Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:33:28 (1818345): wrapper (7.7.26015): starting
20:33:28 (1818345): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 20:33:28] Arguments: --nthreads 4
[2026-01-26 20:33:28] Threads: 4
[2026-01-26 20:33:28] Checking for CVMFS
[2026-01-26 20:33:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:33:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:33:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:33:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:33:29] 2.9.2.0 242049 8513 99196 155559 2 49 21453483 36864001 0 130560 0 4420425 99.988 276771 5285 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 20:33:29] CVMFS is ok
[2026-01-26 20:33:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:33:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:33:29] Further information can be found at the LHC@home message board.
[2026-01-26 20:33:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:33:29] Checking for apptainer binary...
[2026-01-26 20:33:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:33:29] Running /usr/bin/apptainer --version
[2026-01-26 20:33:29] apptainer version 1.4.5-1.1
[2026-01-26 20:33:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:33:29] thA350a
[2026-01-26 20:33:29] apptainer works
[2026-01-26 20:33:29] Set ATHENA_PROC_NUMBER=4
[2026-01-26 20:33:29] Set ATHENA_CORE_NUMBER=4
[2026-01-26 20:33:29] Starting ATLAS job with PandaID=6983062215
[2026-01-26 20:33:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:42:52]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:42:52]  ddmendpoint_alt=None
[2026-01-26 21:42:52]  direct_access_lan=False
[2026-01-26 21:42:52]  direct_access_wan=False
[2026-01-26 21:42:52]  domain=
[2026-01-26 21:42:52]  filesize=284887
[2026-01-26 21:42:52]  filetype=log
[2026-01-26 21:42:52]  guid=7d46f9ba-0be5-4286-8f80-4d6a85eb6f03
[2026-01-26 21:42:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 21:42:52]  is_altstaged=None
[2026-01-26 21:42:52]  is_tar=False
[2026-01-26 21:42:52]  lfn=log.48310724._010139.job.log.tgz.1
[2026-01-26 21:42:52]  mtime=0
[2026-01-26 21:42:52]  protocol_id=None
[2026-01-26 21:42:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:42:52]  replicas=None
[2026-01-26 21:42:52]  scope=mc23_13p6TeV
[2026-01-26 21:42:52]  status=None
[2026-01-26 21:42:52]  status_code=0
[2026-01-26 21:42:52]  storage_token=
[2026-01-26 21:42:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983062215/log.48310724._010139.job.log.tgz.1
[2026-01-26 21:42:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/01/log.48310724._010139.job.log.tgz.1
[2026-01-26 21:42:52]  workdir=None
[2026-01-26 21:42:52] ]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,049 | INFO     | transferring file log.48310724._010139.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983062215/log.48310724._010139.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 21:42:52] 2026-01-26 20:42:05,049 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983062215/log.48310724._010139.job.log.tgz.1 /local/data/boinc/slots/0/log.48310724._0101
[2026-01-26 21:42:52] 2026-01-26 20:42:05,068 | INFO     | adding to output.list: log.48310724._010139.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/01/log.48310724._010139.job.log.tg
[2026-01-26 21:42:52] 2026-01-26 20:42:05,068 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:42:52] 2026-01-26 20:42:05,068 | INFO     | summary of transferred files:
[2026-01-26 21:42:52] 2026-01-26 20:42:05,068 | INFO     |  -- lfn=log.48310724._010139.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:42:52] 2026-01-26 20:42:05,068 | INFO     | stage-out finished correctly
[2026-01-26 21:42:52] 2026-01-26 20:42:05,429 | INFO     | time since job start (4104s) is within the limit (349056.0s)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,732 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:42:52] 2026-01-26 20:42:05,769 | INFO     | job 6983062215 has state=finished
[2026-01-26 21:42:52] 2026-01-26 20:42:05,769 | INFO     | preparing for final server update for job 6983062215 in state='finished'
[2026-01-26 21:42:52] 2026-01-26 20:42:05,769 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983062215/jobReport.json
[2026-01-26 21:42:52] 2026-01-26 20:42:05,770 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 21:42:52] 2026-01-26 20:42:05,770 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,770 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,770 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:42:52] 2026-01-26 20:42:05,770 | INFO     | job 6983062215 has finished - writing final server update
[2026-01-26 21:42:52] 2026-01-26 20:42:05,771 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983062215/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | INFO     | extracted standard info from prmon json
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:42:52] 2026-01-26 20:42:05,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | sum of square deviations: 66959395.0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | sum of deviations: -3003640610.0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | mean x: 1769458144.5
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | mean y: 2465486.4
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | intersect: 79376186538.02312
[2026-01-26 21:42:52] 2026-01-26 20:42:05,773 | INFO     | chi2: 0.013951035920544254
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | current memory leak: -44.86 B/s (using 60 data points, chi2=0.01)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | could have reported an average CPU frequency of 3361 MHz (6 samples)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | ..............................
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . Timing measurements:
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . get job = 0 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . initial setup = 4 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . payload setup = 4 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . stage-in = 0 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . payload execution = 4085 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . stage-out = 0 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | . log creation = 0 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,774 | INFO     | ..............................
[2026-01-26 21:42:52] 2026-01-26 20:42:05,808 | INFO     | 
[2026-01-26 21:42:52] 2026-01-26 20:42:05,808 | INFO     | job summary report
[2026-01-26 21:42:52] 2026-01-26 20:42:05,808 | INFO     | --------------------------------------------------
[2026-01-26 21:42:52] 2026-01-26 20:42:05,808 | INFO     | PanDA job id: 6983062215
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | task id: 48310724
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | errors: (none)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | pilot state: finished 
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | transexitcode: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | exeerrorcode: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | exeerrordiag: 
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | exitcode: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | exitmsg: OK
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | cpuconsumptiontime: 15488 s
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | nevents: 400
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | neventsw: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | pid: 1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | pgrp: 1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | corecount: 4
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | event service: False
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | sizes: {0: 2283884, 1: 2284288, 11: 2284288, 4093: 2319274, 4094: 2319468}
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | --------------------------------------------------
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | 
[2026-01-26 21:42:52] 2026-01-26 20:42:05,809 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | job 6983062215 has completed (purged errors)
[2026-01-26 21:42:52] 2026-01-26 20:42:05,828 | INFO     | overall cleanup function is called
[2026-01-26 21:42:52] 2026-01-26 20:42:06,835 | INFO     | --- collectZombieJob: --- 10, [1826981]
[2026-01-26 21:42:52] 2026-01-26 20:42:06,836 | INFO     | zombie collector waiting for pid 1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:06,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:42:52] 2026-01-26 20:42:06,836 | INFO     | collected zombie processes
[2026-01-26 21:42:52] 2026-01-26 20:42:06,836 | INFO     | will attempt to kill all subprocesses of pid=1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:06,879 | INFO     | process IDs to be killed: [1826981] (in reverse order)
[2026-01-26 21:42:52] 2026-01-26 20:42:06,912 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:42:52] 2026-01-26 20:42:06,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:42:52] 2026-01-26 20:42:06,914 | INFO     | did not find any defunct processes belonging to 1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:06,915 | INFO     | did not find any defunct processes belonging to 1826981
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | ready for new job
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | **************************************
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | **************************************
[2026-01-26 21:42:52] 2026-01-26 20:42:06,916 | INFO     | 
[2026-01-26 21:42:52] 2026-01-26 20:42:06,917 | INFO     | architecture information:
[2026-01-26 21:42:52] 2026-01-26 20:42:06,917 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:42:52] 2026-01-26 20:42:06,931 | INFO     | cat /etc/os-release:
[2026-01-26 21:42:52] NAME="CentOS Linux"
[2026-01-26 21:42:52] VERSION="7 (Core)"
[2026-01-26 21:42:52] ID="centos"
[2026-01-26 21:42:52] ID_LIKE="rhel fedora"
[2026-01-26 21:42:52] VERSION_ID="7"
[2026-01-26 21:42:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:42:52] ANSI_COLOR="0;31"
[2026-01-26 21:42:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:42:52] HOME_URL="https://www.centos.org/"
[2026-01-26 21:42:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:42:52] 
[2026-01-26 21:42:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:42:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:42:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:42:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:42:52] 
[2026-01-26 21:42:52] 2026-01-26 20:42:06,932 | INFO     | **************************************
[2026-01-26 21:42:52] 2026-01-26 20:42:07,435 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | INFO     | sufficient remaining disk space (233725493248 B)
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | INFO     | update_server=False
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:42:52] 2026-01-26 20:42:07,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:42:52] 2026-01-26 20:42:07,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:42:52] 2026-01-26 20:42:07,934 | INFO     | all payload control threads have been joined
[2026-01-26 21:42:52] 2026-01-26 20:42:07,960 | INFO     | all data control threads have been joined
[2026-01-26 21:42:52] 2026-01-26 20:42:08,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:42:52] 2026-01-26 20:42:08,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:42:52] 2026-01-26 20:42:08,236 | INFO     | aborting loop
[2026-01-26 21:42:52] 2026-01-26 20:42:08,459 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,459 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,547 | INFO     | all job control threads have been joined
[2026-01-26 21:42:52] 2026-01-26 20:42:08,698 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,891 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,933 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,939 | INFO     | [payload] control thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:08,966 | INFO     | [data] control thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,242 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,378 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,392 | INFO     | [job] validate thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,500 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,553 | INFO     | [job] control thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,563 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:09,737 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:10,116 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:11,460 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:42:52] 2026-01-26 20:42:38,549 | INFO     | PID=1822461 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:42:52] 2026-01-26 20:42:38,549 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:42:52] 2026-01-26 20:42:38,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:42:52] 2026-01-26 20:42:38,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:42:52] 2026-01-26 20:42:46,556 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:42:52] 2026-01-26 20:42:47,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810054408000)>', '<ExcThread(monitor, started 139809557305088)>']
[2026-01-26 21:42:52] 2026-01-26 20:42:47,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:42:52] 2026-01-26 20:42:47,592 | INFO     | [monitor] control thread has ended
[2026-01-26 21:42:52] 2026-01-26 20:42:52,587 | INFO     | all workflow threads have been joined
[2026-01-26 21:42:52] 2026-01-26 20:42:52,588 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:42:52] 2026-01-26 20:42:52,588 | INFO     | traces error code: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:52,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:42:52] 2026-01-26 20:42:52,667 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:42:52] 2026-01-26 20:42:52,671 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:42:52] 2026-01-26 20:42:52,675 [wrapper] pilotpid: 1822461
[2026-01-26 21:42:52] 2026-01-26 20:42:52,679 [wrapper] Pilot exit status: 0
[2026-01-26 21:42:52] 2026-01-26 20:42:52,692 [wrapper] pandaids: 6983062215
[2026-01-26 21:42:52] 2026-01-26 20:42:52,713 [wrapper] cleanup supervisor_pilot 1832059 1822462
[2026-01-26 21:42:52] 2026-01-26 20:42:52,717 [wrapper] Test setup, not cleaning
[2026-01-26 21:42:52] 2026-01-26 20:42:52,720 [wrapper] apfmon messages muted
[2026-01-26 21:42:52] 2026-01-26 20:42:52,724 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:42:52] 2026-01-26 20:42:52,728 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:42:52]  *** Error codes and diagnostics ***
[2026-01-26 21:42:52]     "exeErrorCode": 0,
[2026-01-26 21:42:52]     "exeErrorDiag": "",
[2026-01-26 21:42:52]     "pilotErrorCode": 0,
[2026-01-26 21:42:52]     "pilotErrorDiag": "",
[2026-01-26 21:42:52]  *** Listing of results directory ***
[2026-01-26 21:42:52] total 658396
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-26 21:42:52] -rwx------ 1 boinc boinc     36322 Jan 25 17:31 runpilot2-wrapper.sh
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc      5111 Jan 25 17:35 queuedata.json
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc       100 Jan 26 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:42:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 20:33 run_atlas
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc       105 Jan 26 20:33 job.xml
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc 490622643 Jan 26 20:33 EVNT.48310721._000203.pool.root.1
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc    597766 Jan 26 20:33 input.tar.gz
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:33 start_atlas.sh
[2026-01-26 21:42:52] drwxrwx--x 2 boinc boinc      4096 Jan 26 20:33 shared
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:33 boinc_setup_complete
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc      6453 Jan 26 20:33 init_data.xml
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:33 boinc_lockfile
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc      2536 Jan 26 20:33 pandaJob.out
[2026-01-26 21:42:52] -rw------- 1 boinc boinc   1006449 Jan 26 20:33 agis_schedconf.cvmfs.json
[2026-01-26 21:42:52] -rw------- 1 boinc boinc   1516246 Jan 26 20:33 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:42:52] -rw------- 1 boinc boinc       420 Jan 26 20:33 workernode_map.json
[2026-01-26 21:42:52] drwx------ 5 boinc boinc      4096 Jan 26 20:33 pilot3
[2026-01-26 21:42:52] -rw------- 1 boinc boinc 177840600 Jan 26 21:41 HITS.48310724._010139.pool.root.1
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc       530 Jan 26 21:41 boinc_task_state.xml
[2026-01-26 21:42:52] -rw------- 1 boinc boinc        95 Jan 26 21:41 pilot_heartbeat.json
[2026-01-26 21:42:52] -rw------- 1 boinc boinc      1020 Jan 26 21:42 memory_monitor_summary.json
[2026-01-26 21:42:52] -rw------- 1 boinc boinc    284887 Jan 26 21:42 log.48310724._010139.job.log.tgz.1
[2026-01-26 21:42:52] -rw------- 1 boinc boinc      6306 Jan 26 21:42 heartbeat.json
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc        27 Jan 26 21:42 wrapper_checkpoint.txt
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:42 boinc_mmap_file
[2026-01-26 21:42:52] -rw------- 1 boinc boinc      4748 Jan 26 21:42 pilotlog.txt
[2026-01-26 21:42:52] -rw------- 1 boinc boinc    611352 Jan 26 21:42 log.48310724._010139.job.log.1
[2026-01-26 21:42:52] -rw------- 1 boinc boinc       357 Jan 26 21:42 output.list
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:42 runtime_log
[2026-01-26 21:42:52] -rw------- 1 boinc boinc    911360 Jan 26 21:42 result.tar.gz
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc      8901 Jan 26 21:42 runtime_log.err
[2026-01-26 21:42:52] -rw------- 1 boinc boinc       658 Jan 26 21:42 j53NDmkCI48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkO1KDmR4jjUn.diag
[2026-01-26 21:42:52] -rw-r--r-- 1 boinc boinc     20868 Jan 26 21:42 stderr.txt
[2026-01-26 21:42:52] HITS file was successfully produced:
[2026-01-26 21:42:52] -rw------- 1 boinc boinc 177840600 Jan 26 21:41 shared/HITS.pool.root.1
[2026-01-26 21:42:52]  *** Contents of shared directory: ***
[2026-01-26 21:42:52] total 654300
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc 490622643 Jan 26 20:33 ATLAS.root_0
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc    597766 Jan 26 20:33 input.tar.gz
[2026-01-26 21:42:52] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:33 start_atlas.sh
[2026-01-26 21:42:52] -rw------- 1 boinc boinc 177840600 Jan 26 21:41 HITS.pool.root.1
[2026-01-26 21:42:52] -rw------- 1 boinc boinc    911360 Jan 26 21:42 result.tar.gz
21:42:54 (1818345): run_atlas exited; CPU time 15506.904887
21:42:54 (1818345): called boinc_finish(0)

</stderr_txt>
]]>

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