Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 12:12:00 (10120): vboxwrapper version 26210
2026-01-26 12:12:00 (10120): BOINC client version: 8.2.8
2026-01-26 12:12:00 (10120): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-01-26 12:12:01 (10120): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 12:12:01 (10120): Create VM. (boinc_9b98a7261a76321d, slot#2)
2026-01-26 12:12:01 (10120): Setting Memory Size for VM. (4800MB)
2026-01-26 12:12:02 (10120): Setting CPU Count for VM. (8)
2026-01-26 12:12:02 (10120): Setting Chipset Options for VM.
2026-01-26 12:12:02 (10120): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 12:12:03 (10120): Setting Boot Options for VM.
2026-01-26 12:12:03 (10120): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 12:12:03 (10120): Enabling VM Network Access.
2026-01-26 12:12:04 (10120): Disabling USB Support for VM.
2026-01-26 12:12:04 (10120): Disabling COM Port Support for VM.
2026-01-26 12:12:04 (10120): Disabling LPT Port Support for VM.
2026-01-26 12:12:04 (10120): Disabling Audio Support for VM.
2026-01-26 12:12:05 (10120): Disabling Clipboard Support for VM.
2026-01-26 12:12:05 (10120): Disabling Drag and Drop Support for VM.
2026-01-26 12:12:05 (10120): Adding storage controller(s) to VM.
2026-01-26 12:12:05 (10120): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 12:12:06 (10120): Adding VirtualBox Guest Additions to VM.
2026-01-26 12:12:06 (10120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 12:12:06 (10120): forwarding host port 61075 to guest port 80
2026-01-26 12:12:07 (10120): Enabling remote desktop for VM.
2026-01-26 12:12:07 (10120): Enabling shared directory for VM.
2026-01-26 12:12:08 (10120): Starting VM using VBoxManage interface. (boinc_9b98a7261a76321d, slot#2)
2026-01-26 12:12:14 (10120): Successfully started VM. (PID = '26760')
2026-01-26 12:12:14 (10120): Reporting VM Process ID to BOINC.
2026-01-26 12:12:14 (10120): Guest Log: BIOS: VirtualBox 7.1.4
2026-01-26 12:12:14 (10120): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 12:12:14 (10120): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 12:12:14 (10120): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 12:12:14 (10120): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 12:12:14 (10120): Detected: Web Application Enabled (http://localhost:61075)
2026-01-26 12:12:14 (10120): Detected: Remote Desktop Enabled (localhost:61076)
2026-01-26 12:12:14 (10120): Preference change detected
2026-01-26 12:12:14 (10120): Setting CPU throttle for VM. (100%)
2026-01-26 12:12:14 (10120): Setting network throttle for VM. (1024KB)
2026-01-26 12:12:14 (10120): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 12:12:16 (10120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 12:12:16 (10120): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 12:12:19 (10120): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 12:12:19 (10120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 12:12:19 (10120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 12:12:24 (10120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 12:12:24 (10120): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 12:12:30 (10120): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000249 main     Log opened 2026-01-26T12:12:28.195155000Z
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000362 main     OS Product: Linux
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000391 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000415 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000438 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000438 main     Process ID: 1378
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.000439 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 12:12:30 (10120): Guest Log: 00:00:00.001610 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 12:12:30 (10120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 12:12:30 (10120): Guest Log: [INFO] Mounting shared directory
2026-01-26 12:12:30 (10120): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 12:12:40 (10120): Guest Log: 00:00:10.011176 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 525 120 000ns (GuestNow=1 769 447 559 723 078 000 ns GuestLast=1 769 429 548 197 958 000 ns fSetTimeLastLoop=true )
2026-01-26 12:12:50 (10120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 12:12:50 (10120): Guest Log: [INFO] Detected branch: prod
2026-01-26 12:12:50 (10120): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 12:12:50 (10120): Guest Log: Copying input files
2026-01-26 12:12:53 (10120): Guest Log: Copied input files into RunAtlas.
2026-01-26 12:12:53 (10120): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2026-01-26 12:13:01 (10120): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 12:13:01 (10120): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 12:13:01 (10120): Guest Log: 2.6.3.0 1664 0 31632 155555 4 1 3117737 4096000 0 65024 0 0 n/a 1 1 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2026-01-26 12:13:01 (10120): Guest Log: copied the webapp to /var/www
2026-01-26 12:13:01 (10120): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-26 12:13:01 (10120): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-26 12:13:01 (10120): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 12:13:01 (10120): Guest Log:  *** Starting ATLAS job. (PandaID=6983327221 taskID=48318034) ***
2026-01-26 13:29:04 (10120): Guest Log:  *** Job finished ***
2026-01-26 13:29:04 (10120): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:42,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:52,507 [wrapper] supervise_pilot (15 min periods counter: 6)
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:55,796 | INFO     | [monitor] cgroup control has ended
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:56,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816104322880)>', '<ExcThread(monitor, started 139815496423168)>']
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:56,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:28:56,997 | INFO     | [monitor] control thread has ended
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,141 | INFO     | all workflow threads have been joined
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,141 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,141 | INFO     | traces error code: 0
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,207 [wrapper] ==== pilot stdout END ====
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,212 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,216 [wrapper] pilotpid: 6118
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,220 [wrapper] Pilot exit status: 0
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,321 [wrapper] pandaids: 6983327221
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,346 [wrapper] cleanup supervisor_pilot 25696 6119
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,351 [wrapper] Test setup, not cleaning
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,355 [wrapper] apfmon messages muted
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,359 [wrapper] ==== wrapper stdout END ====
2026-01-26 13:29:04 (10120): Guest Log: 2026-01-26 18:29:01,363 [wrapper] ==== wrapper stderr END ====
2026-01-26 13:29:04 (10120): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 13:29:04 (10120): Guest Log:     "exeErrorCode": 0,
2026-01-26 13:29:04 (10120): Guest Log:     "exeErrorDiag": "",
2026-01-26 13:29:04 (10120): Guest Log:     "pilotErrorCode": 0,
2026-01-26 13:29:04 (10120): Guest Log:     "pilotErrorDiag": "",
2026-01-26 13:29:04 (10120): Guest Log:  *** Listing of results directory ***
2026-01-26 13:29:04 (10120): Guest Log: total 184412
2026-01-26 13:29:04 (10120): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 18:47 pilot3.tar.gz
2026-01-26 13:29:04 (10120): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 18:48 queuedata.json
2026-01-26 13:29:04 (10120): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 18:49 runpilot2-wrapper.sh
2026-01-26 13:29:04 (10120): Guest Log: -rwxr-xr-x. 1 atlas atlas      9297 Jan 26 17:12 init_data.xml
2026-01-26 13:29:04 (10120): Guest Log: -rwxr-xr-x. 1 atlas atlas    597764 Jan 26 17:12 input.tar.gz
2026-01-26 13:29:04 (10120): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 17:12 start_atlas.sh
2026-01-26 13:29:04 (10120): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 17:12 EVNT.48318032._000017.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 13:29:04 (10120): Guest Log: -rw-r--r--. 1 atlas atlas      2531 Jan 26 17:13 pandaJob.out
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas        48 Jan 26 17:13 setup.sh.local
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas   1006384 Jan 26 17:14 agis_schedconf.cvmfs.json
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 17:14 agis_ddmendpoints.agis.ALL.json
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas       425 Jan 26 17:14 workernode_map.json
2026-01-26 13:29:04 (10120): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 17:14 pilot3
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas 182975750 Jan 26 18:27 HITS.48318034._000846.pool.root.1
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas      1038 Jan 26 18:28 memory_monitor_summary.json
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas        95 Jan 26 18:28 pilot_heartbeat.json
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas    357574 Jan 26 18:28 log.48318034._000846.job.log.tgz.1
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas      6335 Jan 26 18:28 heartbeat.json
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas      4873 Jan 26 18:29 pilotlog.txt
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas    634222 Jan 26 18:29 log.48318034._000846.job.log.1
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 18:29 output.list
2026-01-26 13:29:04 (10120): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 18:29 runtime_log
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas   1013760 Jan 26 18:29 result.tar.gz
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas       655 Jan 26 18:29 xGONDmvLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKU1KDmNFgKPo.diag
2026-01-26 13:29:04 (10120): Guest Log: -rw-r--r--. 1 atlas atlas      9220 Jan 26 18:29 runtime_log.err
2026-01-26 13:29:04 (10120): Guest Log: Looking for outputfile HITS.48318034._000846.pool.root.1
2026-01-26 13:29:04 (10120): Guest Log: HITS file was successfully produced
2026-01-26 13:29:04 (10120): Guest Log: -rw-------. 1 atlas atlas 182975750 Jan 26 18:27 /home/atlas/RunAtlas/HITS.48318034._000846.pool.root.1
2026-01-26 13:29:05 (10120): Guest Log: Successfully finished the ATLAS job!
2026-01-26 13:29:05 (10120): Guest Log: Copying the results back to the shared directory!
2026-01-26 13:29:05 (10120): Guest Log:  *** Contents of shared directory: ***
2026-01-26 13:29:05 (10120): Guest Log: total 661324
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root 492573026 Jan 26 17:12 ATLAS.root_0
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root 182975750 Jan 26  2026 HITS.pool.root.1
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root      9297 Jan 26 17:12 init_data.xml
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root    597764 Jan 26 02:41 input.tar.gz
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root   1013760 Jan 26  2026 result.tar.gz
2026-01-26 13:29:05 (10120): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 02:41 start_atlas.sh
2026-01-26 13:29:05 (10120): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 13:29:05 (10120): VM Completion File Detected.
2026-01-26 13:29:05 (10120): Powering off VM.
2026-01-26 13:29:06 (10120): Successfully stopped VM.
2026-01-26 13:29:06 (10120): Deregistering VM. (boinc_9b98a7261a76321d, slot#2)
2026-01-26 13:29:06 (10120): Removing network bandwidth throttle group from VM.
2026-01-26 13:29:06 (10120): Removing VM from VirtualBox.
2026-01-26 13:29:11 (10120): called boinc_finish(0)

</stderr_txt>
]]>

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