Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:32 (295418): wrapper (7.7.26015): starting
16:29:32 (295418): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 16:29:32] Arguments: --nthreads 4
[2026-01-27 16:29:32] Threads: 4
[2026-01-27 16:29:32] Checking for CVMFS
[2026-01-27 16:29:32] No cvmfs_config command found, will try listing directly
[2026-01-27 16:29:32] CVMFS is ok
[2026-01-27 16:29:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 16:29:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 16:29:32] Further information can be found at the LHC@home message board.
[2026-01-27 16:29:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 16:29:32] Checking for apptainer binary...
[2026-01-27 16:29:32] which: no apptainer in ((null))
[2026-01-27 16:29:32] apptainer is not installed, using version from CVMFS
[2026-01-27 16:29:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 16:29:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-27 16:29:32] apptainer works
[2026-01-27 16:29:32] Set ATHENA_PROC_NUMBER=4
[2026-01-27 16:29:32] Set ATHENA_CORE_NUMBER=4
[2026-01-27 16:29:32] Starting ATLAS job with PandaID=6983326983
[2026-01-27 16:29:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 19:11:59]  *** The last 200 lines of the pilot log: ***
[2026-01-27 19:11:59] 2026-01-27 18:10:19,632 | INFO     | extracted standard info from prmon json
[2026-01-27 19:11:59] 2026-01-27 18:10:19,632 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 19:11:59] 2026-01-27 18:10:19,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 19:11:59] 2026-01-27 18:10:19,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 19:11:59] 2026-01-27 18:10:19,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 19:11:59] 2026-01-27 18:10:19,636 | INFO     | fitting pss+swap vs Time
[2026-01-27 19:11:59] 2026-01-27 18:10:19,637 | INFO     | sum of square deviations: 1223016419.5
[2026-01-27 19:11:59] 2026-01-27 18:10:19,638 | INFO     | sum of deviations: -2398947060.999996
[2026-01-27 19:11:59] 2026-01-27 18:10:19,638 | INFO     | mean x: 1769532611.5
[2026-01-27 19:11:59] 2026-01-27 18:10:19,638 | INFO     | mean y: 2321312.481012658
[2026-01-27 19:11:59] 2026-01-27 18:10:19,638 | INFO     | intersect: 3473260042.3445435
[2026-01-27 19:11:59] 2026-01-27 18:10:19,639 | INFO     | chi2: 2.0557441915580084
[2026-01-27 19:11:59] 2026-01-27 18:10:19,639 | INFO     | sum of square deviations: 1110539892.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,640 | INFO     | sum of deviations: 7260329800.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,640 | INFO     | mean x: 1769532459.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,640 | INFO     | mean y: 2334071.3921568627
[2026-01-27 19:11:59] 2026-01-27 18:10:19,640 | INFO     | intersect: -11566263632.025578
[2026-01-27 19:11:59] 2026-01-27 18:10:19,641 | INFO     | chi2: 1.2904289372662279
[2026-01-27 19:11:59] 2026-01-27 18:10:19,641 | INFO     | current chi2=1.2904289372662279 (change=37.22813652761743 %)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,641 | INFO     | sum of square deviations: 1005179777.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,642 | INFO     | sum of deviations: 7039324268.499999
[2026-01-27 19:11:59] 2026-01-27 18:10:19,642 | INFO     | mean x: 1769532306.5
[2026-01-27 19:11:59] 2026-01-27 18:10:19,642 | INFO     | mean y: 2333751.4121621624
[2026-01-27 19:11:59] 2026-01-27 18:10:19,642 | INFO     | intersect: -12389789522.512625
[2026-01-27 19:11:59] 2026-01-27 18:10:19,643 | INFO     | chi2: 1.2915036261428068
[2026-01-27 19:11:59] 2026-01-27 18:10:19,643 | INFO     | current chi2=1.2915036261428068 (change=-0.08328152334026528 %)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,643 | INFO     | right removable region: 147
[2026-01-27 19:11:59] 2026-01-27 18:10:19,643 | INFO     | sum of square deviations: 1110539892.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,644 | INFO     | sum of deviations: -20340400468.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,644 | INFO     | mean x: 1769532764.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,644 | INFO     | mean y: 2345191.22875817
[2026-01-27 19:11:59] 2026-01-27 18:10:19,644 | INFO     | intersect: 32412711824.872334
[2026-01-27 19:11:59] 2026-01-27 18:10:19,645 | INFO     | chi2: 0.8204875649976737
[2026-01-27 19:11:59] 2026-01-27 18:10:19,645 | INFO     | current chi2=0.8204875649976737 (change=60.08805140410771 %)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,645 | INFO     | sum of square deviations: 1005179777.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,646 | INFO     | sum of deviations: -18360711378.499996
[2026-01-27 19:11:59] 2026-01-27 18:10:19,646 | INFO     | mean x: 1769532916.5
[2026-01-27 19:11:59] 2026-01-27 18:10:19,646 | INFO     | mean y: 2342318.993243243
[2026-01-27 19:11:59] 2026-01-27 18:10:19,646 | INFO     | intersect: 32324802338.612038
[2026-01-27 19:11:59] 2026-01-27 18:10:19,647 | INFO     | chi2: 0.8202674023990253
[2026-01-27 19:11:59] 2026-01-27 18:10:19,647 | INFO     | current chi2=0.8202674023990253 (change=0.02683314263867687 %)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,647 | INFO     | left removable region: 20
[2026-01-27 19:11:59] 2026-01-27 18:10:19,647 | INFO     | sum of square deviations: 635130048.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,648 | INFO     | sum of deviations: -4663638673.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,648 | INFO     | mean x: 1769532886.0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,648 | INFO     | mean y: 2350072.023622047
[2026-01-27 19:11:59] 2026-01-27 18:10:19,649 | INFO     | intersect: 12995692185.629465
[2026-01-27 19:11:59] 2026-01-27 18:10:19,649 | INFO     | chi2: 0.022122245820090643
[2026-01-27 19:11:59] 2026-01-27 18:10:19,649 | INFO     | current memory leak: -7.34 B/s (using 127 data points, chi2=0.02)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,650 | INFO     | could have reported an average CPU frequency of 2729 MHz (9 samples)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,650 | INFO     | ..............................
[2026-01-27 19:11:59] 2026-01-27 18:10:19,650 | INFO     | . Timing measurements:
[2026-01-27 19:11:59] 2026-01-27 18:10:19,650 | INFO     | . get job = 0 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,650 | INFO     | . initial setup = 8 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | . payload setup = 8 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | . stage-in = 0 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | . payload execution = 9595 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | . stage-out = 0 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | . log creation = 0 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,651 | INFO     | ..............................
[2026-01-27 19:11:59] 2026-01-27 18:10:19,746 | INFO     | 
[2026-01-27 19:11:59] 2026-01-27 18:10:19,747 | INFO     | job summary report
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | --------------------------------------------------
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | PanDA job id: 6983326983
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | task id: 48318034
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | errors: (none)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | pilot state: finished 
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | transexitcode: 0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | exeerrorcode: 0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,750 | INFO     | exeerrordiag: 
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | exitcode: 0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | exitmsg: OK
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | cpuconsumptiontime: 37299 s
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | nevents: 400
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | neventsw: 0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | pid: 306076
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | pgrp: 306076
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | corecount: 4
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | event service: False
[2026-01-27 19:11:59] 2026-01-27 18:10:19,751 | INFO     | sizes: {0: 2283947, 1: 2284237, 11: 2284237, 9608: 2313194, 9610: 2322216, 9611: 2322272, 9613: 2322658}
[2026-01-27 19:11:59] 2026-01-27 18:10:19,752 | INFO     | --------------------------------------------------
[2026-01-27 19:11:59] 2026-01-27 18:10:19,752 | INFO     | 
[2026-01-27 19:11:59] 2026-01-27 18:10:19,752 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-27 19:11:59] 2026-01-27 18:10:19,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 19:11:59] 2026-01-27 18:10:19,787 | INFO     | job 6983326983 has completed (purged errors)
[2026-01-27 19:11:59] 2026-01-27 18:10:19,788 | INFO     | overall cleanup function is called
[2026-01-27 19:11:59] 2026-01-27 18:10:19,974 | WARNING  | process 306076 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 19:11:59] 2026-01-27 18:10:20,623 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 19:11:59] 2026-01-27 18:10:20,801 | INFO     | --- collectZombieJob: --- 10, [306076]
[2026-01-27 19:11:59] 2026-01-27 18:10:20,803 | INFO     | zombie collector waiting for pid 306076
[2026-01-27 19:11:59] 2026-01-27 18:10:20,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 19:11:59] 2026-01-27 18:10:20,803 | INFO     | collected zombie processes
[2026-01-27 19:11:59] 2026-01-27 18:10:20,803 | INFO     | will attempt to kill all subprocesses of pid=306076
[2026-01-27 19:11:59] 2026-01-27 18:10:22,788 | INFO     | number of running child processes to parent process 306076: 1
[2026-01-27 19:11:59] 2026-01-27 18:10:22,788 | INFO     | maximum number of monitored processes: 6
[2026-01-27 19:11:59] 2026-01-27 18:10:22,788 | INFO     | aborting job monitoring since job object (job id=6983326983) has expired
[2026-01-27 19:11:59] 2026-01-27 18:10:22,938 | INFO     | process IDs to be killed: [306076] (in reverse order)
[2026-01-27 19:11:59] 2026-01-27 18:10:23,182 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 19:11:59] 2026-01-27 18:10:23,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 19:11:59] 2026-01-27 18:10:23,221 | INFO     | did not find any defunct processes belonging to 306076
[2026-01-27 19:11:59] 2026-01-27 18:10:23,260 | INFO     | did not find any defunct processes belonging to 306076
[2026-01-27 19:11:59] 2026-01-27 18:10:23,260 | INFO     | ready for new job
[2026-01-27 19:11:59] 2026-01-27 18:10:23,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 19:11:59] 2026-01-27 18:10:23,263 | INFO     | **************************************
[2026-01-27 19:11:59] 2026-01-27 18:10:23,264 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 19:11:59] 2026-01-27 18:10:23,264 | INFO     | **************************************
[2026-01-27 19:11:59] 2026-01-27 18:10:23,264 | INFO     | 
[2026-01-27 19:11:59] 2026-01-27 18:10:23,274 | INFO     | architecture information:
[2026-01-27 19:11:59] 2026-01-27 18:10:23,274 | INFO     | executing command: cat /etc/os-release
[2026-01-27 19:11:59] 2026-01-27 18:10:23,297 | INFO     | cat /etc/os-release:
[2026-01-27 19:11:59] NAME="CentOS Linux"
[2026-01-27 19:11:59] VERSION="7 (Core)"
[2026-01-27 19:11:59] ID="centos"
[2026-01-27 19:11:59] ID_LIKE="rhel fedora"
[2026-01-27 19:11:59] VERSION_ID="7"
[2026-01-27 19:11:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 19:11:59] ANSI_COLOR="0;31"
[2026-01-27 19:11:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 19:11:59] HOME_URL="https://www.centos.org/"
[2026-01-27 19:11:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 19:11:59] 
[2026-01-27 19:11:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 19:11:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 19:11:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 19:11:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 19:11:59] 
[2026-01-27 19:11:59] 2026-01-27 18:10:23,298 | INFO     | **************************************
[2026-01-27 19:11:59] 2026-01-27 18:10:23,801 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-27 19:11:59] 2026-01-27 18:10:23,822 | INFO     | sufficient remaining disk space (3286953361408 B)
[2026-01-27 19:11:59] 2026-01-27 18:10:23,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 19:11:59] 2026-01-27 18:10:23,823 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 19:11:59] 2026-01-27 18:10:23,823 | INFO     | update_server=False
[2026-01-27 19:11:59] 2026-01-27 18:10:23,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 19:11:59] 2026-01-27 18:10:23,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:11:59] 2026-01-27 18:10:23,824 | INFO     | aborting loop
[2026-01-27 19:11:59] 2026-01-27 18:10:23,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 19:11:59] 2026-01-27 18:10:24,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 19:11:59] 2026-01-27 18:10:24,495 | INFO     | all data control threads have been joined
[2026-01-27 19:11:59] 2026-01-27 18:10:24,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 19:11:59] 2026-01-27 18:10:24,829 | INFO     | [job] retrieve thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:24,829 | INFO     | [job] job monitor thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:24,910 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,014 | INFO     | all payload control threads have been joined
[2026-01-27 19:11:59] 2026-01-27 18:10:25,095 | INFO     | [payload] failed_post thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,115 | INFO     | all job control threads have been joined
[2026-01-27 19:11:59] 2026-01-27 18:10:25,233 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,378 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,500 | INFO     | [data] control thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,652 | INFO     | [job] validate thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,760 | INFO     | [job] queue monitor thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,899 | INFO     | [payload] validate_post thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:25,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:26,019 | INFO     | [payload] control thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:26,121 | INFO     | [job] control thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:26,296 | INFO     | [data] copytool_in thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:26,427 | INFO     | [data] copytool_out thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:27,952 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 19:11:59] 2026-01-27 18:10:52,060 | INFO     | PID=299728 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 19:11:59] 2026-01-27 18:10:52,060 | INFO     | .. there are 9 such processes running
[2026-01-27 19:11:59] 2026-01-27 18:10:52,062 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 19:11:59] 2026-01-27 18:10:52,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 19:11:59] 2026-01-27 18:10:52,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 19:11:59] 2026-01-27 18:11:10,974 | INFO     | [monitor] cgroup control has ended
[2026-01-27 19:11:59] 2026-01-27 18:11:12,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23239684413248)>', '<ExcThread(monitor, started 23239446509312)>']
[2026-01-27 19:11:59] 2026-01-27 18:11:13,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 19:11:59] 2026-01-27 18:11:13,162 | INFO     | [monitor] control thread has ended
[2026-01-27 19:11:59] 2026-01-27 18:11:17,640 | INFO     | all workflow threads have been joined
[2026-01-27 19:11:59] 2026-01-27 18:11:17,640 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 19:11:59] 2026-01-27 18:11:17,640 | INFO     | traces error code: 0
[2026-01-27 19:11:59] 2026-01-27 18:11:17,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 19:11:59] 2026-01-27 18:11:17,794 [wrapper] ==== pilot stdout END ====
[2026-01-27 19:11:59] 2026-01-27 18:11:17,798 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 19:11:59] 2026-01-27 18:11:17,801 [wrapper] pilotpid: 299728
[2026-01-27 19:11:59] 2026-01-27 18:11:17,805 [wrapper] Pilot exit status: 0
[2026-01-27 19:11:59] 2026-01-27 18:11:17,821 [wrapper] pandaids: 6983326983
[2026-01-27 19:11:59] 2026-01-27 18:11:17,992 [wrapper] cleanup supervisor_pilot  509712 299729
[2026-01-27 19:11:59] 2026-01-27 18:11:17,996 [wrapper] Test setup, not cleaning
[2026-01-27 19:11:59] 2026-01-27 18:11:18,000 [wrapper] apfmon messages muted
[2026-01-27 19:11:59] 2026-01-27 18:11:18,005 [wrapper] ==== wrapper stdout END ====
