Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:37 (756725): wrapper (7.7.26015): starting
14:47:37 (756725): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 14:47:37] Arguments: --nthreads 4
[2026-01-26 14:47:37] Threads: 4
[2026-01-26 14:47:37] Checking for CVMFS
[2026-01-26 14:47:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 14:47:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 14:47:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 14:47:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 14:47:37] 2.9.2.0 3269150 8473 102804 155548 3 50 34283354 36864001 0 130560 0 4877169 99.990 265570 5715 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 14:47:37] CVMFS is ok
[2026-01-26 14:47:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 14:47:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 14:47:37] Further information can be found at the LHC@home message board.
[2026-01-26 14:47:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 14:47:37] Checking for apptainer binary...
[2026-01-26 14:47:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 14:47:37] Running /usr/bin/apptainer --version
[2026-01-26 14:47:37] apptainer version 1.4.1-1.1
[2026-01-26 14:47:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 14:47:38] thA315b
[2026-01-26 14:47:38] apptainer works
[2026-01-26 14:47:38] Set ATHENA_PROC_NUMBER=4
[2026-01-26 14:47:38] Set ATHENA_CORE_NUMBER=4
[2026-01-26 14:47:38] Starting ATLAS job with PandaID=6983467177
[2026-01-26 14:47:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 16:36:01]  *** The last 200 lines of the pilot log: ***
[2026-01-26 16:36:01] 2026-01-26 15:35:36,060 | INFO     | process IDs to be killed: [765333] (in reverse order)
[2026-01-26 16:36:01] 2026-01-26 15:35:36,088 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 16:36:01] 2026-01-26 15:35:36,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 16:36:01] 2026-01-26 15:35:36,089 | INFO     | did not find any defunct processes belonging to 765333
[2026-01-26 16:36:01] 2026-01-26 15:35:36,090 | INFO     | did not find any defunct processes belonging to 765333
[2026-01-26 16:36:01] 2026-01-26 15:35:36,090 | INFO     | ready for new job
[2026-01-26 16:36:01] 2026-01-26 15:35:36,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 16:36:01] 2026-01-26 15:35:36,091 | INFO     | **************************************
[2026-01-26 16:36:01] 2026-01-26 15:35:36,091 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 16:36:01] 2026-01-26 15:35:36,091 | INFO     | **************************************
[2026-01-26 16:36:01] 2026-01-26 15:35:36,091 | INFO     | 
[2026-01-26 16:36:01] 2026-01-26 15:35:36,092 | INFO     | architecture information:
[2026-01-26 16:36:01] 2026-01-26 15:35:36,092 | INFO     | executing command: cat /etc/os-release
[2026-01-26 16:36:01] 2026-01-26 15:35:36,101 | INFO     | cat /etc/os-release:
[2026-01-26 16:36:01] NAME="CentOS Linux"
[2026-01-26 16:36:01] VERSION="7 (Core)"
[2026-01-26 16:36:01] ID="centos"
[2026-01-26 16:36:01] ID_LIKE="rhel fedora"
[2026-01-26 16:36:01] VERSION_ID="7"
[2026-01-26 16:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 16:36:01] ANSI_COLOR="0;31"
[2026-01-26 16:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 16:36:01] HOME_URL="https://www.centos.org/"
[2026-01-26 16:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 16:36:01] 
[2026-01-26 16:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 16:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 16:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 16:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 16:36:01] 
[2026-01-26 16:36:01] 2026-01-26 15:35:36,101 | INFO     | **************************************
[2026-01-26 16:36:01] 2026-01-26 15:35:36,605 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 16:36:01] 2026-01-26 15:35:36,618 | INFO     | sufficient remaining disk space (323137568768 B)
[2026-01-26 16:36:01] 2026-01-26 15:35:36,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 16:36:01] 2026-01-26 15:35:36,618 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 16:36:01] 2026-01-26 15:35:36,618 | INFO     | update_server=False
[2026-01-26 16:36:01] 2026-01-26 15:35:36,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 16:36:01] 2026-01-26 15:35:36,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:36:01] 2026-01-26 15:35:36,619 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 16:36:01] 2026-01-26 15:35:36,619 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 16:36:01] 2026-01-26 15:35:36,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 16:36:01] 2026-01-26 15:35:36,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 16:36:01] 2026-01-26 15:35:36,961 | INFO     | all data control threads have been joined
[2026-01-26 16:36:01] 2026-01-26 15:35:37,157 | INFO     | all payload control threads have been joined
[2026-01-26 16:36:01] 2026-01-26 15:35:37,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 16:36:01] 2026-01-26 15:35:37,331 | INFO     | aborting loop
[2026-01-26 16:36:01] 2026-01-26 15:35:37,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 16:36:01] 2026-01-26 15:35:37,401 | INFO     | all job control threads have been joined
[2026-01-26 16:36:01] 2026-01-26 15:35:37,624 | INFO     | [job] retrieve thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:37,625 | INFO     | [job] queue monitor thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:37,967 | INFO     | [data] control thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 16:36:01] 2026-01-26 15:35:38,162 | INFO     | [payload] control thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,251 | INFO     | [job] validate thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,337 | INFO     | [job] job monitor thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,345 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,406 | INFO     | [job] control thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,502 | INFO     | [data] copytool_in thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,505 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:38,935 | INFO     | [payload] validate_post thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:39,186 | INFO     | [payload] failed_post thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:39,347 | INFO     | [data] copytool_out thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:42,140 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:47,253 | INFO     | job.realtimelogging is not enabled
[2026-01-26 16:36:01] 2026-01-26 15:35:48,259 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 16:36:01] 2026-01-26 15:35:56,261 | INFO     | [monitor] cgroup control has ended
[2026-01-26 16:36:01] 2026-01-26 15:35:56,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631493228352)>', '<ExcThread(monitor, started 139630695397120)>']
[2026-01-26 16:36:01] 2026-01-26 15:35:56,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 16:36:01] 2026-01-26 15:35:56,725 | INFO     | [monitor] control thread has ended
[2026-01-26 16:36:01] 2026-01-26 15:36:01,622 | INFO     | all workflow threads have been joined
[2026-01-26 16:36:01] 2026-01-26 15:36:01,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 16:36:01] 2026-01-26 15:36:01,623 | INFO     | traces error code: 0
[2026-01-26 16:36:01] 2026-01-26 15:36:01,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 16:36:01] 2026-01-26 15:36:01,677 [wrapper] ==== pilot stdout END ====
[2026-01-26 16:36:01] 2026-01-26 15:36:01,679 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 16:36:01] 2026-01-26 15:36:01,682 [wrapper] pilotpid: 760824
[2026-01-26 16:36:01] 2026-01-26 15:36:01,684 [wrapper] Pilot exit status: 0
[2026-01-26 16:36:01] 2026-01-26 15:36:01,692 [wrapper] pandaids: 6983467177
[2026-01-26 16:36:01] 2026-01-26 15:36:01,710 [wrapper] cleanup supervisor_pilot  770661 760825
[2026-01-26 16:36:01] 2026-01-26 15:36:01,713 [wrapper] Test setup, not cleaning
[2026-01-26 16:36:01] 2026-01-26 15:36:01,715 [wrapper] apfmon messages muted
[2026-01-26 16:36:01] 2026-01-26 15:36:01,718 [wrapper] ==== wrapper stdout END ====
[2026-01-26 16:36:01] 2026-01-26 15:36:01,720 [wrapper] ==== wrapper stderr END ====
[2026-01-26 16:36:01]  *** Error codes and diagnostics ***
[2026-01-26 16:36:01]     "exeErrorCode": 0,
[2026-01-26 16:36:01]     "exeErrorDiag": "",
[2026-01-26 16:36:01]     "pilotErrorCode": 0,
[2026-01-26 16:36:01]     "pilotErrorDiag": "",
[2026-01-26 16:36:01]  *** Listing of results directory ***
[2026-01-26 16:36:01] total 469492
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-26 16:36:01] -rwx------ 1 boinc boinc     36322 Jan 25 23:55 runpilot2-wrapper.sh
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:56 queuedata.json
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc       100 Jan 26 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 16:36:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 14:47 run_atlas
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc       105 Jan 26 14:47 job.xml
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc 275026174 Jan 26 14:47 EVNT.48329652._000005.pool.root.1
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc    597774 Jan 26 14:47 input.tar.gz
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 14:47 start_atlas.sh
[2026-01-26 16:36:01] drwxrwx--x 2 boinc boinc      4096 Jan 26 14:47 shared
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc         0 Jan 26 14:47 boinc_setup_complete
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc      6443 Jan 26 14:47 init_data.xml
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc         0 Jan 26 14:47 boinc_lockfile
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc      2613 Jan 26 14:47 pandaJob.out
[2026-01-26 16:36:01] -rw------- 1 boinc boinc   1002197 Jan 26 14:47 agis_schedconf.cvmfs.json
[2026-01-26 16:36:01] -rw------- 1 boinc boinc   1516246 Jan 26 14:47 agis_ddmendpoints.agis.ALL.json
[2026-01-26 16:36:01] -rw------- 1 boinc boinc       418 Jan 26 14:47 workernode_map.json
[2026-01-26 16:36:01] drwx------ 5 boinc boinc      4096 Jan 26 14:47 pilot3
[2026-01-26 16:36:01] -rw------- 1 boinc boinc 199361203 Jan 26 16:35 HITS.48329654._000109.pool.root.1
[2026-01-26 16:36:01] -rw------- 1 boinc boinc        95 Jan 26 16:35 pilot_heartbeat.json
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc       529 Jan 26 16:35 boinc_task_state.xml
[2026-01-26 16:36:01] -rw------- 1 boinc boinc      1015 Jan 26 16:35 memory_monitor_summary.json
[2026-01-26 16:36:01] -rw------- 1 boinc boinc    284198 Jan 26 16:35 log.48329654._000109.job.log.tgz.1
[2026-01-26 16:36:01] -rw------- 1 boinc boinc      6284 Jan 26 16:35 heartbeat.json
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc        27 Jan 26 16:35 wrapper_checkpoint.txt
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc      8192 Jan 26 16:35 boinc_mmap_file
[2026-01-26 16:36:01] -rw------- 1 boinc boinc      4624 Jan 26 16:36 pilotlog.txt
[2026-01-26 16:36:01] -rw------- 1 boinc boinc    933982 Jan 26 16:36 log.48329654._000109.job.log.1
[2026-01-26 16:36:01] -rw------- 1 boinc boinc       357 Jan 26 16:36 output.list
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc       620 Jan 26 16:36 runtime_log
[2026-01-26 16:36:01] -rw------- 1 boinc boinc   1239040 Jan 26 16:36 result.tar.gz
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc      8901 Jan 26 16:36 runtime_log.err
[2026-01-26 16:36:01] -rw------- 1 boinc boinc       658 Jan 26 16:36 5iKNDmlBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE11KDmI6f3dn.diag
[2026-01-26 16:36:01] -rw-r--r-- 1 boinc boinc     10091 Jan 26 16:36 stderr.txt
[2026-01-26 16:36:01] HITS file was successfully produced:
[2026-01-26 16:36:01] -rw------- 1 boinc boinc 199361203 Jan 26 16:35 shared/HITS.pool.root.1
[2026-01-26 16:36:01]  *** Contents of shared directory: ***
[2026-01-26 16:36:01] total 465096
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc 275026174 Jan 26 14:47 ATLAS.root_0
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc    597774 Jan 26 14:47 input.tar.gz
[2026-01-26 16:36:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 14:47 start_atlas.sh
[2026-01-26 16:36:01] -rw------- 1 boinc boinc 199361203 Jan 26 16:35 HITS.pool.root.1
[2026-01-26 16:36:01] -rw------- 1 boinc boinc   1239040 Jan 26 16:36 result.tar.gz
16:36:03 (756725): run_atlas exited; CPU time 24757.310105
16:36:03 (756725): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN