Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:13 (625502): wrapper (7.7.26015): starting
16:41:13 (625502): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 16:41:13] Arguments: --nthreads 4
[2026-01-26 16:41:13] Threads: 4
[2026-01-26 16:41:13] Checking for CVMFS
[2026-01-26 16:41:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:41:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:41:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:41:14] 2.9.2.0 4135 2686 95060 155551 0 50 29248146 36864000 0 130560 0 1509850 99.988 98428 3208 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 16:41:14] CVMFS is ok
[2026-01-26 16:41:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:41:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:41:14] Further information can be found at the LHC@home message board.
[2026-01-26 16:41:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:41:14] Checking for apptainer binary...
[2026-01-26 16:41:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:41:14] Running /usr/bin/apptainer --version
[2026-01-26 16:41:14] apptainer version 1.4.1-1.1
[2026-01-26 16:41:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:41:14] atlasA237
[2026-01-26 16:41:14] apptainer works
[2026-01-26 16:41:14] Set ATHENA_PROC_NUMBER=4
[2026-01-26 16:41:14] Set ATHENA_CORE_NUMBER=4
[2026-01-26 16:41:14] Starting ATLAS job with PandaID=6983601730
[2026-01-26 16:41:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:40:54]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:40:54] 2026-01-26 19:40:24,007 | INFO     | did not find any defunct processes belonging to 634170
[2026-01-26 20:40:54] 2026-01-26 19:40:24,009 | INFO     | did not find any defunct processes belonging to 634170
[2026-01-26 20:40:54] 2026-01-26 19:40:24,009 | INFO     | ready for new job
[2026-01-26 20:40:54] 2026-01-26 19:40:24,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:40:54] 2026-01-26 19:40:24,010 | INFO     | **************************************
[2026-01-26 20:40:54] 2026-01-26 19:40:24,010 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:40:54] 2026-01-26 19:40:24,010 | INFO     | **************************************
[2026-01-26 20:40:54] 2026-01-26 19:40:24,010 | INFO     | 
[2026-01-26 20:40:54] 2026-01-26 19:40:24,011 | INFO     | architecture information:
[2026-01-26 20:40:54] 2026-01-26 19:40:24,011 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:40:54] 2026-01-26 19:40:24,025 | INFO     | cat /etc/os-release:
[2026-01-26 20:40:54] NAME="CentOS Linux"
[2026-01-26 20:40:54] VERSION="7 (Core)"
[2026-01-26 20:40:54] ID="centos"
[2026-01-26 20:40:54] ID_LIKE="rhel fedora"
[2026-01-26 20:40:54] VERSION_ID="7"
[2026-01-26 20:40:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:40:54] ANSI_COLOR="0;31"
[2026-01-26 20:40:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:40:54] HOME_URL="https://www.centos.org/"
[2026-01-26 20:40:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:40:54] 
[2026-01-26 20:40:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:40:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:40:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:40:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:40:54] 
[2026-01-26 20:40:54] 2026-01-26 19:40:24,025 | INFO     | **************************************
[2026-01-26 20:40:54] 2026-01-26 19:40:24,114 | WARNING  | process 634170 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:40:54] 2026-01-26 19:40:24,164 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:40:54] 2026-01-26 19:40:24,164 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:40:54] 2026-01-26 19:40:24,164 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 20:40:54] 2026-01-26 19:40:24,164 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 20:40:54] 2026-01-26 19:40:24,165 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6983601730/payload.stdout) since it has not been created yet
[2026-01-26 20:40:54] 2026-01-26 19:40:24,165 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 20:40:54] 2026-01-26 19:40:24,179 | INFO     | sufficient remaining disk space (327608696832 B)
[2026-01-26 20:40:54] 2026-01-26 19:40:24,180 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 20:40:54] 2026-01-26 19:40:24,180 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6983601730/HITS.48329261._000002.pool.root.1 since it does not exist
[2026-01-26 20:40:54] 2026-01-26 19:40:24,243 | INFO     | number of running child processes to parent process 634170: 1
[2026-01-26 20:40:54] 2026-01-26 19:40:24,243 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:40:54] 2026-01-26 19:40:24,243 | INFO     | aborting job monitoring since job object (job id=6983601730) has expired
[2026-01-26 20:40:54] 2026-01-26 19:40:24,528 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 20:40:54] 2026-01-26 19:40:24,544 | INFO     | sufficient remaining disk space (327608696832 B)
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | INFO     | update_server=False
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:40:54] 2026-01-26 19:40:24,545 | INFO     | will abort loop
[2026-01-26 20:40:54] 2026-01-26 19:40:24,684 | INFO     | all data control threads have been joined
[2026-01-26 20:40:54] 2026-01-26 19:40:24,956 | INFO     | all payload control threads have been joined
[2026-01-26 20:40:54] 2026-01-26 19:40:25,550 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,551 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,551 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,601 | INFO     | all job control threads have been joined
[2026-01-26 20:40:54] 2026-01-26 19:40:25,610 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,690 | INFO     | [data] control thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,959 | INFO     | [payload] control thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:25,991 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,542 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,551 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,604 | INFO     | [job] control thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,702 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,867 | INFO     | [job] validate thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:26,975 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:27,149 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:27,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:40:54] 2026-01-26 19:40:31,412 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:34,880 | INFO     | job.realtimelogging is not enabled