[2026-01-27 19:11:59] 2026-01-27 18:11:18,008 [wrapper] ==== wrapper stderr END ====
[2026-01-27 19:11:59]  *** Error codes and diagnostics ***
[2026-01-27 19:11:59]     "exeErrorCode": 0,
[2026-01-27 19:11:59]     "exeErrorDiag": "",
[2026-01-27 19:11:59]     "pilotErrorCode": 0,
[2026-01-27 19:11:59]     "pilotErrorDiag": "",
[2026-01-27 19:11:59]  *** Listing of results directory ***
[2026-01-27 19:11:59] total 669548
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-27 19:11:59] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:50 queuedata.json
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc       100 Jan 27 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 19:11:59] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 16:29 run_atlas
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc       105 Jan 27 16:29 job.xml
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc 492187386 Jan 27 16:29 EVNT.48318032._000016.pool.root.1
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc      6692 Jan 27 16:29 init_data.xml
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:29 start_atlas.sh
[2026-01-27 19:11:59] drwxrwx--x 2 boinc boinc      4096 Jan 27 16:29 shared
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc    597757 Jan 27 16:29 input.tar.gz
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc         0 Jan 27 16:29 boinc_lockfile
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc      2531 Jan 27 16:29 pandaJob.out
[2026-01-27 19:11:59] -rw------- 1 boinc boinc   1005162 Jan 27 16:29 agis_schedconf.cvmfs.json
[2026-01-27 19:11:59] -rw------- 1 boinc boinc   1516246 Jan 27 16:29 agis_ddmendpoints.agis.ALL.json
[2026-01-27 19:11:59] -rw------- 1 boinc boinc       444 Jan 27 16:29 workernode_map.json
[2026-01-27 19:11:59] drwx------ 5 boinc boinc      4096 Jan 27 16:29 pilot3
[2026-01-27 19:11:59] -rw------- 1 boinc boinc 186063356 Jan 27 19:09 HITS.48318034._000788.pool.root.1
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc       529 Jan 27 19:09 boinc_task_state.xml
[2026-01-27 19:11:59] -rw------- 1 boinc boinc      1032 Jan 27 19:10 memory_monitor_summary.json
[2026-01-27 19:11:59] -rw------- 1 boinc boinc    364333 Jan 27 19:10 log.48318034._000788.job.log.tgz.1
[2026-01-27 19:11:59] -rw------- 1 boinc boinc      6356 Jan 27 19:10 heartbeat.json
[2026-01-27 19:11:59] -rw------- 1 boinc boinc        95 Jan 27 19:10 pilot_heartbeat.json
[2026-01-27 19:11:59] -rw------- 1 boinc boinc      4831 Jan 27 19:11 pilotlog.txt
[2026-01-27 19:11:59] -rw------- 1 boinc boinc   1349833 Jan 27 19:11 log.48318034._000788.job.log.1
[2026-01-27 19:11:59] -rw------- 1 boinc boinc       357 Jan 27 19:11 output.list
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc       620 Jan 27 19:11 runtime_log
[2026-01-27 19:11:59] -rw------- 1 boinc boinc   1730560 Jan 27 19:11 result.tar.gz
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc      9221 Jan 27 19:11 runtime_log.err
[2026-01-27 19:11:59] -rw------- 1 boinc boinc       663 Jan 27 19:11 TsdKDmuLK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP67KDm6M1rYm.diag
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc        26 Jan 27 19:11 wrapper_checkpoint.txt
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc      8192 Jan 27 19:11 boinc_mmap_file
[2026-01-27 19:11:59] -rw-r--r-- 1 boinc boinc     20853 Jan 27 19:11 stderr.txt
[2026-01-27 19:11:59] HITS file was successfully produced:
[2026-01-27 19:11:59] -rw------- 1 boinc boinc 186063356 Jan 27 19:09 shared/HITS.pool.root.1
[2026-01-27 19:11:59]  *** Contents of shared directory: ***
[2026-01-27 19:11:59] total 664656
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc 492187386 Jan 27 16:29 ATLAS.root_0
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:29 start_atlas.sh
[2026-01-27 19:11:59] -rw-r--r-- 2 boinc boinc    597757 Jan 27 16:29 input.tar.gz
[2026-01-27 19:11:59] -rw------- 1 boinc boinc 186063356 Jan 27 19:09 HITS.pool.root.1
[2026-01-27 19:11:59] -rw------- 1 boinc boinc   1730560 Jan 27 19:11 result.tar.gz
19:12:00 (295418): run_atlas exited; CPU time 37905.063506
19:12:00 (295418): called boinc_finish(0)

</stderr_txt>
]]>

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