Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:46:22 (3958762): wrapper (7.7.26015): starting
10:46:22 (3958762): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 10:46:22] Arguments: --nthreads 4
[2026-01-27 10:46:22] Threads: 4
[2026-01-27 10:46:22] Checking for CVMFS
[2026-01-27 10:46:22] No cvmfs_config command found, will try listing directly
[2026-01-27 10:46:22] CVMFS is ok
[2026-01-27 10:46:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 10:46:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 10:46:22] Further information can be found at the LHC@home message board.
[2026-01-27 10:46:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 10:46:22] Checking for apptainer binary...
[2026-01-27 10:46:22] which: no apptainer in ((null))
[2026-01-27 10:46:22] apptainer is not installed, using version from CVMFS
[2026-01-27 10:46:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 10:46:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-27 10:46:23] apptainer works
[2026-01-27 10:46:23] Set ATHENA_PROC_NUMBER=4
[2026-01-27 10:46:23] Set ATHENA_CORE_NUMBER=4
[2026-01-27 10:46:23] Starting ATLAS job with PandaID=6983326860
[2026-01-27 10:46:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:48:33]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:48:33] 2026-01-27 12:45:15,026 | INFO     | reading metadata from: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6983326860/jobReport.json
[2026-01-27 13:48:33] 2026-01-27 12:45:15,030 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot120/slots/0/workernode_map.json
[2026-01-27 13:48:33] 2026-01-27 12:45:15,030 | INFO     | this job has now completed (state=finished)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,030 | INFO     | log transfer has been attempted: DONE
[2026-01-27 13:48:33] 2026-01-27 12:45:15,030 | INFO     | job 6983326860 has finished - writing final server update
[2026-01-27 13:48:33] 2026-01-27 12:45:15,031 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2220314/.job.ad'
[2026-01-27 13:48:33] 2026-01-27 12:45:15,031 | INFO     | total number of processed events: 400 (read)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,069 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6983326860/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,070 | INFO     | extracted standard info from prmon json
[2026-01-27 13:48:33] 2026-01-27 12:45:15,070 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:48:33] 2026-01-27 12:45:15,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:48:33] 2026-01-27 12:45:15,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:48:33] 2026-01-27 12:45:15,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:48:33] 2026-01-27 12:45:15,074 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:48:33] 2026-01-27 12:45:15,074 | INFO     | sum of square deviations: 1661798600.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,075 | INFO     | sum of deviations: 17433455776.999992
[2026-01-27 13:48:33] 2026-01-27 12:45:15,076 | INFO     | mean x: 1769512543.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,076 | INFO     | mean y: 2311538.5257142857
[2026-01-27 13:48:33] 2026-01-27 12:45:15,076 | INFO     | intersect: -18561140533.968086
[2026-01-27 13:48:33] 2026-01-27 12:45:15,076 | INFO     | chi2: 1.3503522488881585
[2026-01-27 13:48:33] 2026-01-27 12:45:15,077 | INFO     | sum of square deviations: 1523386702.5
[2026-01-27 13:48:33] 2026-01-27 12:45:15,078 | INFO     | sum of deviations: 16821589665.000002
[2026-01-27 13:48:33] 2026-01-27 12:45:15,078 | INFO     | mean x: 1769512390.5
[2026-01-27 13:48:33] 2026-01-27 12:45:15,078 | INFO     | mean y: 2310863.694117647
[2026-01-27 13:48:33] 2026-01-27 12:45:15,078 | INFO     | intersect: -19537055793.02924
[2026-01-27 13:48:33] 2026-01-27 12:45:15,078 | INFO     | chi2: 1.3514637582661746
[2026-01-27 13:48:33] 2026-01-27 12:45:15,079 | INFO     | current chi2=1.3514637582661746 (change=-0.08231255059050396 %)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,079 | INFO     | right removable region: 169
[2026-01-27 13:48:33] 2026-01-27 12:45:15,079 | INFO     | sum of square deviations: 1523386702.5
[2026-01-27 13:48:33] 2026-01-27 12:45:15,080 | INFO     | sum of deviations: -4417752614.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,080 | INFO     | mean x: 1769512695.5
[2026-01-27 13:48:33] 2026-01-27 12:45:15,080 | INFO     | mean y: 2335248.223529412
[2026-01-27 13:48:33] 2026-01-27 12:45:15,080 | INFO     | intersect: 5133842122.494221
[2026-01-27 13:48:33] 2026-01-27 12:45:15,081 | INFO     | chi2: 0.017393228965560573
[2026-01-27 13:48:33] 2026-01-27 12:45:15,081 | INFO     | current chi2=0.017393228965560573 (change=98.7119487541209 %)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,081 | INFO     | sum of square deviations: 1392881930.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,082 | INFO     | sum of deviations: -3301655317.0000014
[2026-01-27 13:48:33] 2026-01-27 12:45:15,082 | INFO     | mean x: 1769512848.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,082 | INFO     | mean y: 2333940.187878788
[2026-01-27 13:48:33] 2026-01-27 12:45:15,083 | INFO     | intersect: 4196746529.8457937
[2026-01-27 13:48:33] 2026-01-27 12:45:15,083 | INFO     | chi2: 0.016535670254244513
[2026-01-27 13:48:33] 2026-01-27 12:45:15,083 | INFO     | current chi2=0.016535670254244513 (change=4.930416962911641 %)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,083 | INFO     | left removable region: 20
[2026-01-27 13:48:33] 2026-01-27 12:45:15,083 | INFO     | sum of square deviations: 1025693650.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,084 | INFO     | sum of deviations: 302233466.9999999
[2026-01-27 13:48:33] 2026-01-27 12:45:15,085 | INFO     | mean x: 1769512970.0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,085 | INFO     | mean y: 2328912.66442953
[2026-01-27 13:48:33] 2026-01-27 12:45:15,085 | INFO     | intersect: -519080223.31351745
[2026-01-27 13:48:33] 2026-01-27 12:45:15,085 | INFO     | chi2: 0.006976598330393772
[2026-01-27 13:48:33] 2026-01-27 12:45:15,085 | INFO     | current memory leak: 0.29 B/s (using 149 data points, chi2=0.01)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | could have reported an average CPU frequency of 2764 MHz (9 samples)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | ..............................
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . Timing measurements:
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . get job = 0 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . initial setup = 9 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . payload setup = 9 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . stage-in = 0 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . payload execution = 10677 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,086 | INFO     | . stage-out = 0 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,087 | INFO     | . log creation = 0 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,087 | INFO     | ..............................
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | job summary report
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | --------------------------------------------------
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | PanDA job id: 6983326860
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | task id: 48318034
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | errors: (none)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,578 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | pilot state: finished 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | transexitcode: 0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | exeerrorcode: 0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | exeerrordiag: 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | exitcode: 0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | exitmsg: OK
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | cpuconsumptiontime: 41281 s
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | nevents: 400
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | neventsw: 0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | pid: 4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | pgrp: 4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | corecount: 4
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | event service: False
[2026-01-27 13:48:33] 2026-01-27 12:45:15,579 | INFO     | sizes: {0: 2283945, 1: 2284207, 11: 2284235, 10691: 2313556, 10692: 2322578, 10694: 2322634, 10696: 2323020}
[2026-01-27 13:48:33] 2026-01-27 12:45:15,580 | INFO     | --------------------------------------------------
[2026-01-27 13:48:33] 2026-01-27 12:45:15,580 | INFO     | 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,580 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-27 13:48:33] 2026-01-27 12:45:15,613 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:48:33] 2026-01-27 12:45:15,616 | INFO     | job 6983326860 has completed (purged errors)
[2026-01-27 13:48:33] 2026-01-27 12:45:15,616 | INFO     | overall cleanup function is called
[2026-01-27 13:48:33] 2026-01-27 12:45:15,649 | INFO     | PID=3974197 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 13:48:33] 2026-01-27 12:45:15,649 | INFO     | .. there are 11 such processes running
[2026-01-27 13:48:33] 2026-01-27 12:45:16,626 | INFO     | --- collectZombieJob: --- 10, [4001014]
[2026-01-27 13:48:33] 2026-01-27 12:45:16,626 | INFO     | zombie collector waiting for pid 4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:16,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:48:33] 2026-01-27 12:45:16,626 | INFO     | collected zombie processes
[2026-01-27 13:48:33] 2026-01-27 12:45:16,626 | INFO     | will attempt to kill all subprocesses of pid=4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:17,321 | INFO     | process IDs to be killed: [4001014] (in reverse order)
[2026-01-27 13:48:33] 2026-01-27 12:45:17,598 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:48:33] 2026-01-27 12:45:17,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:48:33] 2026-01-27 12:45:17,631 | INFO     | did not find any defunct processes belonging to 4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:17,662 | INFO     | did not find any defunct processes belonging to 4001014
[2026-01-27 13:48:33] 2026-01-27 12:45:17,662 | INFO     | ready for new job
[2026-01-27 13:48:33] 2026-01-27 12:45:17,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:48:33] 2026-01-27 12:45:17,665 | INFO     | **************************************
[2026-01-27 13:48:33] 2026-01-27 12:45:17,665 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:48:33] 2026-01-27 12:45:17,665 | INFO     | **************************************
[2026-01-27 13:48:33] 2026-01-27 12:45:17,665 | INFO     | 
[2026-01-27 13:48:33] 2026-01-27 12:45:17,673 | INFO     | architecture information:
[2026-01-27 13:48:33] 2026-01-27 12:45:17,674 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:48:33] 2026-01-27 12:45:17,701 | INFO     | cat /etc/os-release:
[2026-01-27 13:48:33] NAME="CentOS Linux"
[2026-01-27 13:48:33] VERSION="7 (Core)"
[2026-01-27 13:48:33] ID="centos"
[2026-01-27 13:48:33] ID_LIKE="rhel fedora"
[2026-01-27 13:48:33] VERSION_ID="7"
[2026-01-27 13:48:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:48:33] ANSI_COLOR="0;31"
[2026-01-27 13:48:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:48:33] HOME_URL="https://www.centos.org/"
[2026-01-27 13:48:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:48:33] 
[2026-01-27 13:48:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:48:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:48:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:48:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:48:33] 
[2026-01-27 13:48:33] 2026-01-27 12:45:17,701 | INFO     | **************************************
[2026-01-27 13:48:33] 2026-01-27 12:45:18,204 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-27 13:48:33] 2026-01-27 12:45:18,227 | INFO     | sufficient remaining disk space (3266543878144 B)
[2026-01-27 13:48:33] 2026-01-27 12:45:18,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:48:33] 2026-01-27 12:45:18,227 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:48:33] 2026-01-27 12:45:18,227 | INFO     | update_server=False
[2026-01-27 13:48:33] 2026-01-27 12:45:18,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:48:33] 2026-01-27 12:45:18,285 | INFO     | all job control threads have been joined
[2026-01-27 13:48:33] 2026-01-27 12:45:18,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:48:33] 2026-01-27 12:45:18,396 | INFO     | aborting loop
[2026-01-27 13:48:33] 2026-01-27 12:45:18,509 | INFO     | all data control threads have been joined
[2026-01-27 13:48:33] 2026-01-27 12:45:18,511 | INFO     | all payload control threads have been joined
[2026-01-27 13:48:33] 2026-01-27 12:45:18,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:48:33] 2026-01-27 12:45:19,233 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:48:33] 2026-01-27 12:45:19,291 | INFO     | [job] control thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,298 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,361 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,401 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,513 | INFO     | [payload] control thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,514 | INFO     | [data] control thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,621 | INFO     | [job] validate thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:19,666 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:20,091 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:20,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:48:33] 2026-01-27 12:45:20,288 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:20,530 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:21,200 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:21,250 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:22,841 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:28,461 | INFO     | job.realtimelogging is not enabled
[2026-01-27 13:48:33] 2026-01-27 12:45:29,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:48:33] 2026-01-27 12:45:48,755 | INFO     | PID=3974197 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 13:48:33] 2026-01-27 12:45:48,756 | INFO     | .. there are 11 such processes running
[2026-01-27 13:48:33] 2026-01-27 12:45:48,757 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:48:33] 2026-01-27 12:45:48,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:48:33] 2026-01-27 12:45:48,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:48:33] 2026-01-27 12:46:04,712 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:48:33] 2026-01-27 12:46:05,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23315962517312)>', '<ExcThread(monitor, started 23315724121856)>']
[2026-01-27 13:48:33] 2026-01-27 12:46:05,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:48:33] 2026-01-27 12:46:05,842 | INFO     | [monitor] control thread has ended
[2026-01-27 13:48:33] 2026-01-27 12:46:10,370 | INFO     | all workflow threads have been joined
[2026-01-27 13:48:33] 2026-01-27 12:46:10,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:48:33] 2026-01-27 12:46:10,371 | INFO     | traces error code: 0
[2026-01-27 13:48:33] 2026-01-27 12:46:10,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:48:33] 2026-01-27 12:46:10,535 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:48:33] 2026-01-27 12:46:10,539 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:48:33] 2026-01-27 12:46:10,543 [wrapper] pilotpid: 3974197
[2026-01-27 13:48:33] 2026-01-27 12:46:10,547 [wrapper] Pilot exit status: 0
[2026-01-27 13:48:33] 2026-01-27 12:46:10,565 [wrapper] pandaids: 6983326860
[2026-01-27 13:48:33] 2026-01-27 12:46:10,763 [wrapper] cleanup supervisor_pilot   14478 3974198
[2026-01-27 13:48:33] 2026-01-27 12:46:10,767 [wrapper] Test setup, not cleaning
[2026-01-27 13:48:33] 2026-01-27 12:46:10,772 [wrapper] apfmon messages muted
[2026-01-27 13:48:33] 2026-01-27 12:46:10,776 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:48:33] 2026-01-27 12:46:10,780 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:48:33]  *** Error codes and diagnostics ***
[2026-01-27 13:48:33]     "exeErrorCode": 0,
[2026-01-27 13:48:33]     "exeErrorDiag": "",
[2026-01-27 13:48:33]     "pilotErrorCode": 0,
[2026-01-27 13:48:33]     "pilotErrorDiag": "",
[2026-01-27 13:48:33]  *** Listing of results directory ***
[2026-01-27 13:48:33] total 673340
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:48 queuedata.json
[2026-01-27 13:48:33] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc       100 Jan 27 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:48:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 10:46 run_atlas
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc       105 Jan 27 10:46 job.xml
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc      6692 Jan 27 10:46 init_data.xml
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc 494478603 Jan 27 10:46 EVNT.48318032._000014.pool.root.1
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc     15845 Jan 27 10:46 start_atlas.sh
[2026-01-27 13:48:33] drwxrwx--x 2 boinc boinc      4096 Jan 27 10:46 shared
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc    597760 Jan 27 10:46 input.tar.gz
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc         0 Jan 27 10:46 boinc_lockfile
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc      2530 Jan 27 10:46 pandaJob.out
[2026-01-27 13:48:33] -rw------- 1 boinc boinc   1002845 Jan 27 10:46 agis_schedconf.cvmfs.json
[2026-01-27 13:48:33] -rw------- 1 boinc boinc   1516246 Jan 27 10:46 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:48:33] -rw------- 1 boinc boinc       443 Jan 27 10:46 workernode_map.json
[2026-01-27 13:48:33] drwx------ 5 boinc boinc      4096 Jan 27 10:46 pilot3
[2026-01-27 13:48:33] -rw------- 1 boinc boinc 187410624 Jan 27 13:44 HITS.48318034._000665.pool.root.1
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc       528 Jan 27 13:44 boinc_task_state.xml
[2026-01-27 13:48:33] -rw------- 1 boinc boinc      1040 Jan 27 13:45 memory_monitor_summary.json
[2026-01-27 13:48:33] -rw------- 1 boinc boinc    350446 Jan 27 13:45 log.48318034._000665.job.log.tgz.1
[2026-01-27 13:48:33] -rw------- 1 boinc boinc      6347 Jan 27 13:45 heartbeat.json
[2026-01-27 13:48:33] -rw------- 1 boinc boinc        95 Jan 27 13:45 pilot_heartbeat.json
[2026-01-27 13:48:33] -rw------- 1 boinc boinc      4904 Jan 27 13:46 pilotlog.txt
[2026-01-27 13:48:33] -rw------- 1 boinc boinc   1486214 Jan 27 13:46 log.48318034._000665.job.log.1
[2026-01-27 13:48:33] -rw------- 1 boinc boinc       357 Jan 27 13:46 output.list
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc       620 Jan 27 13:46 runtime_log
[2026-01-27 13:48:33] -rw------- 1 boinc boinc   1853440 Jan 27 13:46 result.tar.gz
[2026-01-27 13:48:33] -rw------- 1 boinc boinc       665 Jan 27 13:46 t2QKDmlLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZT1KDmJFBowm.diag
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc      9222 Jan 27 13:46 runtime_log.err
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc        26 Jan 27 13:48 wrapper_checkpoint.txt
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc      8192 Jan 27 13:48 boinc_mmap_file
[2026-01-27 13:48:33] -rw-r--r-- 1 boinc boinc     21221 Jan 27 13:48 stderr.txt
[2026-01-27 13:48:33] HITS file was successfully produced:
[2026-01-27 13:48:33] -rw------- 1 boinc boinc 187410624 Jan 27 13:44 shared/HITS.pool.root.1
[2026-01-27 13:48:33]  *** Contents of shared directory: ***
[2026-01-27 13:48:33] total 668332
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc 494478603 Jan 27 10:46 ATLAS.root_0
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc     15845 Jan 27 10:46 start_atlas.sh
[2026-01-27 13:48:33] -rw-r--r-- 2 boinc boinc    597760 Jan 27 10:46 input.tar.gz
[2026-01-27 13:48:33] -rw------- 1 boinc boinc 187410624 Jan 27 13:44 HITS.pool.root.1
[2026-01-27 13:48:33] -rw------- 1 boinc boinc   1853440 Jan 27 13:46 result.tar.gz
13:48:34 (3958762): run_atlas exited; CPU time 42043.108979
13:48:34 (3958762): called boinc_finish(0)

</stderr_txt>
]]>

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