[2026-01-26 20:40:54] 2026-01-26 19:40:35,886 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:40:54] 2026-01-26 19:40:46,548 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:40:54] 2026-01-26 19:40:47,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811038508864)>', '<ExcThread(monitor, started 139810027067136)>']
[2026-01-26 20:40:54] 2026-01-26 19:40:53,007 | INFO     | all workflow threads have been joined
[2026-01-26 20:40:54] 2026-01-26 19:40:53,008 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:40:54] 2026-01-26 19:40:53,008 | INFO     | traces error code: 0
[2026-01-26 20:40:54] 2026-01-26 19:40:53,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | INFO     | PID=629641 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:40:54] 2026-01-26 19:40:54,664 | INFO     | [monitor] control thread has ended
[2026-01-26 20:40:54] 2026-01-26 19:40:54,733 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:40:54] 2026-01-26 19:40:54,738 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:40:54] 2026-01-26 19:40:54,741 [wrapper] pilotpid: 629641
[2026-01-26 20:40:54] 2026-01-26 19:40:54,745 [wrapper] Pilot exit status: 0
[2026-01-26 20:40:54] 2026-01-26 19:40:54,756 [wrapper] pandaids: 6983601730
[2026-01-26 20:40:54] 2026-01-26 19:40:54,782 [wrapper] cleanup supervisor_pilot  666561 629642
[2026-01-26 20:40:54] 2026-01-26 19:40:54,786 [wrapper] Test setup, not cleaning
[2026-01-26 20:40:54] 2026-01-26 19:40:54,789 [wrapper] apfmon messages muted
[2026-01-26 20:40:54] 2026-01-26 19:40:54,793 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:40:54] 2026-01-26 19:40:54,797 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:40:54]  *** Error codes and diagnostics ***
[2026-01-26 20:40:54]     "exeErrorCode": 0,
[2026-01-26 20:40:54]     "exeErrorDiag": "",
[2026-01-26 20:40:54]     "pilotErrorCode": 0,
[2026-01-26 20:40:54]     "pilotErrorDiag": "",
[2026-01-26 20:40:54]  *** Listing of results directory ***
[2026-01-26 20:40:54] total 466044
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:54 queuedata.json
[2026-01-26 20:40:54] -rwx------ 1 boinc boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:40:54] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:41 run_atlas
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:41 job.xml
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc 264055385 Jan 26 16:41 EVNT.48329259._000001.pool.root.1
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc    597760 Jan 26 16:41 input.tar.gz
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:41 start_atlas.sh
[2026-01-26 20:40:54] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:41 shared
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:41 boinc_setup_complete
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc      6371 Jan 26 16:41 init_data.xml
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:41 boinc_lockfile
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc      2601 Jan 26 16:41 pandaJob.out
[2026-01-26 20:40:54] -rw------- 1 boinc boinc   1002189 Jan 26 16:41 agis_schedconf.cvmfs.json
[2026-01-26 20:40:54] -rw------- 1 boinc boinc       430 Jan 26 16:41 workernode_map.json
[2026-01-26 20:40:54] drwx------ 5 boinc boinc      4096 Jan 26 16:41 pilot3
[2026-01-26 20:40:54] -rw------- 1 boinc boinc 204457469 Jan 26 20:39 HITS.48329261._000002.pool.root.1
[2026-01-26 20:40:54] -rw------- 1 boinc boinc        95 Jan 26 20:40 pilot_heartbeat.json
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc       530 Jan 26 20:40 boinc_task_state.xml
[2026-01-26 20:40:54] -rw------- 1 boinc boinc      1048 Jan 26 20:40 memory_monitor_summary.json
[2026-01-26 20:40:54] -rw------- 1 boinc boinc   1516246 Jan 26 20:40 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:40:54] -rw------- 1 boinc boinc    392165 Jan 26 20:40 log.48329261._000002.job.log.tgz.1
[2026-01-26 20:40:54] -rw------- 1 boinc boinc      6331 Jan 26 20:40 heartbeat.json
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc      8192 Jan 26 20:40 boinc_mmap_file
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc        28 Jan 26 20:40 wrapper_checkpoint.txt
[2026-01-26 20:40:54] -rw------- 1 boinc boinc       746 Jan 26 20:40 pilotlog.txt
[2026-01-26 20:40:54] -rw------- 1 boinc boinc   2007016 Jan 26 20:40 log.48329261._000002.job.log.1
[2026-01-26 20:40:54] -rw------- 1 boinc boinc       357 Jan 26 20:40 output.list
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc       620 Jan 26 20:40 runtime_log
[2026-01-26 20:40:54] -rw------- 1 boinc boinc   2416640 Jan 26 20:40 result.tar.gz
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc      8912 Jan 26 20:40 runtime_log.err
[2026-01-26 20:40:54] -rw------- 1 boinc boinc       665 Jan 26 20:40 I5gLDmQBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTX8KDmqn7wTm.diag
[2026-01-26 20:40:54] -rw-r--r-- 1 boinc boinc     11624 Jan 26 20:40 stderr.txt
[2026-01-26 20:40:54] HITS file was successfully produced:
[2026-01-26 20:40:54] -rw------- 1 boinc boinc 204457469 Jan 26 20:39 shared/HITS.pool.root.1
[2026-01-26 20:40:54]  *** Contents of shared directory: ***
[2026-01-26 20:40:54] total 460504
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc 264055385 Jan 26 16:41 ATLAS.root_0
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc    597760 Jan 26 16:41 input.tar.gz
[2026-01-26 20:40:54] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:41 start_atlas.sh
[2026-01-26 20:40:54] -rw------- 1 boinc boinc 204457469 Jan 26 20:39 HITS.pool.root.1
[2026-01-26 20:40:54] -rw------- 1 boinc boinc   2416640 Jan 26 20:40 result.tar.gz
20:40:56 (625502): run_atlas exited; CPU time 56082.713161
20:40:56 (625502): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN