Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:25:03 (260834): wrapper (7.7.26015): starting
17:25:03 (260834): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 17:25:03] Arguments: --nthreads 12
[2026-01-27 17:25:03] Threads: 12
[2026-01-27 17:25:03] Checking for CVMFS
[2026-01-27 17:25:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 17:25:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 17:25:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 17:25:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 17:25:12] 2.13.3.0 2888 2601 56512 155594 0 49 3536803 4096000 912 130560 0 765101 99.970 106538 1202 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 17:25:12] CVMFS is ok
[2026-01-27 17:25:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 17:25:12] Checking for apptainer binary...
[2026-01-27 17:25:12] apptainer is not installed, using version from CVMFS
[2026-01-27 17:25:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 17:25:13] g6400
[2026-01-27 17:25:13] apptainer works
[2026-01-27 17:25:13] Set ATHENA_PROC_NUMBER=12
[2026-01-27 17:25:13] Set ATHENA_CORE_NUMBER=12
[2026-01-27 17:25:13] Starting ATLAS job with PandaID=6983326915
[2026-01-27 17:25:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 22:36:41]  *** The last 200 lines of the pilot log: ***
[2026-01-27 22:36:41] 2026-01-27 22:35:55,954 | INFO     | this job has now completed (state=finished)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,954 | INFO     | log transfer has been attempted: DONE
[2026-01-27 22:36:41] 2026-01-27 22:35:55,954 | INFO     | job 6983326915 has finished - writing final server update
[2026-01-27 22:36:41] 2026-01-27 22:35:55,954 | INFO     | total number of processed events: 400 (read)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,972 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983326915/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,973 | INFO     | extracted standard info from prmon json
[2026-01-27 22:36:41] 2026-01-27 22:35:55,973 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 22:36:41] 2026-01-27 22:35:55,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 22:36:41] 2026-01-27 22:35:55,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 22:36:41] 2026-01-27 22:35:55,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 22:36:41] 2026-01-27 22:35:55,979 | INFO     | fitting pss+swap vs Time
[2026-01-27 22:36:41] 2026-01-27 22:35:55,979 | INFO     | sum of square deviations: 8626633232.93729
[2026-01-27 22:36:41] 2026-01-27 22:35:55,989 | INFO     | sum of deviations: -548015049.7293625
[2026-01-27 22:36:41] 2026-01-27 22:35:55,989 | INFO     | mean x: 1769544114.2508252
[2026-01-27 22:36:41] 2026-01-27 22:35:55,989 | INFO     | mean y: 2682844.9174917494
[2026-01-27 22:36:41] 2026-01-27 22:35:55,989 | INFO     | intersect: 115094811.39207433
[2026-01-27 22:36:41] 2026-01-27 22:35:55,989 | INFO     | chi2: 3.9444067217894316
[2026-01-27 22:36:41] 2026-01-27 22:35:55,990 | INFO     | sum of square deviations: 8206639235.117476
[2026-01-27 22:36:41] 2026-01-27 22:35:55,991 | INFO     | sum of deviations: 20134967919.47651
[2026-01-27 22:36:41] 2026-01-27 22:35:55,991 | INFO     | mean x: 1769543961.7550335
[2026-01-27 22:36:41] 2026-01-27 22:35:55,991 | INFO     | mean y: 2690254.348993289
[2026-01-27 22:36:41] 2026-01-27 22:35:55,991 | INFO     | intersect: -4338881232.012431
[2026-01-27 22:36:41] 2026-01-27 22:35:55,992 | INFO     | chi2: 3.255975497420421
[2026-01-27 22:36:41] 2026-01-27 22:35:55,992 | INFO     | current chi2=3.255975497420421 (change=17.453352884884413 %)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,992 | INFO     | right removable region: 297
[2026-01-27 22:36:41] 2026-01-27 22:35:55,992 | INFO     | sum of square deviations: 8206592875.117476
[2026-01-27 22:36:41] 2026-01-27 22:35:55,993 | INFO     | sum of deviations: -83214371137.5201
[2026-01-27 22:36:41] 2026-01-27 22:35:55,993 | INFO     | mean x: 1769544266.7550335
[2026-01-27 22:36:41] 2026-01-27 22:35:55,993 | INFO     | mean y: 2712764.513422819
[2026-01-27 22:36:41] 2026-01-27 22:35:55,993 | INFO     | intersect: 17945787996.68355
[2026-01-27 22:36:41] 2026-01-27 22:35:55,994 | INFO     | chi2: 1.3026331523627905
[2026-01-27 22:36:41] 2026-01-27 22:35:55,994 | INFO     | current chi2=1.3026331523627905 (change=66.97518171321252 %)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,994 | INFO     | sum of square deviations: 7800413242.286658
[2026-01-27 22:36:41] 2026-01-27 22:35:55,995 | INFO     | sum of deviations: -101442371855.39246
[2026-01-27 22:36:41] 2026-01-27 22:35:55,995 | INFO     | mean x: 1769544419.2593856
[2026-01-27 22:36:41] 2026-01-27 22:35:55,995 | INFO     | mean y: 2719585.5972696245
[2026-01-27 22:36:41] 2026-01-27 22:35:55,996 | INFO     | intersect: 23015190517.268505
[2026-01-27 22:36:41] 2026-01-27 22:35:55,996 | INFO     | chi2: 1.1282119714343355
[2026-01-27 22:36:41] 2026-01-27 22:35:55,996 | INFO     | current chi2=1.1282119714343355 (change=13.389892665642659 %)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,996 | INFO     | left removable region: 20
[2026-01-27 22:36:41] 2026-01-27 22:35:55,996 | INFO     | sum of square deviations: 6591129233.148003
[2026-01-27 22:36:41] 2026-01-27 22:35:55,997 | INFO     | sum of deviations: -64738502174.895294
[2026-01-27 22:36:41] 2026-01-27 22:35:55,997 | INFO     | mean x: 1769544541.2743683
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | mean y: 2721809.1696750904
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | intersect: 17383303964.611748
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | chi2: 0.36122934101875676
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | current memory leak: -9.82 B/s (using 277 data points, chi2=0.36)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | could have reported an average CPU frequency of 3999 MHz (14 samples)
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | ..............................
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | . Timing measurements:
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | . get job = 0 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,998 | INFO     | . initial setup = 39 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | . payload setup = 48 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | . stage-in = 0 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | . payload execution = 18474 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | . stage-out = 2 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | . log creation = 0 s
[2026-01-27 22:36:41] 2026-01-27 22:35:55,999 | INFO     | ..............................
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | 
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | job summary report
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | --------------------------------------------------
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | PanDA job id: 6983326915
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | task id: 48318034
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | errors: (none)
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | pilot state: finished 
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | transexitcode: 0
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | exeerrorcode: 0
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | exeerrordiag: 
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | exitcode: 0
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | exitmsg: OK
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | cpuconsumptiontime: 31918 s
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | nevents: 400
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | neventsw: 0
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | pid: 269241
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | pgrp: 269241
[2026-01-27 22:36:41] 2026-01-27 22:35:56,094 | INFO     | corecount: 12
[2026-01-27 22:36:41] 2026-01-27 22:35:56,095 | INFO     | event service: False
[2026-01-27 22:36:41] 2026-01-27 22:35:56,095 | INFO     | sizes: {0: 2283729, 1: 2274387, 2: 2284274, 18527: 2316755, 18530: 2325855, 18531: 2325993}
[2026-01-27 22:36:41] 2026-01-27 22:35:56,095 | INFO     | --------------------------------------------------
[2026-01-27 22:36:41] 2026-01-27 22:35:56,095 | INFO     | 
[2026-01-27 22:36:41] 2026-01-27 22:35:56,095 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | job 6983326915 has completed (purged errors)
[2026-01-27 22:36:41] 2026-01-27 22:35:56,157 | INFO     | overall cleanup function is called
[2026-01-27 22:36:41] 2026-01-27 22:35:57,164 | INFO     | --- collectZombieJob: --- 10, [269241]
[2026-01-27 22:36:41] 2026-01-27 22:35:57,164 | INFO     | zombie collector waiting for pid 269241
[2026-01-27 22:36:41] 2026-01-27 22:35:57,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 22:36:41] 2026-01-27 22:35:57,164 | INFO     | collected zombie processes
[2026-01-27 22:36:41] 2026-01-27 22:35:57,164 | INFO     | will attempt to kill all subprocesses of pid=269241
[2026-01-27 22:36:41] 2026-01-27 22:35:57,224 | INFO     | process IDs to be killed: [269241] (in reverse order)
[2026-01-27 22:36:41] 2026-01-27 22:35:57,901 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 22:36:41] 2026-01-27 22:35:57,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 22:36:41] 2026-01-27 22:35:57,902 | INFO     | did not find any defunct processes belonging to 269241
[2026-01-27 22:36:41] 2026-01-27 22:35:57,903 | INFO     | did not find any defunct processes belonging to 269241
[2026-01-27 22:36:41] 2026-01-27 22:35:57,903 | INFO     | ready for new job
[2026-01-27 22:36:41] 2026-01-27 22:35:57,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 22:36:41] 2026-01-27 22:35:57,916 | INFO     | **************************************
[2026-01-27 22:36:41] 2026-01-27 22:35:57,917 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 22:36:41] 2026-01-27 22:35:57,917 | INFO     | **************************************
[2026-01-27 22:36:41] 2026-01-27 22:35:57,917 | INFO     | 
[2026-01-27 22:36:41] 2026-01-27 22:35:57,936 | INFO     | architecture information:
[2026-01-27 22:36:41] 2026-01-27 22:35:57,940 | INFO     | executing command: cat /etc/os-release
[2026-01-27 22:36:41] 2026-01-27 22:35:57,996 | INFO     | cat /etc/os-release:
[2026-01-27 22:36:41] NAME="CentOS Linux"
[2026-01-27 22:36:41] VERSION="7 (Core)"
[2026-01-27 22:36:41] ID="centos"
[2026-01-27 22:36:41] ID_LIKE="rhel fedora"
[2026-01-27 22:36:41] VERSION_ID="7"
[2026-01-27 22:36:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 22:36:41] ANSI_COLOR="0;31"
[2026-01-27 22:36:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 22:36:41] HOME_URL="https://www.centos.org/"
[2026-01-27 22:36:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 22:36:41] 
[2026-01-27 22:36:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 22:36:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 22:36:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 22:36:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 22:36:41] 
[2026-01-27 22:36:41] 2026-01-27 22:35:57,996 | INFO     | **************************************
[2026-01-27 22:36:41] 2026-01-27 22:35:58,215 | WARNING  | process 269241 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 22:36:41] 2026-01-27 22:35:58,264 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 22:36:41] 2026-01-27 22:35:58,299 | INFO     | number of running child processes to parent process 269241: 1
[2026-01-27 22:36:41] 2026-01-27 22:35:58,299 | INFO     | maximum number of monitored processes: 6
[2026-01-27 22:36:41] 2026-01-27 22:35:58,299 | INFO     | aborting job monitoring since job object (job id=6983326915) has expired
[2026-01-27 22:36:41] 2026-01-27 22:35:58,500 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-27 22:36:41] 2026-01-27 22:35:58,556 | INFO     | sufficient remaining disk space (191300108288 B)
[2026-01-27 22:36:41] 2026-01-27 22:35:58,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 22:36:41] 2026-01-27 22:35:58,556 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 22:36:41] 2026-01-27 22:35:58,556 | INFO     | update_server=False
[2026-01-27 22:36:41] 2026-01-27 22:35:58,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 22:36:41] 2026-01-27 22:35:58,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 22:36:41] 2026-01-27 22:35:58,557 | INFO     | will abort loop
