Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:20 (19459): wrapper (7.7.26015): starting
10:38:20 (19459): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 10:38:20] Arguments: --nthreads 8
[2026-01-26 10:38:20] Threads: 8
[2026-01-26 10:38:20] Checking for CVMFS
[2026-01-26 10:38:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 10:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 10:38:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 10:38:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 10:38:23] 2.11.2.0 28804 39965 101940 155541 2 54 24682429 25165825 899 130560 0 6770185 99.819 5192162 2647 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 10:38:23] CVMFS is ok
[2026-01-26 10:38:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 10:38:23] Checking for apptainer binary...
[2026-01-26 10:38:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 10:38:23] Running /usr/bin/apptainer --version
[2026-01-26 10:38:23] apptainer version 1.3.2-1.el7
[2026-01-26 10:38:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 10:38:39] cg-vwn362.simple-grid.lan
[2026-01-26 10:38:39] apptainer works
[2026-01-26 10:38:39] Set ATHENA_PROC_NUMBER=8
[2026-01-26 10:38:39] Set ATHENA_CORE_NUMBER=8
[2026-01-26 10:38:39] Starting ATLAS job with PandaID=6983304665
[2026-01-26 10:38:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 15:14:48]  *** The last 200 lines of the pilot log: ***
[2026-01-26 15:14:48] 2026-01-26 14:13:55,147 | INFO     | job 6983304665 has finished - writing final server update
[2026-01-26 15:14:48] 2026-01-26 14:13:55,147 | INFO     | total number of processed events: 400 (read)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,149 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6983304665/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,150 | INFO     | extracted standard info from prmon json
[2026-01-26 15:14:48] 2026-01-26 14:13:55,150 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 15:14:48] 2026-01-26 14:13:55,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 15:14:48] 2026-01-26 14:13:55,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 15:14:48] 2026-01-26 14:13:55,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 15:14:48] 2026-01-26 14:13:55,156 | INFO     | fitting pss+swap vs Time
[2026-01-26 15:14:48] 2026-01-26 14:13:55,157 | INFO     | sum of square deviations: 5449944045.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,159 | INFO     | sum of deviations: 114106263097.00006
[2026-01-26 15:14:48] 2026-01-26 14:13:55,159 | INFO     | mean x: 1769428915.5
[2026-01-26 15:14:48] 2026-01-26 14:13:55,160 | INFO     | mean y: 2408752.876923077
[2026-01-26 15:14:48] 2026-01-26 14:13:55,160 | INFO     | intersect: -37044379195.10512
[2026-01-26 15:14:48] 2026-01-26 14:13:55,160 | INFO     | chi2: 8.588963925698827
[2026-01-26 15:14:48] 2026-01-26 14:13:55,161 | INFO     | sum of square deviations: 5141528960.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,166 | INFO     | sum of deviations: 146854900423.99988
[2026-01-26 15:14:48] 2026-01-26 14:13:55,166 | INFO     | mean x: 1769428763.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,167 | INFO     | mean y: 2424743.031372549
[2026-01-26 15:14:48] 2026-01-26 14:13:55,167 | INFO     | intersect: -50536877246.571014
[2026-01-26 15:14:48] 2026-01-26 14:13:55,167 | INFO     | chi2: 7.037361539700713
[2026-01-26 15:14:48] 2026-01-26 14:13:55,167 | INFO     | current chi2=7.037361539700713 (change=18.06507047206943 %)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,168 | INFO     | right removable region: 254
[2026-01-26 15:14:48] 2026-01-26 14:13:55,168 | INFO     | sum of square deviations: 5141528960.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,170 | INFO     | sum of deviations: 26285748082.999996
[2026-01-26 15:14:48] 2026-01-26 14:13:55,171 | INFO     | mean x: 1769429068.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,171 | INFO     | mean y: 2452147.156862745
[2026-01-26 15:14:48] 2026-01-26 14:13:55,171 | INFO     | intersect: -9043644275.527777
[2026-01-26 15:14:48] 2026-01-26 14:13:55,171 | INFO     | chi2: 3.902809682546403
[2026-01-26 15:14:48] 2026-01-26 14:13:55,171 | INFO     | current chi2=3.902809682546403 (change=54.56018075860231 %)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,172 | INFO     | sum of square deviations: 4844974562.5
[2026-01-26 15:14:48] 2026-01-26 14:13:55,174 | INFO     | sum of deviations: -31342411342.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,174 | INFO     | mean x: 1769429220.5
[2026-01-26 15:14:48] 2026-01-26 14:13:55,175 | INFO     | mean y: 2481681.024
[2026-01-26 15:14:48] 2026-01-26 14:13:55,175 | INFO     | intersect: 11449018242.58008
[2026-01-26 15:14:48] 2026-01-26 14:13:55,175 | INFO     | chi2: 1.8247687319308863
[2026-01-26 15:14:48] 2026-01-26 14:13:55,175 | INFO     | current chi2=1.8247687319308863 (change=53.24474211255136 %)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,176 | INFO     | sum of square deviations: 4560048290.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,178 | INFO     | sum of deviations: -35918680996.00001
[2026-01-26 15:14:48] 2026-01-26 14:13:55,178 | INFO     | mean x: 1769429373.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,178 | INFO     | mean y: 2484083.926530612
[2026-01-26 15:14:48] 2026-01-26 14:13:55,178 | INFO     | intersect: 13939961310.453732
[2026-01-26 15:14:48] 2026-01-26 14:13:55,179 | INFO     | chi2: 1.7760447881203332
[2026-01-26 15:14:48] 2026-01-26 14:13:55,179 | INFO     | current chi2=1.7760447881203332 (change=2.670143506842957 %)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,179 | INFO     | left removable region: 30
[2026-01-26 15:14:48] 2026-01-26 14:13:55,180 | INFO     | sum of square deviations: 3485088600.0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,181 | INFO     | sum of deviations: 8847378786.500002
[2026-01-26 15:14:48] 2026-01-26 14:13:55,182 | INFO     | mean x: 1769429647.5
[2026-01-26 15:14:48] 2026-01-26 14:13:55,182 | INFO     | mean y: 2496087.0758928573
[2026-01-26 15:14:48] 2026-01-26 14:13:55,182 | INFO     | intersect: -4489445474.322483
[2026-01-26 15:14:48] 2026-01-26 14:13:55,182 | INFO     | chi2: 0.0003592384819139805
[2026-01-26 15:14:48] 2026-01-26 14:13:55,182 | INFO     | current memory leak: 2.54 B/s (using 224 data points, chi2=0.00)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,183 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,183 | INFO     | ..............................
[2026-01-26 15:14:48] 2026-01-26 14:13:55,183 | INFO     | . Timing measurements:
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . get job = 0 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . initial setup = 120 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . payload setup = 157 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . stage-in = 0 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . payload execution = 15941 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . stage-out = 3 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | . log creation = 1 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,184 | INFO     | ..............................
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | 
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | job summary report
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | --------------------------------------------------
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | PanDA job id: 6983304665
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | task id: 48318042
[2026-01-26 15:14:48] 2026-01-26 14:13:55,724 | INFO     | errors: (none)
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | pilot state: finished 
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | transexitcode: 0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | exeerrorcode: 0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | exeerrordiag: 
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | exitcode: 0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | exitmsg: OK
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | cpuconsumptiontime: 59950 s
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | nevents: 400
[2026-01-26 15:14:48] 2026-01-26 14:13:55,725 | INFO     | neventsw: 0
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | pid: 27853
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | pgrp: 27853
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | corecount: 8
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | event service: False
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | sizes: {0: 2283157, 1: 2283842, 2: 2284303, 13: 2284303, 16104: 2315655, 16108: 2324653, 16109: 2324837, 16112: 2325031}
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | --------------------------------------------------
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | 
[2026-01-26 15:14:48] 2026-01-26 14:13:55,726 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-26 15:14:48] 2026-01-26 14:13:56,016 | INFO     | time since job start (16126s) is within the limit (349056.0s)
[2026-01-26 15:14:48] 2026-01-26 14:13:56,263 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | job 6983304665 has completed (purged errors)
[2026-01-26 15:14:48] 2026-01-26 14:13:56,266 | INFO     | overall cleanup function is called
[2026-01-26 15:14:48] 2026-01-26 14:13:57,276 | INFO     | --- collectZombieJob: --- 10, [27853]
[2026-01-26 15:14:48] 2026-01-26 14:13:57,276 | INFO     | zombie collector waiting for pid 27853
[2026-01-26 15:14:48] 2026-01-26 14:13:57,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 15:14:48] 2026-01-26 14:13:57,276 | INFO     | collected zombie processes
[2026-01-26 15:14:48] 2026-01-26 14:13:57,276 | INFO     | will attempt to kill all subprocesses of pid=27853
[2026-01-26 15:14:48] 2026-01-26 14:13:57,369 | INFO     | process IDs to be killed: [27853] (in reverse order)
[2026-01-26 15:14:48] 2026-01-26 14:13:57,983 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 15:14:48] 2026-01-26 14:13:57,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 15:14:48] 2026-01-26 14:13:57,985 | INFO     | did not find any defunct processes belonging to 27853
[2026-01-26 15:14:48] 2026-01-26 14:13:57,987 | INFO     | did not find any defunct processes belonging to 27853
[2026-01-26 15:14:48] 2026-01-26 14:13:57,987 | INFO     | ready for new job
[2026-01-26 15:14:48] 2026-01-26 14:13:57,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 15:14:48] 2026-01-26 14:13:57,990 | INFO     | **************************************
[2026-01-26 15:14:48] 2026-01-26 14:13:57,990 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 15:14:48] 2026-01-26 14:13:57,990 | INFO     | **************************************
[2026-01-26 15:14:48] 2026-01-26 14:13:57,990 | INFO     | 
[2026-01-26 15:14:48] 2026-01-26 14:13:57,991 | INFO     | pilot is running in a VM
[2026-01-26 15:14:48] 2026-01-26 14:13:57,991 | INFO     | architecture information:
[2026-01-26 15:14:48] 2026-01-26 14:13:57,992 | INFO     | executing command: cat /etc/os-release
[2026-01-26 15:14:48] 2026-01-26 14:13:58,808 | INFO     | cat /etc/os-release:
[2026-01-26 15:14:48] NAME="CentOS Linux"
[2026-01-26 15:14:48] VERSION="7 (Core)"
[2026-01-26 15:14:48] ID="centos"
[2026-01-26 15:14:48] ID_LIKE="rhel fedora"
[2026-01-26 15:14:48] VERSION_ID="7"
[2026-01-26 15:14:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 15:14:48] ANSI_COLOR="0;31"
[2026-01-26 15:14:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 15:14:48] HOME_URL="https://www.centos.org/"
[2026-01-26 15:14:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 15:14:48] 
[2026-01-26 15:14:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 15:14:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 15:14:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 15:14:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 15:14:48] 
[2026-01-26 15:14:48] 2026-01-26 14:13:58,809 | INFO     | **************************************
[2026-01-26 15:14:48] 2026-01-26 14:13:59,312 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-26 15:14:48] 2026-01-26 14:13:59,584 | INFO     | sufficient remaining disk space (495987982336 B)
[2026-01-26 15:14:48] 2026-01-26 14:13:59,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 15:14:48] 2026-01-26 14:13:59,585 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 15:14:48] 2026-01-26 14:13:59,585 | INFO     | update_server=False
[2026-01-26 15:14:48] 2026-01-26 14:13:59,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 15:14:48] 2026-01-26 14:13:59,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 15:14:48] 2026-01-26 14:13:59,659 | INFO     | all payload control threads have been joined
[2026-01-26 15:14:48] 2026-01-26 14:13:59,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:14:48] 2026-01-26 14:13:59,720 | INFO     | aborting loop
[2026-01-26 15:14:48] 2026-01-26 14:14:00,024 | INFO     | all data control threads have been joined
[2026-01-26 15:14:48] 2026-01-26 14:14:00,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:14:48] 2026-01-26 14:14:00,591 | INFO     | [job] retrieve thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,665 | INFO     | [payload] control thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,726 | INFO     | [job] job monitor thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,751 | INFO     | [payload] validate_post thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,887 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:00,987 | INFO     | all job control threads have been joined
[2026-01-26 15:14:48] 2026-01-26 14:14:01,030 | INFO     | [data] control thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,255 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,326 | INFO     | [job] validate thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,326 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,336 | INFO     | [job] queue monitor thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,484 | INFO     | [data] copytool_in thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,593 | INFO     | [data] copytool_out thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,870 | INFO     | [payload] failed_post thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:01,993 | INFO     | [job] control thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:02,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 15:14:48] 2026-01-26 14:14:06,446 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 15:14:48] 2026-01-26 14:14:29,169 | INFO     | PID=23427 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 15:14:48] 2026-01-26 14:14:29,169 | INFO     | .. there are 2 such processes running
[2026-01-26 15:14:48] 2026-01-26 14:14:29,169 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 15:14:48] 2026-01-26 14:14:29,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 15:14:48] 2026-01-26 14:14:29,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 15:14:48] 2026-01-26 14:14:36,851 | INFO     | [monitor] cgroup control has ended
[2026-01-26 15:14:48] 2026-01-26 14:14:38,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199243540288)>', '<ExcThread(monitor, started 140198671283968)>']
[2026-01-26 15:14:48] 2026-01-26 14:14:39,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 15:14:48] 2026-01-26 14:14:39,229 | INFO     | [monitor] control thread has ended
[2026-01-26 15:14:48] 2026-01-26 14:14:43,384 | INFO     | all workflow threads have been joined
[2026-01-26 15:14:48] 2026-01-26 14:14:43,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 15:14:48] 2026-01-26 14:14:43,384 | INFO     | traces error code: 0
[2026-01-26 15:14:48] 2026-01-26 14:14:43,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 15:14:48] 2026-01-26 14:14:43,809 [wrapper] ==== pilot stdout END ====
[2026-01-26 15:14:48] 2026-01-26 14:14:43,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 15:14:48] 2026-01-26 14:14:44,012 [wrapper] pilotpid: 23427
[2026-01-26 15:14:48] 2026-01-26 14:14:44,133 [wrapper] Pilot exit status: 0
[2026-01-26 15:14:48] 2026-01-26 14:14:44,653 [wrapper] pandaids: 6983304665
[2026-01-26 15:14:48] 2026-01-26 14:14:45,616 [wrapper] cleanup supervisor_pilot  1944 23428
[2026-01-26 15:14:48] 2026-01-26 14:14:45,698 [wrapper] Test setup, not cleaning
[2026-01-26 15:14:48] 2026-01-26 14:14:45,753 [wrapper] apfmon messages muted
[2026-01-26 15:14:48] 2026-01-26 14:14:45,883 [wrapper] ==== wrapper stdout END ====
[2026-01-26 15:14:48] 2026-01-26 14:14:45,990 [wrapper] ==== wrapper stderr END ====
[2026-01-26 15:14:48]  *** Error codes and diagnostics ***
[2026-01-26 15:14:48]     "exeErrorCode": 0,
[2026-01-26 15:14:48]     "exeErrorDiag": "",
[2026-01-26 15:14:48]     "pilotErrorCode": 0,
[2026-01-26 15:14:48]     "pilotErrorDiag": "",
[2026-01-26 15:14:48]  *** Listing of results directory ***
[2026-01-26 15:14:48] total 668872
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-26 15:14:48] -rwx------. 1 boinc boinc     36322 Jan 25 17:31 runpilot2-wrapper.sh
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc      5111 Jan 25 17:35 queuedata.json
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc       100 Jan 26 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 15:14:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 10:38 run_atlas
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc       105 Jan 26 10:38 job.xml
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc      6391 Jan 26 10:38 init_data.xml
[2026-01-26 15:14:48] -rw-r--r--. 2 boinc boinc 494599605 Jan 26 10:38 EVNT.48318040._000016.pool.root.1
[2026-01-26 15:14:48] -rw-r--r--. 2 boinc boinc     15845 Jan 26 10:38 start_atlas.sh
[2026-01-26 15:14:48] drwxrwx--x. 2 boinc boinc        68 Jan 26 10:38 shared
[2026-01-26 15:14:48] -rw-r--r--. 2 boinc boinc    597769 Jan 26 10:38 input.tar.gz
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc         0 Jan 26 10:38 boinc_lockfile
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc      2531 Jan 26 10:38 pandaJob.out
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc       415 Jan 26 10:45 workernode_map.json
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc   1004246 Jan 26 10:45 agis_schedconf.cvmfs.json
[2026-01-26 15:14:48] drwx------. 5 boinc boinc      4096 Jan 26 10:45 pilot3
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc 180804967 Jan 26 15:12 HITS.48318042._000803.pool.root.1
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc       531 Jan 26 15:12 boinc_task_state.xml
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc        95 Jan 26 15:13 pilot_heartbeat.json
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc      1011 Jan 26 15:13 memory_monitor_summary.json
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc   1516246 Jan 26 15:13 agis_ddmendpoints.agis.ALL.json
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc    527332 Jan 26 15:13 log.48318042._000803.job.log.tgz.1
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc      6322 Jan 26 15:13 heartbeat.json
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc      8192 Jan 26 15:14 boinc_mmap_file
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc        28 Jan 26 15:14 wrapper_checkpoint.txt
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc      4880 Jan 26 15:14 pilotlog.txt
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc   2269731 Jan 26 15:14 log.48318042._000803.job.log.1
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc       357 Jan 26 15:14 output.list
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc       620 Jan 26 15:14 runtime_log
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc   2816000 Jan 26 15:14 result.tar.gz
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc      8816 Jan 26 15:14 runtime_log.err
[2026-01-26 15:14:48] -rw-------. 1 boinc boinc       655 Jan 26 15:14 Qx6NDmvCI48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEQ1KDm3npiKm.diag
[2026-01-26 15:14:48] -rw-r--r--. 1 boinc boinc     20724 Jan 26 15:14 stderr.txt
[2026-01-26 15:14:49] HITS file was successfully produced:
[2026-01-26 15:14:49] -rw-------. 1 boinc boinc 180804967 Jan 26 15:12 shared/HITS.pool.root.1
[2026-01-26 15:14:49]  *** Contents of shared directory: ***
[2026-01-26 15:14:49] total 662928
[2026-01-26 15:14:49] -rw-r--r--. 2 boinc boinc 494599605 Jan 26 10:38 ATLAS.root_0
[2026-01-26 15:14:49] -rw-r--r--. 2 boinc boinc     15845 Jan 26 10:38 start_atlas.sh
[2026-01-26 15:14:49] -rw-r--r--. 2 boinc boinc    597769 Jan 26 10:38 input.tar.gz
[2026-01-26 15:14:49] -rw-------. 1 boinc boinc 180804967 Jan 26 15:12 HITS.pool.root.1
[2026-01-26 15:14:49] -rw-------. 1 boinc boinc   2816000 Jan 26 15:14 result.tar.gz
15:14:50 (19459): run_atlas exited; CPU time 60123.562857
15:14:50 (19459): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN