Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:35:17 (875649): wrapper (7.7.26015): starting
18:35:17 (875649): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:35:17] Arguments: --nthreads 12
[2026-01-26 18:35:17] Threads: 12
[2026-01-26 18:35:17] Checking for CVMFS
[2026-01-26 18:35:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:35:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:35:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:35:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:35:22] 2.13.1.0 2787 1620 64172 155556 2 50 2113082 4096001 1824 130560 0 2577614 99.993 64892 818 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 18:35:22] CVMFS is ok
[2026-01-26 18:35:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:35:22] Checking for apptainer binary...
[2026-01-26 18:35:22] apptainer is not installed, using version from CVMFS
[2026-01-26 18:35:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:35:23] ryzen7
[2026-01-26 18:35:23] apptainer works
[2026-01-26 18:35:23] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:35:23] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:35:24] Starting ATLAS job with PandaID=6983015693
[2026-01-26 18:35:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:52:56]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:52:56]  mtime=0
[2026-01-26 19:52:56]  protocol_id=None
[2026-01-26 19:52:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:52:56]  replicas=None
[2026-01-26 19:52:56]  scope=mc23_13p6TeV
[2026-01-26 19:52:56]  status=None
[2026-01-26 19:52:56]  status_code=0
[2026-01-26 19:52:56]  storage_token=
[2026-01-26 19:52:56]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983015693/log.48317931._001044.job.log.tgz.1
[2026-01-26 19:52:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/3b/log.48317931._001044.job.log.tgz.1
[2026-01-26 19:52:56]  workdir=None
[2026-01-26 19:52:56] ]
[2026-01-26 19:52:56] 2026-01-26 19:51:55,353 | INFO     | transferring file log.48317931._001044.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983015693/log.48317931._001044.job.log.tgz.1 t
[2026-01-26 19:52:56] 2026-01-26 19:51:55,353 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983015693/log.48317931._001044.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 19:52:56] 2026-01-26 19:51:55,530 | INFO     | adding to output.list: log.48317931._001044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/3b/log.48317931._001044.job.log.tg
[2026-01-26 19:52:56] 2026-01-26 19:51:55,530 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:52:56] 2026-01-26 19:51:55,530 | INFO     | summary of transferred files:
[2026-01-26 19:52:56] 2026-01-26 19:51:55,530 | INFO     |  -- lfn=log.48317931._001044.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:52:56] 2026-01-26 19:51:55,531 | INFO     | stage-out finished correctly
[2026-01-26 19:52:56] 2026-01-26 19:51:55,702 | INFO     | time since job start (4453s) is within the limit (349056.0s)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,594 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:52:56] 2026-01-26 19:51:57,710 | INFO     | job 6983015693 has state=finished
[2026-01-26 19:52:56] 2026-01-26 19:51:57,710 | INFO     | preparing for final server update for job 6983015693 in state='finished'
[2026-01-26 19:52:56] 2026-01-26 19:51:57,710 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983015693/jobReport.json
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/0/workernode_map.json
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | job 6983015693 has finished - writing final server update
[2026-01-26 19:52:56] 2026-01-26 19:51:57,712 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,714 | INFO     | time since job start (4455s) is within the limit (349056.0s)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,732 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6983015693/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,732 | INFO     | extracted standard info from prmon json
[2026-01-26 19:52:56] 2026-01-26 19:51:57,732 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:52:56] 2026-01-26 19:51:57,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:52:56] 2026-01-26 19:51:57,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:52:56] 2026-01-26 19:51:57,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | sum of square deviations: 85136480.0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | sum of deviations: -6972873582.999999
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | mean x: 1769455028.0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | mean y: 2749676.2615384613
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | intersect: 144925187402.69473
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | chi2: 0.04527315160148554
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | current memory leak: -81.90 B/s (using 65 data points, chi2=0.05)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,739 | INFO     | could have reported an average CPU frequency of 4313 MHz (6 samples)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | ..............................
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . Timing measurements:
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . get job = 0 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . initial setup = 48 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . payload setup = 54 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . stage-in = 0 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . payload execution = 4381 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . stage-out = 1 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | . log creation = 0 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,740 | INFO     | ..............................
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | 
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | job summary report
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | --------------------------------------------------
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | PanDA job id: 6983015693
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | task id: 48317931
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | errors: (none)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | pilot state: finished 
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | transexitcode: 0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | exeerrorcode: 0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | exeerrordiag: 
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | exitcode: 0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | exitmsg: OK
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | cpuconsumptiontime: 24398 s
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | nevents: 400
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | neventsw: 0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | pid: 884419
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | pgrp: 884419
[2026-01-26 19:52:56] 2026-01-26 19:51:57,866 | INFO     | corecount: 12
[2026-01-26 19:52:56] 2026-01-26 19:51:57,867 | INFO     | event service: False
[2026-01-26 19:52:56] 2026-01-26 19:51:57,867 | INFO     | sizes: {0: 2283710, 1: 2284227, 12: 2284227, 4439: 2310306, 4441: 2319350, 4443: 2319728}
[2026-01-26 19:52:56] 2026-01-26 19:51:57,867 | INFO     | --------------------------------------------------
[2026-01-26 19:52:56] 2026-01-26 19:51:57,867 | INFO     | 
[2026-01-26 19:52:56] 2026-01-26 19:51:57,867 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | job 6983015693 has completed (purged errors)
[2026-01-26 19:52:56] 2026-01-26 19:51:57,951 | INFO     | overall cleanup function is called
[2026-01-26 19:52:56] 2026-01-26 19:51:58,834 | INFO     | PID=879840 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 19:52:56] 2026-01-26 19:51:58,834 | INFO     | .. there are 3 such processes running
[2026-01-26 19:52:56] 2026-01-26 19:51:58,958 | INFO     | --- collectZombieJob: --- 10, [884419]
[2026-01-26 19:52:56] 2026-01-26 19:51:58,958 | INFO     | zombie collector waiting for pid 884419
[2026-01-26 19:52:56] 2026-01-26 19:51:58,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:52:56] 2026-01-26 19:51:58,958 | INFO     | collected zombie processes
[2026-01-26 19:52:56] 2026-01-26 19:51:58,958 | INFO     | will attempt to kill all subprocesses of pid=884419
[2026-01-26 19:52:56] 2026-01-26 19:51:59,019 | INFO     | process IDs to be killed: [884419] (in reverse order)
[2026-01-26 19:52:56] 2026-01-26 19:51:59,054 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:52:56] 2026-01-26 19:51:59,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:52:56] 2026-01-26 19:51:59,056 | INFO     | did not find any defunct processes belonging to 884419
[2026-01-26 19:52:56] 2026-01-26 19:51:59,057 | INFO     | did not find any defunct processes belonging to 884419
[2026-01-26 19:52:56] 2026-01-26 19:51:59,057 | INFO     | ready for new job
[2026-01-26 19:52:56] 2026-01-26 19:51:59,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:52:56] 2026-01-26 19:51:59,058 | INFO     | **************************************
[2026-01-26 19:52:56] 2026-01-26 19:51:59,058 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:52:56] 2026-01-26 19:51:59,058 | INFO     | **************************************
[2026-01-26 19:52:56] 2026-01-26 19:51:59,058 | INFO     | 
[2026-01-26 19:52:56] 2026-01-26 19:51:59,082 | INFO     | architecture information:
[2026-01-26 19:52:56] 2026-01-26 19:51:59,082 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:52:56] 2026-01-26 19:51:59,166 | INFO     | cat /etc/os-release:
[2026-01-26 19:52:56] NAME="CentOS Linux"
[2026-01-26 19:52:56] VERSION="7 (Core)"
[2026-01-26 19:52:56] ID="centos"
[2026-01-26 19:52:56] ID_LIKE="rhel fedora"
[2026-01-26 19:52:56] VERSION_ID="7"
[2026-01-26 19:52:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:52:56] ANSI_COLOR="0;31"
[2026-01-26 19:52:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:52:56] HOME_URL="https://www.centos.org/"
[2026-01-26 19:52:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:52:56] 
[2026-01-26 19:52:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:52:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:52:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:52:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:52:56] 
[2026-01-26 19:52:56] 2026-01-26 19:51:59,166 | INFO     | **************************************
[2026-01-26 19:52:56] 2026-01-26 19:51:59,670 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | INFO     | sufficient remaining disk space (164251041792 B)
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | INFO     | update_server=False
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:52:56] 2026-01-26 19:51:59,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:52:56] 2026-01-26 19:51:59,754 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 19:52:56] 2026-01-26 19:51:59,754 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:52:56] 2026-01-26 19:51:59,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:52:56] 2026-01-26 19:51:59,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:52:56] 2026-01-26 19:52:00,108 | WARNING  | process 884419 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 19:52:56] 2026-01-26 19:52:00,200 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:52:56] 2026-01-26 19:52:00,201 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:52:56] 2026-01-26 19:52:00,201 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 19:52:56] 2026-01-26 19:52:00,201 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 19:52:56] 2026-01-26 19:52:00,297 | INFO     | number of running child processes to parent process 884419: 1
[2026-01-26 19:52:56] 2026-01-26 19:52:00,297 | INFO     | maximum number of monitored processes: 6
[2026-01-26 19:52:56] 2026-01-26 19:52:00,298 | INFO     | aborting job monitoring since job object (job id=6983015693) has expired
[2026-01-26 19:52:56] 2026-01-26 19:52:00,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:52:56] 2026-01-26 19:52:00,302 | INFO     | will abort loop
[2026-01-26 19:52:56] 2026-01-26 19:52:00,302 | INFO     | all payload control threads have been joined
[2026-01-26 19:52:56] 2026-01-26 19:52:00,414 | INFO     | all data control threads have been joined
[2026-01-26 19:52:56] 2026-01-26 19:52:00,706 | INFO     | all job control threads have been joined
[2026-01-26 19:52:56] 2026-01-26 19:52:00,754 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:00,754 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:52:56] 2026-01-26 19:52:01,230 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,290 | INFO     | [job] validate thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,310 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,310 | INFO     | [payload] control thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,390 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,418 | INFO     | [data] control thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,650 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,714 | INFO     | [job] control thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:01,894 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:02,210 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:02,266 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:03,202 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:03,770 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:52:56] 2026-01-26 19:52:49,610 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:52:56] 2026-01-26 19:52:49,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562913527616)>', '<ExcThread(monitor, started 140562627798784)>']
[2026-01-26 19:52:56] 2026-01-26 19:52:50,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:52:56] 2026-01-26 19:52:50,050 | INFO     | [monitor] control thread has ended
[2026-01-26 19:52:56] 2026-01-26 19:52:54,870 | INFO     | all workflow threads have been joined
[2026-01-26 19:52:56] 2026-01-26 19:52:54,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:52:56] 2026-01-26 19:52:54,870 | INFO     | traces error code: 0
[2026-01-26 19:52:56] 2026-01-26 19:52:54,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:52:56] 2026-01-26 19:52:55,027 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:52:56] 2026-01-26 19:52:55,082 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:52:56] 2026-01-26 19:52:55,095 [wrapper] pilotpid: 879840
[2026-01-26 19:52:56] 2026-01-26 19:52:55,111 [wrapper] Pilot exit status: 0
[2026-01-26 19:52:56] 2026-01-26 19:52:55,226 [wrapper] pandaids: 6983015693
[2026-01-26 19:52:56] 2026-01-26 19:52:55,382 [wrapper] cleanup supervisor_pilot  916824 879841
[2026-01-26 19:52:56] 2026-01-26 19:52:55,391 [wrapper] Test setup, not cleaning
[2026-01-26 19:52:56] 2026-01-26 19:52:55,450 [wrapper] apfmon messages muted
[2026-01-26 19:52:56] 2026-01-26 19:52:55,478 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:52:56] 2026-01-26 19:52:55,502 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:52:56]  *** Error codes and diagnostics ***
[2026-01-26 19:52:56]     "exeErrorCode": 0,
[2026-01-26 19:52:56]     "exeErrorDiag": "",
[2026-01-26 19:52:56]     "pilotErrorCode": 0,
[2026-01-26 19:52:56]     "pilotErrorDiag": "",
[2026-01-26 19:52:56]  *** Listing of results directory ***
[2026-01-26 19:52:56] total 674624
[2026-01-26 19:52:56] -rw-r--r-- 1 boinc boinc    584422 Jan 25 14:11 pilot3.tar.gz
[2026-01-26 19:52:56] -rw-r--r-- 1 boinc boinc      5111 Jan 25 14:11 queuedata.json
[2026-01-26 19:52:56] -rwx------ 1 boinc boinc     36322 Jan 25 14:12 runpilot2-wrapper.sh
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc       100 Jan 26 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:52:56] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 18:35 run_atlas
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc       105 Jan 26 18:35 job.xml
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc 500370369 Jan 26 18:35 EVNT.48317929._000021.pool.root.1
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:35 start_atlas.sh
[2026-01-26 19:52:56] drwxrwx--x 2 boinc boinc      4096 Jan 26 18:35 shared
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc    597758 Jan 26 18:35 input.tar.gz
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc      6934 Jan 26 18:35 init_data.xml
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:35 boinc_setup_complete
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc         0 Jan 26 18:35 boinc_lockfile
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc      2508 Jan 26 18:35 pandaJob.out
[2026-01-26 19:52:56] -rw------- 1 boinc boinc   1006384 Jan 26 18:36 agis_schedconf.cvmfs.json
[2026-01-26 19:52:56] -rw------- 1 boinc boinc   1516246 Jan 26 18:36 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:52:56] -rw------- 1 boinc boinc       414 Jan 26 18:37 workernode_map.json
[2026-01-26 19:52:56] drwx------ 5 boinc boinc      4096 Jan 26 18:37 pilot3
[2026-01-26 19:52:56] -rw------- 1 boinc boinc 184326234 Jan 26 19:51 HITS.48317931._001044.pool.root.1
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc       531 Jan 26 19:51 boinc_task_state.xml
[2026-01-26 19:52:56] -rw------- 1 boinc boinc      1023 Jan 26 19:51 memory_monitor_summary.json
[2026-01-26 19:52:56] -rw------- 1 boinc boinc        95 Jan 26 19:51 pilot_heartbeat.json
[2026-01-26 19:52:56] -rw------- 1 boinc boinc    406416 Jan 26 19:51 log.48317931._001044.job.log.tgz.1
[2026-01-26 19:52:56] -rw------- 1 boinc boinc      6284 Jan 26 19:51 heartbeat.json
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 19:52 boinc_mmap_file
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc        27 Jan 26 19:52 wrapper_checkpoint.txt
[2026-01-26 19:52:56] -rw------- 1 boinc boinc      5460 Jan 26 19:52 pilotlog.txt
[2026-01-26 19:52:56] -rw------- 1 boinc boinc    681156 Jan 26 19:52 log.48317931._001044.job.log.1
[2026-01-26 19:52:56] -rw------- 1 boinc boinc       357 Jan 26 19:52 output.list
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc       620 Jan 26 19:52 runtime_log
[2026-01-26 19:52:56] -rw------- 1 boinc boinc   1105920 Jan 26 19:52 result.tar.gz
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc      9156 Jan 26 19:52 runtime_log.err
[2026-01-26 19:52:56] -rw------- 1 boinc boinc       649 Jan 26 19:52 M17LDm91F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmei7KDmMNRBqn.diag
[2026-01-26 19:52:56] -rw-rw-r-- 1 boinc boinc     21657 Jan 26 19:52 stderr.txt
[2026-01-26 19:52:56] HITS file was successfully produced:
[2026-01-26 19:52:56] -rw------- 1 boinc boinc 184326234 Jan 26 19:51 shared/HITS.pool.root.1
[2026-01-26 19:52:56]  *** Contents of shared directory: ***
[2026-01-26 19:52:56] total 670340
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc 500370369 Jan 26 18:35 ATLAS.root_0
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc     15845 Jan 26 18:35 start_atlas.sh
[2026-01-26 19:52:56] -rw-r--r-- 2 boinc boinc    597758 Jan 26 18:35 input.tar.gz
[2026-01-26 19:52:56] -rw------- 1 boinc boinc 184326234 Jan 26 19:51 HITS.pool.root.1
[2026-01-26 19:52:56] -rw------- 1 boinc boinc   1105920 Jan 26 19:52 result.tar.gz
19:52:57 (875649): run_atlas exited; CPU time 24418.405785
19:52:57 (875649): called boinc_finish(0)

</stderr_txt>
]]>

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