Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:09 (1526261): wrapper (7.7.26015): starting
12:29:09 (1526261): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 12:29:09] Arguments: --nthreads 4
[2026-01-26 12:29:09] Threads: 4
[2026-01-26 12:29:09] Checking for CVMFS
[2026-01-26 12:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:29:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:29:10] 2.9.2.0 41542 8393 111252 155545 2 49 22596862 36864000 0 130560 0 4198133 99.988 264139 6164 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 12:29:10] CVMFS is ok
[2026-01-26 12:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 12:29:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 12:29:10] Further information can be found at the LHC@home message board.
[2026-01-26 12:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:29:10] Checking for apptainer binary...
[2026-01-26 12:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:29:10] Running /usr/bin/apptainer --version
[2026-01-26 12:29:10] apptainer version 1.4.1-1.1
[2026-01-26 12:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:29:10] thA332a
[2026-01-26 12:29:10] apptainer works
[2026-01-26 12:29:10] Set ATHENA_PROC_NUMBER=4
[2026-01-26 12:29:10] Set ATHENA_CORE_NUMBER=4
[2026-01-26 12:29:10] Starting ATLAS job with PandaID=6983062360
[2026-01-26 12:29:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:36:36]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:36:36] 2026-01-26 12:36:17,533 | INFO     | --- collectZombieJob: --- 10, [1534888]
[2026-01-26 13:36:36] 2026-01-26 12:36:17,534 | INFO     | zombie collector waiting for pid 1534888
[2026-01-26 13:36:36] 2026-01-26 12:36:17,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:36:36] 2026-01-26 12:36:17,534 | INFO     | collected zombie processes
[2026-01-26 13:36:36] 2026-01-26 12:36:17,534 | INFO     | will attempt to kill all subprocesses of pid=1534888
[2026-01-26 13:36:36] 2026-01-26 12:36:17,576 | INFO     | process IDs to be killed: [1534888] (in reverse order)
[2026-01-26 13:36:36] 2026-01-26 12:36:17,610 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:36:36] 2026-01-26 12:36:17,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:36:36] 2026-01-26 12:36:17,612 | INFO     | did not find any defunct processes belonging to 1534888
[2026-01-26 13:36:36] 2026-01-26 12:36:17,613 | INFO     | did not find any defunct processes belonging to 1534888
[2026-01-26 13:36:36] 2026-01-26 12:36:17,613 | INFO     | ready for new job
[2026-01-26 13:36:36] 2026-01-26 12:36:17,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:36:36] 2026-01-26 12:36:17,614 | INFO     | **************************************
[2026-01-26 13:36:36] 2026-01-26 12:36:17,614 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:36:36] 2026-01-26 12:36:17,614 | INFO     | **************************************
[2026-01-26 13:36:36] 2026-01-26 12:36:17,614 | INFO     | 
[2026-01-26 13:36:36] 2026-01-26 12:36:17,614 | INFO     | architecture information:
[2026-01-26 13:36:36] 2026-01-26 12:36:17,615 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:36:36] 2026-01-26 12:36:17,629 | INFO     | cat /etc/os-release:
[2026-01-26 13:36:36] NAME="CentOS Linux"
[2026-01-26 13:36:36] VERSION="7 (Core)"
[2026-01-26 13:36:36] ID="centos"
[2026-01-26 13:36:36] ID_LIKE="rhel fedora"
[2026-01-26 13:36:36] VERSION_ID="7"
[2026-01-26 13:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:36:36] ANSI_COLOR="0;31"
[2026-01-26 13:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:36:36] HOME_URL="https://www.centos.org/"
[2026-01-26 13:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:36:36] 
[2026-01-26 13:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:36:36] 
[2026-01-26 13:36:36] 2026-01-26 12:36:17,629 | INFO     | **************************************
[2026-01-26 13:36:36] 2026-01-26 12:36:18,132 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | INFO     | sufficient remaining disk space (335367110656 B)
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | INFO     | update_server=False
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:36:36] 2026-01-26 12:36:18,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:36:36] 2026-01-26 12:36:18,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:36:36] 2026-01-26 12:36:18,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:36:36] 2026-01-26 12:36:18,312 | INFO     | all data control threads have been joined
[2026-01-26 13:36:36] 2026-01-26 12:36:18,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:36:36] 2026-01-26 12:36:18,397 | INFO     | aborting loop
[2026-01-26 13:36:36] 2026-01-26 12:36:19,157 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,206 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,219 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,309 | INFO     | all payload control threads have been joined
[2026-01-26 13:36:36] 2026-01-26 12:36:19,318 | INFO     | [data] control thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,373 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,403 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,587 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:19,661 | INFO     | all job control threads have been joined
[2026-01-26 13:36:36] 2026-01-26 12:36:19,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:36:36] 2026-01-26 12:36:20,119 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:20,158 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:20,315 | INFO     | [payload] control thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:20,544 | INFO     | [job] validate thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:20,641 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:20,666 | INFO     | [job] control thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:21,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:36:36] 2026-01-26 12:36:22,021 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:23,994 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:28,831 | INFO     | job.realtimelogging is not enabled
