Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:13:47 (719905): wrapper (7.7.26015): starting
22:13:47 (719905): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 22:13:47] Arguments: --nthreads 4
[2026-01-27 22:13:47] Threads: 4
[2026-01-27 22:13:47] Checking for CVMFS
[2026-01-27 22:13:47] No cvmfs_config command found, will try listing directly
[2026-01-27 22:13:47] CVMFS is ok
[2026-01-27 22:13:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 22:13:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 22:13:47] Further information can be found at the LHC@home message board.
[2026-01-27 22:13:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 22:13:47] Checking for apptainer binary...
[2026-01-27 22:13:47] which: no apptainer in ((null))
[2026-01-27 22:13:47] apptainer is not installed, using version from CVMFS
[2026-01-27 22:13:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 22:13:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-27 22:13:48] apptainer works
[2026-01-27 22:13:48] Set ATHENA_PROC_NUMBER=4
[2026-01-27 22:13:48] Set ATHENA_CORE_NUMBER=4
[2026-01-27 22:13:48] Starting ATLAS job with PandaID=6983326785
[2026-01-27 22:13:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 00:58:58]  *** The last 200 lines of the pilot log: ***
[2026-01-28 00:58:58] 2026-01-27 23:57:34,784 | INFO     | total number of processed events: 400 (read)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,817 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6983326785/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,817 | INFO     | extracted standard info from prmon json
[2026-01-28 00:58:58] 2026-01-27 23:57:34,817 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 00:58:58] 2026-01-27 23:57:34,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 00:58:58] 2026-01-27 23:57:34,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 00:58:58] 2026-01-27 23:57:34,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 00:58:58] 2026-01-27 23:57:34,822 | INFO     | fitting pss+swap vs Time
[2026-01-28 00:58:58] 2026-01-27 23:57:34,822 | INFO     | sum of square deviations: 1294014960.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,823 | INFO     | sum of deviations: 6460583260.999998
[2026-01-28 00:58:58] 2026-01-27 23:57:34,823 | INFO     | mean x: 1769553359.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,823 | INFO     | mean y: 2311721.645962733
[2026-01-28 00:58:58] 2026-01-27 23:57:34,823 | INFO     | intersect: -8832475482.515663
[2026-01-28 00:58:58] 2026-01-27 23:57:34,824 | INFO     | chi2: 2.0897783810194577
[2026-01-28 00:58:58] 2026-01-27 23:57:34,824 | INFO     | sum of square deviations: 1177156955.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,825 | INFO     | sum of deviations: 15805399998.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,825 | INFO     | mean x: 1769553206.5
[2026-01-28 00:58:58] 2026-01-27 23:57:34,826 | INFO     | mean y: 2323590.641025641
[2026-01-28 00:58:58] 2026-01-27 23:57:34,826 | INFO     | intersect: -23757036728.880676
[2026-01-28 00:58:58] 2026-01-27 23:57:34,826 | INFO     | chi2: 1.3274417651081225
[2026-01-28 00:58:58] 2026-01-27 23:57:34,826 | INFO     | current chi2=1.3274417651081225 (change=36.47930435281104 %)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,827 | INFO     | sum of square deviations: 1067554900.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | sum of deviations: 15041543724.000015
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | mean x: 1769553054.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | mean y: 2322527.4569536424
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | intersect: -24930174746.152824
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | chi2: 1.328721330674117
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | current chi2=1.328721330674117 (change=-0.09639334844118669 %)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,828 | INFO     | right removable region: 150
[2026-01-28 00:58:58] 2026-01-27 23:57:34,829 | INFO     | sum of square deviations: 1177156955.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,829 | INFO     | sum of deviations: -13408756663.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,830 | INFO     | mean x: 1769553511.5
