
[2026-01-26 05:42:50] VERSION="7 (Core)"
[2026-01-26 05:42:50] ID="centos"
[2026-01-26 05:42:50] ID_LIKE="rhel fedora"
[2026-01-26 05:42:50] VERSION_ID="7"
[2026-01-26 05:42:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 05:42:50] ANSI_COLOR="0;31"
[2026-01-26 05:42:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 05:42:50] HOME_URL="https://www.centos.org/"
[2026-01-26 05:42:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 05:42:50] 
[2026-01-26 05:42:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 05:42:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 05:42:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 05:42:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 05:42:50] 
[2026-01-26 05:42:50] 2026-01-26 05:42:06,023 | INFO     | **************************************
[2026-01-26 05:42:50] 2026-01-26 05:42:06,526 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-01-26 05:42:50] 2026-01-26 05:42:06,542 | INFO     | sufficient remaining disk space (623953051648 B)
[2026-01-26 05:42:50] 2026-01-26 05:42:06,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 05:42:50] 2026-01-26 05:42:06,542 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 05:42:50] 2026-01-26 05:42:06,542 | INFO     | update_server=False
[2026-01-26 05:42:50] 2026-01-26 05:42:06,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 05:42:50] 2026-01-26 05:42:06,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:42:50] 2026-01-26 05:42:06,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 05:42:50] 2026-01-26 05:42:06,543 | INFO     | aborting loop
[2026-01-26 05:42:50] 2026-01-26 05:42:06,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 05:42:50] 2026-01-26 05:42:07,083 | INFO     | all data control threads have been joined
[2026-01-26 05:42:50] 2026-01-26 05:42:07,267 | INFO     | all payload control threads have been joined
[2026-01-26 05:42:50] 2026-01-26 05:42:07,548 | INFO     | [job] queue monitor thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:07,548 | INFO     | [job] retrieve thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:07,548 | INFO     | [job] job monitor thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:07,635 | INFO     | all job control threads have been joined
[2026-01-26 05:42:50] 2026-01-26 05:42:08,056 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,088 | INFO     | [data] control thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,272 | INFO     | [payload] control thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,378 | INFO     | [job] validate thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 05:42:50] 2026-01-26 05:42:08,599 | INFO     | [payload] validate_post thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,620 | INFO     | [data] copytool_out thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,640 | INFO     | [job] control thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,771 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,785 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:08,965 | INFO     | [payload] failed_post thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:09,015 | INFO     | [data] copytool_in thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:12,443 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:17,362 | INFO     | job.realtimelogging is not enabled
[2026-01-26 05:42:50] 2026-01-26 05:42:18,367 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 05:42:50] 2026-01-26 05:42:37,290 | INFO     | PID=621076 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 05:42:50] 2026-01-26 05:42:37,292 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 05:42:50] 2026-01-26 05:42:37,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 05:42:50] 2026-01-26 05:42:37,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 05:42:50] 2026-01-26 05:42:43,971 | INFO     | [monitor] cgroup control has ended
[2026-01-26 05:42:50] 2026-01-26 05:42:44,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129989822936896)>', '<ExcThread(monitor, started 129989190084352)>']
[2026-01-26 05:42:50] 2026-01-26 05:42:45,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 05:42:50] 2026-01-26 05:42:45,332 | INFO     | [monitor] control thread has ended
[2026-01-26 05:42:50] 2026-01-26 05:42:49,873 | INFO     | all workflow threads have been joined
[2026-01-26 05:42:50] 2026-01-26 05:42:49,873 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 05:42:50] 2026-01-26 05:42:49,873 | INFO     | traces error code: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:49,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 05:42:50] 2026-01-26 05:42:50,073 [wrapper] ==== pilot stdout END ====
[2026-01-26 05:42:50] 2026-01-26 05:42:50,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 05:42:50] 2026-01-26 05:42:50,077 [wrapper] pilotpid: 621076