[2026-01-26 13:36:36] 2026-01-26 12:36:28,881 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:36:36] 2026-01-26 12:36:29,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:36:36] 2026-01-26 12:36:31,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211170105152)>', '<ExcThread(monitor, started 140210381764352)>']
[2026-01-26 13:36:36] 2026-01-26 12:36:31,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:36:36] 2026-01-26 12:36:31,218 | INFO     | [monitor] control thread has ended
[2026-01-26 13:36:36] 2026-01-26 12:36:36,144 | INFO     | all workflow threads have been joined
[2026-01-26 13:36:36] 2026-01-26 12:36:36,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:36:36] 2026-01-26 12:36:36,145 | INFO     | traces error code: 0
[2026-01-26 13:36:36] 2026-01-26 12:36:36,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:36:36] 2026-01-26 12:36:36,221 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:36:36] 2026-01-26 12:36:36,225 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:36:36] 2026-01-26 12:36:36,229 [wrapper] pilotpid: 1530374
[2026-01-26 13:36:36] 2026-01-26 12:36:36,233 [wrapper] Pilot exit status: 0
[2026-01-26 13:36:36] 2026-01-26 12:36:36,246 [wrapper] pandaids: 6983062360
[2026-01-26 13:36:36] 2026-01-26 12:36:36,268 [wrapper] cleanup supervisor_pilot 1539973 1530375
[2026-01-26 13:36:36] 2026-01-26 12:36:36,272 [wrapper] Test setup, not cleaning
[2026-01-26 13:36:36] 2026-01-26 12:36:36,276 [wrapper] apfmon messages muted
[2026-01-26 13:36:36] 2026-01-26 12:36:36,280 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:36:36] 2026-01-26 12:36:36,284 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:36:36]  *** Error codes and diagnostics ***
[2026-01-26 13:36:36]     "exeErrorCode": 0,
[2026-01-26 13:36:36]     "exeErrorDiag": "",
[2026-01-26 13:36:36]     "pilotErrorCode": 0,
[2026-01-26 13:36:36]     "pilotErrorDiag": "",
[2026-01-26 13:36:36]  *** Listing of results directory ***
[2026-01-26 13:36:36] total 664180
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-26 13:36:36] -rwx------ 1 boinc boinc     36322 Jan 25 17:31 runpilot2-wrapper.sh
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc      5111 Jan 25 17:34 queuedata.json
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc       100 Jan 26 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:36:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 12:29 run_atlas
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc       105 Jan 26 12:29 job.xml
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc 493809447 Jan 26 12:29 EVNT.48310721._000206.pool.root.1
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc    597760 Jan 26 12:29 input.tar.gz
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:29 start_atlas.sh
[2026-01-26 13:36:36] drwxrwx--x 2 boinc boinc      4096 Jan 26 12:29 shared
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc         0 Jan 26 12:29 boinc_setup_complete
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc      6370 Jan 26 12:29 init_data.xml
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc         0 Jan 26 12:29 boinc_lockfile
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc      2536 Jan 26 12:29 pandaJob.out
[2026-01-26 13:36:36] -rw------- 1 boinc boinc   1002189 Jan 26 12:29 agis_schedconf.cvmfs.json
[2026-01-26 13:36:36] -rw------- 1 boinc boinc   1516246 Jan 26 12:29 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:36:36] -rw------- 1 boinc boinc       422 Jan 26 12:29 workernode_map.json
[2026-01-26 13:36:36] drwx------ 5 boinc boinc      4096 Jan 26 12:29 pilot3
[2026-01-26 13:36:36] -rw------- 1 boinc boinc        95 Jan 26 13:35 pilot_heartbeat.json
[2026-01-26 13:36:36] -rw------- 1 boinc boinc 180638563 Jan 26 13:35 HITS.48310724._010284.pool.root.1
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc       530 Jan 26 13:35 boinc_task_state.xml
[2026-01-26 13:36:36] -rw------- 1 boinc boinc      1018 Jan 26 13:36 memory_monitor_summary.json
[2026-01-26 13:36:36] -rw------- 1 boinc boinc    278076 Jan 26 13:36 log.48310724._010284.job.log.tgz.1
[2026-01-26 13:36:36] -rw------- 1 boinc boinc      6306 Jan 26 13:36 heartbeat.json
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc      8192 Jan 26 13:36 boinc_mmap_file
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc        27 Jan 26 13:36 wrapper_checkpoint.txt
[2026-01-26 13:36:36] -rw------- 1 boinc boinc      4624 Jan 26 13:36 pilotlog.txt
[2026-01-26 13:36:36] -rw------- 1 boinc boinc    597768 Jan 26 13:36 log.48310724._010284.job.log.1
[2026-01-26 13:36:36] -rw------- 1 boinc boinc       357 Jan 26 13:36 output.list
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc       620 Jan 26 13:36 runtime_log
[2026-01-26 13:36:36] -rw------- 1 boinc boinc    890880 Jan 26 13:36 result.tar.gz
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc      8901 Jan 26 13:36 runtime_log.err
[2026-01-26 13:36:36] -rw------- 1 boinc boinc       658 Jan 26 13:36 OBXLDmuCI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4z7KDmwMletn.diag
[2026-01-26 13:36:36] -rw-r--r-- 1 boinc boinc     10626 Jan 26 13:36 stderr.txt
[2026-01-26 13:36:36] HITS file was successfully produced:
[2026-01-26 13:36:36] -rw------- 1 boinc boinc 180638563 Jan 26 13:35 shared/HITS.pool.root.1
[2026-01-26 13:36:36]  *** Contents of shared directory: ***
[2026-01-26 13:36:36] total 660124
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc 493809447 Jan 26 12:29 ATLAS.root_0
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc    597760 Jan 26 12:29 input.tar.gz
[2026-01-26 13:36:36] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:29 start_atlas.sh
[2026-01-26 13:36:36] -rw------- 1 boinc boinc 180638563 Jan 26 13:35 HITS.pool.root.1
[2026-01-26 13:36:36] -rw------- 1 boinc boinc    890880 Jan 26 13:36 result.tar.gz
13:36:37 (1526261): run_atlas exited; CPU time 15071.542548
13:36:37 (1526261): called boinc_finish(0)

</stderr_txt>
]]>

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