[2026-01-28 00:58:58] 2026-01-27 23:57:34,830 | INFO     | mean y: 2337217.628205128
[2026-01-28 00:58:58] 2026-01-27 23:57:34,830 | INFO     | intersect: 20158963177.3845
[2026-01-28 00:58:58] 2026-01-27 23:57:34,830 | INFO     | chi2: 0.7947908308853162
[2026-01-28 00:58:58] 2026-01-27 23:57:34,830 | INFO     | current chi2=0.7947908308853162 (change=61.967697718377536 %)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,831 | INFO     | sum of square deviations: 1067554900.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,831 | INFO     | sum of deviations: -12181739711.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,831 | INFO     | mean x: 1769553664.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | mean y: 2335480.8145695366
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | intersect: 20194498094.17933
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | chi2: 0.791677647026673
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | current chi2=0.791677647026673 (change=0.3916985120695795 %)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | left removable region: 20
[2026-01-28 00:58:58] 2026-01-27 23:57:34,832 | INFO     | sum of square deviations: 681212772.5
[2026-01-28 00:58:58] 2026-01-27 23:57:34,833 | INFO     | sum of deviations: -1900257726.0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,833 | INFO     | mean x: 1769553633.5
[2026-01-28 00:58:58] 2026-01-27 23:57:34,833 | INFO     | mean y: 2346683.6461538463
[2026-01-28 00:58:58] 2026-01-27 23:57:34,833 | INFO     | intersect: 4938554722.27295
[2026-01-28 00:58:58] 2026-01-27 23:57:34,834 | INFO     | chi2: 0.0028710786896236143
[2026-01-28 00:58:58] 2026-01-27 23:57:34,834 | INFO     | current memory leak: -2.79 B/s (using 130 data points, chi2=0.00)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,834 | INFO     | could have reported an average CPU frequency of 2709 MHz (9 samples)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | ..............................
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . Timing measurements:
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . get job = 0 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . initial setup = 8 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . payload setup = 9 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . stage-in = 0 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . payload execution = 9773 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . stage-out = 0 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | . log creation = 0 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,835 | INFO     | ..............................
[2026-01-28 00:58:58] 2026-01-27 23:57:34,935 | INFO     | 
[2026-01-28 00:58:58] 2026-01-27 23:57:34,937 | INFO     | job summary report
[2026-01-28 00:58:58] 2026-01-27 23:57:34,937 | INFO     | --------------------------------------------------
[2026-01-28 00:58:58] 2026-01-27 23:57:34,937 | INFO     | PanDA job id: 6983326785
[2026-01-28 00:58:58] 2026-01-27 23:57:34,937 | INFO     | task id: 48318034
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | errors: (none)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | pilot state: finished 
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | transexitcode: 0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | exeerrorcode: 0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | exeerrordiag: 
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | exitcode: 0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | exitmsg: OK
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | cpuconsumptiontime: 37855 s
[2026-01-28 00:58:58] 2026-01-27 23:57:34,938 | INFO     | nevents: 400
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | neventsw: 0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | pid: 729296
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | pgrp: 729296
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | corecount: 4
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | event service: False
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | sizes: {0: 2283776, 1: 2284237, 11: 2284237, 9785: 2313222, 9787: 2322244, 9789: 2322300, 9792: 2322714}
[2026-01-28 00:58:58] 2026-01-27 23:57:34,939 | INFO     | --------------------------------------------------
[2026-01-28 00:58:58] 2026-01-27 23:57:34,940 | INFO     | 
[2026-01-28 00:58:58] 2026-01-27 23:57:34,940 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-28 00:58:58] 2026-01-27 23:57:34,975 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,975 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,977 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 00:58:58] 2026-01-27 23:57:34,978 | INFO     | job 6983326785 has completed (purged errors)
[2026-01-28 00:58:58] 2026-01-27 23:57:34,978 | INFO     | overall cleanup function is called
[2026-01-28 00:58:58] 2026-01-27 23:57:35,113 | INFO     | number of running child processes to parent process 729296: 1
[2026-01-28 00:58:58] 2026-01-27 23:57:35,113 | INFO     | maximum number of monitored processes: 6
[2026-01-28 00:58:58] 2026-01-27 23:57:35,113 | INFO     | aborting job monitoring since job object (job id=6983326785) has expired
[2026-01-28 00:58:58] 2026-01-27 23:57:35,991 | INFO     | --- collectZombieJob: --- 10, [729296]
[2026-01-28 00:58:58] 2026-01-27 23:57:35,992 | INFO     | zombie collector waiting for pid 729296
[2026-01-28 00:58:58] 2026-01-27 23:57:35,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 00:58:58] 2026-01-27 23:57:35,992 | INFO     | collected zombie processes
[2026-01-28 00:58:58] 2026-01-27 23:57:35,992 | INFO     | will attempt to kill all subprocesses of pid=729296
[2026-01-28 00:58:58] 2026-01-27 23:57:36,835 | INFO     | process IDs to be killed: [729296] (in reverse order)
[2026-01-28 00:58:58] 2026-01-27 23:57:37,109 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 00:58:58] 2026-01-27 23:57:37,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 00:58:58] 2026-01-27 23:57:37,144 | INFO     | did not find any defunct processes belonging to 729296
[2026-01-28 00:58:58] 2026-01-27 23:57:37,177 | INFO     | did not find any defunct processes belonging to 729296
[2026-01-28 00:58:58] 2026-01-27 23:57:37,177 | INFO     | ready for new job
[2026-01-28 00:58:58] 2026-01-27 23:57:37,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 00:58:58] 2026-01-27 23:57:37,180 | INFO     | **************************************
[2026-01-28 00:58:58] 2026-01-27 23:57:37,184 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 00:58:58] 2026-01-27 23:57:37,184 | INFO     | **************************************
[2026-01-28 00:58:58] 2026-01-27 23:57:37,184 | INFO     | 
[2026-01-28 00:58:58] 2026-01-27 23:57:37,192 | INFO     | architecture information:
[2026-01-28 00:58:58] 2026-01-27 23:57:37,193 | INFO     | executing command: cat /etc/os-release
[2026-01-28 00:58:58] 2026-01-27 23:57:37,215 | INFO     | cat /etc/os-release:
[2026-01-28 00:58:58] NAME="CentOS Linux"
[2026-01-28 00:58:58] VERSION="7 (Core)"
[2026-01-28 00:58:58] ID="centos"
[2026-01-28 00:58:58] ID_LIKE="rhel fedora"
[2026-01-28 00:58:58] VERSION_ID="7"
[2026-01-28 00:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 00:58:58] ANSI_COLOR="0;31"
[2026-01-28 00:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 00:58:58] HOME_URL="https://www.centos.org/"
[2026-01-28 00:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 00:58:58] 
[2026-01-28 00:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 00:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 00:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 00:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 00:58:58] 
[2026-01-28 00:58:58] 2026-01-27 23:57:37,216 | INFO     | **************************************
[2026-01-28 00:58:58] 2026-01-27 23:57:37,719 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-28 00:58:58] 2026-01-27 23:57:37,746 | INFO     | sufficient remaining disk space (3301609308160 B)
[2026-01-28 00:58:58] 2026-01-27 23:57:37,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 00:58:58] 2026-01-27 23:57:37,747 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 00:58:58] 2026-01-27 23:57:37,747 | INFO     | update_server=False
[2026-01-28 00:58:58] 2026-01-27 23:57:37,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 00:58:58] 2026-01-27 23:57:37,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 00:58:58] 2026-01-27 23:57:37,969 | INFO     | all data control threads have been joined
[2026-01-28 00:58:58] 2026-01-27 23:57:38,005 | INFO     | all payload control threads have been joined
[2026-01-28 00:58:58] 2026-01-27 23:57:38,065 | INFO     | all job control threads have been joined
[2026-01-28 00:58:58] 2026-01-27 23:57:38,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 00:58:58] 2026-01-27 23:57:38,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 00:58:58] 2026-01-27 23:57:38,622 | INFO     | aborting loop
[2026-01-28 00:58:58] 2026-01-27 23:57:38,752 | INFO     | [job] retrieve thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:38,779 | INFO     | [payload] validate_post thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:38,835 | INFO     | [data] copytool_in thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:38,974 | INFO     | [data] control thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,005 | INFO     | [job] validate thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,011 | INFO     | [payload] control thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,070 | INFO     | [job] control thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,213 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,619 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,627 | INFO     | [job] job monitor thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,664 | INFO     | [payload] failed_post thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,795 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:39,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 00:58:58] 2026-01-27 23:57:40,337 | INFO     | [data] copytool_out thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:40,951 | INFO     | [job] queue monitor thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:57:41,882 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 00:58:58] 2026-01-27 23:58:08,689 | INFO     | PID=724241 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 00:58:58] 2026-01-27 23:58:08,689 | INFO     | .. there are 8 such processes running
[2026-01-28 00:58:58] 2026-01-27 23:58:08,689 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 00:58:58] 2026-01-27 23:58:08,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 00:58:58] 2026-01-27 23:58:08,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 00:58:58] 2026-01-27 23:58:26,195 | INFO     | [monitor] cgroup control has ended
[2026-01-28 00:58:58] 2026-01-27 23:58:26,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23087284119360)>', '<ExcThread(monitor, started 23087042270976)>']
[2026-01-28 00:58:58] 2026-01-27 23:58:26,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 00:58:58] 2026-01-27 23:58:26,768 | INFO     | [monitor] control thread has ended
[2026-01-28 00:58:58] 2026-01-27 23:58:31,569 | INFO     | all workflow threads have been joined
[2026-01-28 00:58:58] 2026-01-27 23:58:31,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 00:58:58] 2026-01-27 23:58:31,570 | INFO     | traces error code: 0
[2026-01-28 00:58:58] 2026-01-27 23:58:31,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 00:58:58] 2026-01-27 23:58:31,769 [wrapper] ==== pilot stdout END ====
[2026-01-28 00:58:58] 2026-01-27 23:58:31,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 00:58:58] 2026-01-27 23:58:31,778 [wrapper] pilotpid: 724241
[2026-01-28 00:58:58] 2026-01-27 23:58:31,782 [wrapper] Pilot exit status: 0
[2026-01-28 00:58:58] 2026-01-27 23:58:31,798 [wrapper] pandaids: 6983326785
[2026-01-28 00:58:58] 2026-01-27 23:58:31,990 [wrapper] cleanup supervisor_pilot  889197 724242
[2026-01-28 00:58:58] 2026-01-27 23:58:31,997 [wrapper] Test setup, not cleaning
[2026-01-28 00:58:58] 2026-01-27 23:58:32,001 [wrapper] apfmon messages muted
[2026-01-28 00:58:58] 2026-01-27 23:58:32,005 [wrapper] ==== wrapper stdout END ====
[2026-01-28 00:58:58] 2026-01-27 23:58:32,009 [wrapper] ==== wrapper stderr END ====
[2026-01-28 00:58:58]  *** Error codes and diagnostics ***
[2026-01-28 00:58:58]     "exeErrorCode": 0,
[2026-01-28 00:58:58]     "exeErrorDiag": "",
[2026-01-28 00:58:58]     "pilotErrorCode": 0,
[2026-01-28 00:58:58]     "pilotErrorDiag": "",
[2026-01-28 00:58:58]  *** Listing of results directory ***
[2026-01-28 00:58:58] total 679108
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:48 queuedata.json
[2026-01-28 00:58:58] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc       100 Jan 27 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 00:58:58] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 22:13 run_atlas
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc       105 Jan 27 22:13 job.xml
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc      6692 Jan 27 22:13 init_data.xml
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc 498549734 Jan 27 22:13 EVNT.48318032._000012.pool.root.1
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc     15845 Jan 27 22:13 start_atlas.sh
[2026-01-28 00:58:58] drwxrwx--x 2 boinc boinc      4096 Jan 27 22:13 shared
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc    597765 Jan 27 22:13 input.tar.gz
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc         0 Jan 27 22:13 boinc_lockfile
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc      2531 Jan 27 22:13 pandaJob.out
[2026-01-28 00:58:58] -rw------- 1 boinc boinc   1005244 Jan 27 22:14 agis_schedconf.cvmfs.json
[2026-01-28 00:58:58] -rw------- 1 boinc boinc   1516246 Jan 27 22:14 agis_ddmendpoints.agis.ALL.json
[2026-01-28 00:58:58] -rw------- 1 boinc boinc       444 Jan 27 22:14 workernode_map.json
[2026-01-28 00:58:58] drwx------ 5 boinc boinc      4096 Jan 27 22:14 pilot3
[2026-01-28 00:58:58] -rw------- 1 boinc boinc 189443883 Jan 28 00:56 HITS.48318034._000590.pool.root.1
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc       529 Jan 28 00:57 boinc_task_state.xml
[2026-01-28 00:58:58] -rw------- 1 boinc boinc      1042 Jan 28 00:57 memory_monitor_summary.json
[2026-01-28 00:58:58] -rw------- 1 boinc boinc    368457 Jan 28 00:57 log.48318034._000590.job.log.tgz.1
[2026-01-28 00:58:58] -rw------- 1 boinc boinc      6356 Jan 28 00:57 heartbeat.json
[2026-01-28 00:58:58] -rw------- 1 boinc boinc        95 Jan 28 00:57 pilot_heartbeat.json
[2026-01-28 00:58:58] -rw------- 1 boinc boinc      4831 Jan 28 00:58 pilotlog.txt
[2026-01-28 00:58:58] -rw------- 1 boinc boinc   1368943 Jan 28 00:58 log.48318034._000590.job.log.1
[2026-01-28 00:58:58] -rw------- 1 boinc boinc       357 Jan 28 00:58 output.list
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc       620 Jan 28 00:58 runtime_log
[2026-01-28 00:58:58] -rw------- 1 boinc boinc   1751040 Jan 28 00:58 result.tar.gz
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc      9221 Jan 28 00:58 runtime_log.err
[2026-01-28 00:58:58] -rw------- 1 boinc boinc       662 Jan 28 00:58 fp7MDmkLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfS1KDmfAo2Fn.diag
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc        26 Jan 28 00:58 wrapper_checkpoint.txt
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc      8192 Jan 28 00:58 boinc_mmap_file
[2026-01-28 00:58:58] -rw-r--r-- 1 boinc boinc     20835 Jan 28 00:58 stderr.txt
[2026-01-28 00:58:58] HITS file was successfully produced:
[2026-01-28 00:58:58] -rw------- 1 boinc boinc 189443883 Jan 28 00:56 shared/HITS.pool.root.1
[2026-01-28 00:58:58]  *** Contents of shared directory: ***
[2026-01-28 00:58:58] total 674192
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc 498549734 Jan 27 22:13 ATLAS.root_0
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc     15845 Jan 27 22:13 start_atlas.sh
[2026-01-28 00:58:58] -rw-r--r-- 2 boinc boinc    597765 Jan 27 22:13 input.tar.gz
[2026-01-28 00:58:58] -rw------- 1 boinc boinc 189443883 Jan 28 00:56 HITS.pool.root.1
[2026-01-28 00:58:58] -rw------- 1 boinc boinc   1751040 Jan 28 00:58 result.tar.gz
00:58:59 (719905): run_atlas exited; CPU time 38597.813044
00:58:59 (719905): called boinc_finish(0)

</stderr_txt>
]]>

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