[2026-01-27 22:36:41] 2026-01-27 22:35:58,604 | INFO     | all payload control threads have been joined
[2026-01-27 22:36:41] 2026-01-27 22:35:58,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 22:36:41] 2026-01-27 22:35:59,184 | INFO     | all data control threads have been joined
[2026-01-27 22:36:41] 2026-01-27 22:35:59,500 | INFO     | all job control threads have been joined
[2026-01-27 22:36:41] 2026-01-27 22:35:59,560 | INFO     | [job] retrieve thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:35:59,560 | INFO     | [job] job monitor thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:35:59,608 | INFO     | [payload] control thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:35:59,952 | INFO     | [data] copytool_in thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:35:59,956 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,136 | INFO     | [job] validate thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,192 | INFO     | [data] control thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,416 | INFO     | [payload] validate_post thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,504 | INFO     | [job] control thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,640 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,784 | INFO     | [data] copytool_out thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:00,900 | INFO     | [payload] failed_post thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:01,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 22:36:41] 2026-01-27 22:36:01,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 22:36:41] 2026-01-27 22:36:02,124 | INFO     | [job] queue monitor thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:05,876 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:09,184 | INFO     | job.realtimelogging is not enabled
[2026-01-27 22:36:41] 2026-01-27 22:36:10,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 22:36:41] 2026-01-27 22:36:29,105 | INFO     | PID=264839 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 22:36:41] 2026-01-27 22:36:29,105 | INFO     | .. there are 2 such processes running
[2026-01-27 22:36:41] 2026-01-27 22:36:29,105 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 22:36:41] 2026-01-27 22:36:29,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 22:36:41] 2026-01-27 22:36:29,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 22:36:41] 2026-01-27 22:36:33,232 | INFO     | [monitor] cgroup control has ended
[2026-01-27 22:36:41] 2026-01-27 22:36:34,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418725664576)>', '<ExcThread(monitor, started 140418285025024)>']
[2026-01-27 22:36:41] 2026-01-27 22:36:35,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 22:36:41] 2026-01-27 22:36:35,152 | INFO     | [monitor] control thread has ended
[2026-01-27 22:36:41] 2026-01-27 22:36:39,864 | INFO     | all workflow threads have been joined
[2026-01-27 22:36:41] 2026-01-27 22:36:39,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 22:36:41] 2026-01-27 22:36:39,864 | INFO     | traces error code: 0
[2026-01-27 22:36:41] 2026-01-27 22:36:39,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 22:36:41] 2026-01-27 22:36:40,205 [wrapper] ==== pilot stdout END ====
[2026-01-27 22:36:41] 2026-01-27 22:36:40,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 22:36:41] 2026-01-27 22:36:40,281 [wrapper] pilotpid: 264839
[2026-01-27 22:36:41] 2026-01-27 22:36:40,324 [wrapper] Pilot exit status: 0
[2026-01-27 22:36:41] 2026-01-27 22:36:40,480 [wrapper] pandaids: 6983326915
[2026-01-27 22:36:41] 2026-01-27 22:36:40,568 [wrapper] cleanup supervisor_pilot  290954 264840
[2026-01-27 22:36:41] 2026-01-27 22:36:40,589 [wrapper] Test setup, not cleaning
[2026-01-27 22:36:41] 2026-01-27 22:36:40,620 [wrapper] apfmon messages muted
[2026-01-27 22:36:41] 2026-01-27 22:36:40,660 [wrapper] ==== wrapper stdout END ====
[2026-01-27 22:36:41] 2026-01-27 22:36:40,704 [wrapper] ==== wrapper stderr END ====
[2026-01-27 22:36:41]  *** Error codes and diagnostics ***
[2026-01-27 22:36:41]     "exeErrorCode": 0,
[2026-01-27 22:36:41]     "exeErrorDiag": "",
[2026-01-27 22:36:41]     "pilotErrorCode": 0,
[2026-01-27 22:36:41]     "pilotErrorDiag": "",
[2026-01-27 22:36:41]  *** Listing of results directory ***
[2026-01-27 22:36:41] total 681172
[2026-01-27 22:36:41] -rw-r--r-- 1 boinc boinc    584422 Jan 25 18:47 pilot3.tar.gz
[2026-01-27 22:36:41] -rw-r--r-- 1 boinc boinc      5111 Jan 25 18:48 queuedata.json
[2026-01-27 22:36:41] -rwx------ 1 boinc boinc     36322 Jan 25 18:49 runpilot2-wrapper.sh
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc       100 Jan 27 17:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 22:36:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 17:24 run_atlas
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc       105 Jan 27 17:24 job.xml
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc 500661054 Jan 27 17:25 EVNT.48318032._000015.pool.root.1
[2026-01-27 22:36:41] drwxrwx--x 2 boinc boinc      4096 Jan 27 17:25 shared
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc    597763 Jan 27 17:25 input.tar.gz
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc     15845 Jan 27 17:25 start_atlas.sh
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc      9475 Jan 27 17:25 init_data.xml
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc         0 Jan 27 17:25 boinc_setup_complete
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc         0 Jan 27 17:25 boinc_lockfile
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc      2530 Jan 27 17:25 pandaJob.out
[2026-01-27 22:36:41] -rw------- 1 boinc boinc   1005228 Jan 27 17:26 agis_schedconf.cvmfs.json
[2026-01-27 22:36:41] -rw------- 1 boinc boinc       417 Jan 27 17:26 workernode_map.json
[2026-01-27 22:36:41] drwx------ 5 boinc boinc      4096 Jan 27 17:27 pilot3
[2026-01-27 22:36:41] -rw------- 1 boinc boinc 186373918 Jan 27 22:35 HITS.48318034._000720.pool.root.1
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc       531 Jan 27 22:35 boinc_task_state.xml
[2026-01-27 22:36:41] -rw------- 1 boinc boinc        95 Jan 27 22:35 pilot_heartbeat.json
[2026-01-27 22:36:41] -rw------- 1 boinc boinc      1023 Jan 27 22:35 memory_monitor_summary.json
[2026-01-27 22:36:41] -rw------- 1 boinc boinc   1516246 Jan 27 22:35 agis_ddmendpoints.agis.ALL.json
[2026-01-27 22:36:41] -rw------- 1 boinc boinc    588935 Jan 27 22:35 log.48318034._000720.job.log.tgz.1
[2026-01-27 22:36:41] -rw------- 1 boinc boinc      6309 Jan 27 22:35 heartbeat.json
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 22:36 boinc_mmap_file
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc        28 Jan 27 22:36 wrapper_checkpoint.txt
[2026-01-27 22:36:41] -rw------- 1 boinc boinc      5456 Jan 27 22:36 pilotlog.txt
[2026-01-27 22:36:41] -rw------- 1 boinc boinc   2681619 Jan 27 22:36 log.48318034._000720.job.log.1
[2026-01-27 22:36:41] -rw------- 1 boinc boinc       357 Jan 27 22:36 output.list
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc       620 Jan 27 22:36 runtime_log
[2026-01-27 22:36:41] -rw------- 1 boinc boinc   3287040 Jan 27 22:36 result.tar.gz
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc      9160 Jan 27 22:36 runtime_log.err
[2026-01-27 22:36:41] -rw------- 1 boinc boinc       653 Jan 27 22:36 PQANDmtLK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmX57KDmZnjJjm.diag
[2026-01-27 22:36:41] -rw-rw-r-- 1 boinc boinc     21089 Jan 27 22:36 stderr.txt
[2026-01-27 22:36:41] HITS file was successfully produced:
[2026-01-27 22:36:41] -rw------- 1 boinc boinc 186373918 Jan 27 22:35 shared/HITS.pool.root.1
[2026-01-27 22:36:41]  *** Contents of shared directory: ***
[2026-01-27 22:36:41] total 674756
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc 500661054 Jan 27 17:25 ATLAS.root_0
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc    597763 Jan 27 17:25 input.tar.gz
[2026-01-27 22:36:41] -rw-r--r-- 2 boinc boinc     15845 Jan 27 17:25 start_atlas.sh
[2026-01-27 22:36:41] -rw------- 1 boinc boinc 186373918 Jan 27 22:35 HITS.pool.root.1
[2026-01-27 22:36:41] -rw------- 1 boinc boinc   3287040 Jan 27 22:36 result.tar.gz
22:36:42 (260834): run_atlas exited; CPU time 31989.986351
22:36:42 (260834): called boinc_finish(0)

</stderr_txt>
]]>

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