[2026-01-26 05:42:50] 2026-01-26 05:42:50,080 [wrapper] Pilot exit status: 0
[2026-01-26 05:42:50] 2026-01-26 05:42:50,087 [wrapper] pandaids: 6983601769
[2026-01-26 05:42:50] 2026-01-26 05:42:50,105 [wrapper] cleanup supervisor_pilot  654030 621077
[2026-01-26 05:42:50] 2026-01-26 05:42:50,107 [wrapper] Test setup, not cleaning
[2026-01-26 05:42:50] 2026-01-26 05:42:50,108 [wrapper] apfmon messages muted
[2026-01-26 05:42:50] 2026-01-26 05:42:50,110 [wrapper] ==== wrapper stdout END ====
[2026-01-26 05:42:50] 2026-01-26 05:42:50,113 [wrapper] ==== wrapper stderr END ====
[2026-01-26 05:42:50]  *** Error codes and diagnostics ***
[2026-01-26 05:42:50]     "exeErrorCode": 0,
[2026-01-26 05:42:50]     "exeErrorDiag": "",
[2026-01-26 05:42:50]     "pilotErrorCode": 0,
[2026-01-26 05:42:50]     "pilotErrorDiag": "",
[2026-01-26 05:42:50]  *** Listing of results directory ***
[2026-01-26 05:42:50] total 477008
[2026-01-26 05:42:50] -rwx------ 1 boinc boinc     36322 Jan 25 22:58 runpilot2-wrapper.sh
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc      5111 Jan 25 22:58 queuedata.json
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:00 pilot3.tar.gz
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc       100 Jan 26 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 05:42:50] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 03:44 run_atlas
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc       105 Jan 26 03:44 job.xml
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc      9904 Jan 26 03:44 init_data.xml
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc 265650351 Jan 26 03:44 EVNT.48329259._000002.pool.root.1
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc     15845 Jan 26 03:44 start_atlas.sh
[2026-01-26 05:42:50] drwxrwx--x 2 boinc boinc      4096 Jan 26 03:44 shared
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc    597764 Jan 26 03:44 input.tar.gz
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc         0 Jan 26 03:44 boinc_lockfile
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc      2606 Jan 26 03:44 pandaJob.out
[2026-01-26 05:42:50] -rw------- 1 boinc boinc   1004246 Jan 26 03:44 agis_schedconf.cvmfs.json
[2026-01-26 05:42:50] -rw------- 1 boinc boinc   1516246 Jan 26 03:44 agis_ddmendpoints.agis.ALL.json
[2026-01-26 05:42:50] -rw------- 1 boinc boinc       421 Jan 26 03:44 workernode_map.json
[2026-01-26 05:42:50] drwx------ 5 boinc boinc      4096 Jan 26 03:44 pilot3
[2026-01-26 05:42:50] -rw------- 1 boinc boinc 215980977 Jan 26 05:41 HITS.48329261._000041.pool.root.1
[2026-01-26 05:42:50] -rw------- 1 boinc boinc      1043 Jan 26 05:41 memory_monitor_summary.json
[2026-01-26 05:42:50] -rw------- 1 boinc boinc    426318 Jan 26 05:42 log.48329261._000041.job.log.tgz.1
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc       529 Jan 26 05:42 boinc_task_state.xml
[2026-01-26 05:42:50] -rw------- 1 boinc boinc      6325 Jan 26 05:42 heartbeat.json
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc      8192 Jan 26 05:42 boinc_mmap_file
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc        27 Jan 26 05:42 wrapper_checkpoint.txt
[2026-01-26 05:42:50] -rw------- 1 boinc boinc        95 Jan 26 05:42 pilot_heartbeat.json
[2026-01-26 05:42:50] -rw------- 1 boinc boinc      4823 Jan 26 05:42 pilotlog.txt
[2026-01-26 05:42:50] -rw------- 1 boinc boinc   1013442 Jan 26 05:42 log.48329261._000041.job.log.1
[2026-01-26 05:42:50] -rw------- 1 boinc boinc       357 Jan 26 05:42 output.list
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc       620 Jan 26 05:42 runtime_log
[2026-01-26 05:42:50] -rw------- 1 boinc boinc   1454080 Jan 26 05:42 result.tar.gz
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc      9046 Jan 26 05:42 runtime_log.err
[2026-01-26 05:42:50] -rw------- 1 boinc boinc       654 Jan 26 05:42 NpCLDmhEO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmH51KDmUBFw8m.diag
[2026-01-26 05:42:50] -rw-r--r-- 1 boinc boinc     21267 Jan 26 05:42 stderr.txt
[2026-01-26 05:42:50] HITS file was successfully produced:
[2026-01-26 05:42:50] -rw------- 1 boinc boinc 215980977 Jan 26 05:41 shared/HITS.pool.root.1
[2026-01-26 05:42:50]  *** Contents of shared directory: ***
[2026-01-26 05:42:50] total 472376
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc 265650351 Jan 26 03:44 ATLAS.root_0
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc     15845 Jan 26 03:44 start_atlas.sh
[2026-01-26 05:42:50] -rw-r--r-- 2 boinc boinc    597764 Jan 26 03:44 input.tar.gz
[2026-01-26 05:42:50] -rw------- 1 boinc boinc 215980977 Jan 26 05:41 HITS.pool.root.1
[2026-01-26 05:42:50] -rw------- 1 boinc boinc   1454080 Jan 26 05:42 result.tar.gz
05:42:52 (617351): run_atlas exited; CPU time 73810.565297
05:42:52 (617351): called boinc_finish(0)

</stderr_txt>
]]>

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