Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:36:30 (180954): wrapper (7.7.26015): starting
09:36:30 (180954): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 09:36:30] Arguments: --nthreads 4
[2026-01-27 09:36:30] Threads: 4
[2026-01-27 09:36:30] Checking for CVMFS
[2026-01-27 09:36:30] No cvmfs_config command found, will try listing directly
[2026-01-27 09:36:30] CVMFS is ok
[2026-01-27 09:36:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 09:36:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 09:36:30] Further information can be found at the LHC@home message board.
[2026-01-27 09:36:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 09:36:30] Checking for apptainer binary...
[2026-01-27 09:36:30] which: no apptainer in ((null))
[2026-01-27 09:36:30] apptainer is not installed, using version from CVMFS
[2026-01-27 09:36:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 09:36:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-01-27 09:36:30] apptainer works
[2026-01-27 09:36:30] Set ATHENA_PROC_NUMBER=4
[2026-01-27 09:36:30] Set ATHENA_CORE_NUMBER=4
[2026-01-27 09:36:30] Starting ATLAS job with PandaID=6983014477
[2026-01-27 09:36:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 12:35:52]  *** The last 200 lines of the pilot log: ***
[2026-01-27 12:35:52] 2026-01-27 11:28:18,313 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 12:35:52] 2026-01-27 11:28:18,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 12:35:52] 2026-01-27 11:28:18,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 12:35:52] 2026-01-27 11:28:18,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 12:35:52] 2026-01-27 11:28:18,316 | INFO     | fitting pss+swap vs Time
[2026-01-27 12:35:52] 2026-01-27 11:28:18,317 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,318 | INFO     | sum of deviations: -29795752621.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,318 | INFO     | mean x: 1769508145.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,318 | INFO     | mean y: 2354888.420118343
[2026-01-27 12:35:52] 2026-01-27 11:28:18,318 | INFO     | intersect: 35229998513.64265
[2026-01-27 12:35:52] 2026-01-27 11:28:18,318 | INFO     | chi2: 2.0967330998929707
[2026-01-27 12:35:52] 2026-01-27 11:28:18,319 | INFO     | sum of square deviations: 1367709365.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | sum of deviations: -19134379685.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | mean x: 1769507992.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | mean y: 2367224.0548780486
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | intersect: 24757946626.71685
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | chi2: 1.4361303119974602
[2026-01-27 12:35:52] 2026-01-27 11:28:18,320 | INFO     | current chi2=1.4361303119974602 (change=31.506288899108405 %)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,321 | INFO     | sum of square deviations: 1246386160.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,321 | INFO     | sum of deviations: -18269395873.000008
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | mean x: 1769507840.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | mean y: 2368311.6855345913
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | intersect: 25939626175.12102
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | chi2: 1.432604867350799
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | current chi2=1.432604867350799 (change=0.24548222519987473 %)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | right removable region: 158
[2026-01-27 12:35:52] 2026-01-27 11:28:18,322 | INFO     | sum of square deviations: 1367709365.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,323 | INFO     | sum of deviations: -47075741731.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,323 | INFO     | mean x: 1769508297.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,323 | INFO     | mean y: 2374897.451219512
[2026-01-27 12:35:52] 2026-01-27 11:28:18,324 | INFO     | intersect: 60907796572.30501
[2026-01-27 12:35:52] 2026-01-27 11:28:18,324 | INFO     | chi2: 0.8740108005412557
[2026-01-27 12:35:52] 2026-01-27 11:28:18,324 | INFO     | current chi2=0.8740108005412557 (change=58.315591021772384 %)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,324 | INFO     | sum of square deviations: 1246386160.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,325 | INFO     | sum of deviations: -39353595266.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,325 | INFO     | mean x: 1769508450.0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,325 | INFO     | mean y: 2365169.06918239
[2026-01-27 12:35:52] 2026-01-27 11:28:18,325 | INFO     | intersect: 55873106995.23564
[2026-01-27 12:35:52] 2026-01-27 11:28:18,326 | INFO     | chi2: 0.8490835307575788
[2026-01-27 12:35:52] 2026-01-27 11:28:18,326 | INFO     | current chi2=0.8490835307575788 (change=2.8520551197124755 %)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,326 | INFO     | left removable region: 20
[2026-01-27 12:35:52] 2026-01-27 11:28:18,326 | INFO     | sum of square deviations: 814878534.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,327 | INFO     | sum of deviations: -14173966008.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,327 | INFO     | mean x: 1769508419.5
[2026-01-27 12:35:52] 2026-01-27 11:28:18,327 | INFO     | mean y: 2358885.731884058
[2026-01-27 12:35:52] 2026-01-27 11:28:18,327 | INFO     | intersect: 30781120539.009377
[2026-01-27 12:35:52] 2026-01-27 11:28:18,328 | INFO     | chi2: 0.07541195018933654
[2026-01-27 12:35:52] 2026-01-27 11:28:18,328 | INFO     | current memory leak: -17.39 B/s (using 138 data points, chi2=0.08)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,328 | INFO     | could have reported an average CPU frequency of 2658 MHz (9 samples)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,328 | INFO     | ..............................
[2026-01-27 12:35:52] 2026-01-27 11:28:18,328 | INFO     | . Timing measurements:
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . get job = 0 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . initial setup = 5 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . payload setup = 6 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . stage-in = 0 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . payload execution = 10276 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . stage-out = 0 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | . log creation = 0 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,329 | INFO     | ..............................
[2026-01-27 12:35:52] 2026-01-27 11:28:18,417 | INFO     | 
[2026-01-27 12:35:52] 2026-01-27 11:28:18,417 | INFO     | job summary report
[2026-01-27 12:35:52] 2026-01-27 11:28:18,417 | INFO     | --------------------------------------------------
[2026-01-27 12:35:52] 2026-01-27 11:28:18,417 | INFO     | PanDA job id: 6983014477
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | task id: 48310670
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | errors: (none)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | pilot state: finished 
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | transexitcode: 0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | exeerrorcode: 0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | exeerrordiag: 
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | exitcode: 0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | exitmsg: OK
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | cpuconsumptiontime: 39533 s
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | nevents: 400
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | neventsw: 0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,418 | INFO     | pid: 189876
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | pgrp: 189876
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | corecount: 4
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | event service: False
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | sizes: {0: 2283101, 1: 2284230, 2: 2284230, 10285: 2312797, 10286: 2312796, 10287: 2322056, 10289: 2322258}
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | --------------------------------------------------
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | 
[2026-01-27 12:35:52] 2026-01-27 11:28:18,419 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-01-27 12:35:52] 2026-01-27 11:28:18,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,440 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,440 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,440 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | job 6983014477 has completed (purged errors)
[2026-01-27 12:35:52] 2026-01-27 11:28:18,443 | INFO     | overall cleanup function is called
[2026-01-27 12:35:52] 2026-01-27 11:28:19,451 | INFO     | --- collectZombieJob: --- 10, [189876]
[2026-01-27 12:35:52] 2026-01-27 11:28:19,451 | INFO     | zombie collector waiting for pid 189876
[2026-01-27 12:35:52] 2026-01-27 11:28:19,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 12:35:52] 2026-01-27 11:28:19,452 | INFO     | collected zombie processes
[2026-01-27 12:35:52] 2026-01-27 11:28:19,452 | INFO     | will attempt to kill all subprocesses of pid=189876
[2026-01-27 12:35:52] 2026-01-27 11:28:20,333 | WARNING  | process 189876 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 12:35:52] 2026-01-27 11:28:20,528 | INFO     | process IDs to be killed: [189876] (in reverse order)
[2026-01-27 12:35:52] 2026-01-27 11:28:20,653 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 12:35:52] 2026-01-27 11:28:20,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 12:35:52] 2026-01-27 11:28:20,691 | INFO     | did not find any defunct processes belonging to 189876
[2026-01-27 12:35:52] 2026-01-27 11:28:20,728 | INFO     | did not find any defunct processes belonging to 189876
[2026-01-27 12:35:52] 2026-01-27 11:28:20,729 | INFO     | ready for new job
[2026-01-27 12:35:52] 2026-01-27 11:28:20,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 12:35:52] 2026-01-27 11:28:20,731 | INFO     | **************************************
[2026-01-27 12:35:52] 2026-01-27 11:28:20,732 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 12:35:52] 2026-01-27 11:28:20,732 | INFO     | **************************************
[2026-01-27 12:35:52] 2026-01-27 11:28:20,732 | INFO     | 
[2026-01-27 12:35:52] 2026-01-27 11:28:20,741 | INFO     | architecture information:
[2026-01-27 12:35:52] 2026-01-27 11:28:20,742 | INFO     | executing command: cat /etc/os-release
[2026-01-27 12:35:52] 2026-01-27 11:28:20,761 | INFO     | cat /etc/os-release:
[2026-01-27 12:35:52] NAME="CentOS Linux"
[2026-01-27 12:35:52] VERSION="7 (Core)"
[2026-01-27 12:35:52] ID="centos"
[2026-01-27 12:35:52] ID_LIKE="rhel fedora"
[2026-01-27 12:35:52] VERSION_ID="7"
[2026-01-27 12:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 12:35:52] ANSI_COLOR="0;31"
[2026-01-27 12:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 12:35:52] HOME_URL="https://www.centos.org/"
[2026-01-27 12:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 12:35:52] 
[2026-01-27 12:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 12:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 12:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 12:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 12:35:52] 
[2026-01-27 12:35:52] 2026-01-27 11:28:20,761 | INFO     | **************************************
[2026-01-27 12:35:52] 2026-01-27 11:28:20,856 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 12:35:52] 2026-01-27 11:28:21,201 | INFO     | number of running child processes to parent process 189876: 1
[2026-01-27 12:35:52] 2026-01-27 11:28:21,201 | INFO     | maximum number of monitored processes: 6
[2026-01-27 12:35:52] 2026-01-27 11:28:21,201 | INFO     | aborting job monitoring since job object (job id=6983014477) has expired
[2026-01-27 12:35:52] 2026-01-27 11:28:21,264 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-27 12:35:52] 2026-01-27 11:28:21,284 | INFO     | sufficient remaining disk space (658473222144 B)
[2026-01-27 12:35:52] 2026-01-27 11:28:21,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 12:35:52] 2026-01-27 11:28:21,285 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 12:35:52] 2026-01-27 11:28:21,285 | INFO     | update_server=False
[2026-01-27 12:35:52] 2026-01-27 11:28:21,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 12:35:52] 2026-01-27 11:28:21,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:35:52] 2026-01-27 11:28:21,286 | INFO     | will abort loop
[2026-01-27 12:35:52] 2026-01-27 11:28:21,684 | INFO     | all payload control threads have been joined
[2026-01-27 12:35:52] 2026-01-27 11:28:21,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 12:35:52] 2026-01-27 11:28:22,060 | INFO     | all data control threads have been joined
[2026-01-27 12:35:52] 2026-01-27 11:28:22,291 | INFO     | [job] retrieve thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,291 | INFO     | [job] job monitor thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,294 | INFO     | all job control threads have been joined
[2026-01-27 12:35:52] 2026-01-27 11:28:22,364 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,468 | INFO     | [data] copytool_in thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 12:35:52] 2026-01-27 11:28:22,689 | INFO     | [payload] control thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,846 | INFO     | [payload] validate_post thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:22,857 | INFO     | [job] validate thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,065 | INFO     | [data] control thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,178 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,299 | INFO     | [job] control thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 12:35:52] 2026-01-27 11:28:23,566 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,652 | INFO     | [payload] failed_post thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:23,885 | INFO     | [data] copytool_out thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:24,434 | INFO     | [job] queue monitor thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:26,477 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:31,795 | INFO     | job.realtimelogging is not enabled
[2026-01-27 12:35:52] 2026-01-27 11:28:32,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 12:35:52] 2026-01-27 11:28:50,866 | INFO     | PID=185088 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 12:35:52] 2026-01-27 11:28:50,867 | INFO     | .. there are 5 such processes running
[2026-01-27 12:35:52] 2026-01-27 11:28:50,867 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 12:35:52] 2026-01-27 11:28:50,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 12:35:52] 2026-01-27 11:28:50,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 12:35:52] 2026-01-27 11:29:04,429 | INFO     | [monitor] cgroup control has ended
[2026-01-27 12:35:52] 2026-01-27 11:29:04,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22401818158912)>', '<ExcThread(monitor, started 22401567151872)>']
[2026-01-27 12:35:52] 2026-01-27 11:29:05,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 12:35:52] 2026-01-27 11:29:05,942 | INFO     | [monitor] control thread has ended
[2026-01-27 12:35:52] 2026-01-27 11:29:09,982 | INFO     | all workflow threads have been joined
[2026-01-27 12:35:52] 2026-01-27 11:29:09,982 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 12:35:52] 2026-01-27 11:29:09,982 | INFO     | traces error code: 0
[2026-01-27 12:35:52] 2026-01-27 11:29:09,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 12:35:52] 2026-01-27 11:29:10,193 [wrapper] ==== pilot stdout END ====
[2026-01-27 12:35:52] 2026-01-27 11:29:10,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 12:35:52] 2026-01-27 11:29:10,200 [wrapper] pilotpid: 185088
[2026-01-27 12:35:52] 2026-01-27 11:29:10,204 [wrapper] Pilot exit status: 0
[2026-01-27 12:35:52] 2026-01-27 11:29:10,215 [wrapper] pandaids: 6983014477
[2026-01-27 12:35:52] 2026-01-27 11:29:10,295 [wrapper] cleanup supervisor_pilot  307462 185089
[2026-01-27 12:35:52] 2026-01-27 11:29:10,298 [wrapper] Test setup, not cleaning
[2026-01-27 12:35:52] 2026-01-27 11:29:10,302 [wrapper] apfmon messages muted
[2026-01-27 12:35:52] 2026-01-27 11:29:10,304 [wrapper] ==== wrapper stdout END ====
[2026-01-27 12:35:52] 2026-01-27 11:29:10,307 [wrapper] ==== wrapper stderr END ====
[2026-01-27 12:35:52]  *** Error codes and diagnostics ***
[2026-01-27 12:35:52]     "exeErrorCode": 0,
[2026-01-27 12:35:52]     "exeErrorDiag": "",
[2026-01-27 12:35:52]     "pilotErrorCode": 0,
[2026-01-27 12:35:52]     "pilotErrorDiag": "",
[2026-01-27 12:35:52]  *** Listing of results directory ***
[2026-01-27 12:35:52] total 673064
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc      5111 Jan 25 15:11 queuedata.json
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc    584422 Jan 25 15:11 pilot3.tar.gz
[2026-01-27 12:35:52] -rwx------ 1 boinc boinc     36322 Jan 25 15:11 runpilot2-wrapper.sh
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc       100 Jan 27 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 12:35:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 09:36 run_atlas
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc       105 Jan 27 09:36 job.xml
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc 503111207 Jan 27 09:36 EVNT.48310665._000091.pool.root.1
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc      6638 Jan 27 09:36 init_data.xml
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:36 start_atlas.sh
[2026-01-27 12:35:52] drwxrwx--x 2 boinc boinc      4096 Jan 27 09:36 shared
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc    597763 Jan 27 09:36 input.tar.gz
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc         0 Jan 27 09:36 boinc_lockfile
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc      2522 Jan 27 09:36 pandaJob.out
[2026-01-27 12:35:52] -rw------- 1 boinc boinc   1003573 Jan 27 09:36 agis_schedconf.cvmfs.json
[2026-01-27 12:35:52] -rw------- 1 boinc boinc   1516246 Jan 27 09:36 agis_ddmendpoints.agis.ALL.json
[2026-01-27 12:35:52] -rw------- 1 boinc boinc       452 Jan 27 09:36 workernode_map.json
[2026-01-27 12:35:52] drwx------ 5 boinc boinc      4096 Jan 27 09:36 pilot3
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc       529 Jan 27 12:27 boinc_task_state.xml
[2026-01-27 12:35:52] -rw------- 1 boinc boinc 178471842 Jan 27 12:27 HITS.48310670._010548.pool.root.1
[2026-01-27 12:35:52] -rw------- 1 boinc boinc      1031 Jan 27 12:28 memory_monitor_summary.json
[2026-01-27 12:35:52] -rw------- 1 boinc boinc    391001 Jan 27 12:28 log.48310670._010548.job.log.tgz.1
[2026-01-27 12:35:52] -rw------- 1 boinc boinc      6406 Jan 27 12:28 heartbeat.json
[2026-01-27 12:35:52] -rw------- 1 boinc boinc        95 Jan 27 12:28 pilot_heartbeat.json
[2026-01-27 12:35:52] -rw------- 1 boinc boinc      5318 Jan 27 12:29 pilotlog.txt
[2026-01-27 12:35:52] -rw------- 1 boinc boinc   1457752 Jan 27 12:29 log.48310670._010548.job.log.1
[2026-01-27 12:35:52] -rw------- 1 boinc boinc       357 Jan 27 12:29 output.list
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc       620 Jan 27 12:29 runtime_log
[2026-01-27 12:35:52] -rw------- 1 boinc boinc   1863680 Jan 27 12:29 result.tar.gz
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc      9205 Jan 27 12:29 runtime_log.err
[2026-01-27 12:35:52] -rw------- 1 boinc boinc       666 Jan 27 12:29 KMnLDmo0F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCc7KDmPIzOMo.diag
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc        26 Jan 27 12:35 wrapper_checkpoint.txt
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc      8192 Jan 27 12:35 boinc_mmap_file
[2026-01-27 12:35:52] -rw-r--r-- 1 boinc boinc     20835 Jan 27 12:35 stderr.txt
[2026-01-27 12:35:52] HITS file was successfully produced:
[2026-01-27 12:35:52] -rw------- 1 boinc boinc 178471842 Jan 27 12:27 shared/HITS.pool.root.1
[2026-01-27 12:35:52]  *** Contents of shared directory: ***
[2026-01-27 12:35:52] total 668040
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc 503111207 Jan 27 09:36 ATLAS.root_0
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:36 start_atlas.sh
[2026-01-27 12:35:52] -rw-r--r-- 2 boinc boinc    597763 Jan 27 09:36 input.tar.gz
[2026-01-27 12:35:52] -rw------- 1 boinc boinc 178471842 Jan 27 12:27 HITS.pool.root.1
[2026-01-27 12:35:52] -rw------- 1 boinc boinc   1863680 Jan 27 12:29 result.tar.gz
12:35:54 (180954): run_atlas exited; CPU time 39983.968674
12:35:54 (180954): called boinc_finish(0)

</stderr_txt>
]]>

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