Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:29 (2445244): wrapper (7.7.26015): starting
00:01:29 (2445244): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 00:01:29] Arguments: --nthreads 12
[2026-01-26 00:01:29] Threads: 12
[2026-01-26 00:01:29] Checking for CVMFS
[2026-01-26 00:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 00:01:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 00:01:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 00:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 00:01:31] 2.13.3.0 9856 47580 263048 155532 1 350 32338458 40960001 20571 16776704 0 63149747 99.780 42460854 41106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 00:01:31] CVMFS is ok
[2026-01-26 00:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 00:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 00:01:31] Further information can be found at the LHC@home message board.
[2026-01-26 00:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 00:01:31] Checking for apptainer binary...
[2026-01-26 00:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 00:01:31] Running /usr/bin/apptainer --version
[2026-01-26 00:01:31] apptainer version 1.4.5-2.el9
[2026-01-26 00:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 00:01:31] c-211-33-2.aglt2.org
[2026-01-26 00:01:31] apptainer works
[2026-01-26 00:01:31] Set ATHENA_PROC_NUMBER=12
[2026-01-26 00:01:31] Set ATHENA_CORE_NUMBER=12
[2026-01-26 00:01:31] Starting ATLAS job with PandaID=6983061966
[2026-01-26 00:01:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:20 (3076047): wrapper (7.7.26015): starting
05:20:20 (3076047): wrapper: running run_atlas (--nthreads 11)
[2026-01-26 05:20:20] Arguments: --nthreads 11
[2026-01-26 05:20:20] Threads: 11
[2026-01-26 05:20:20] This job has been restarted, cleaning up previous attempt
[2026-01-26 05:20:20] Checking for CVMFS
[2026-01-26 05:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 05:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 05:20:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 05:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 05:20:21] 2.13.3.0 9856 47899 254668 155543 3 19 35231134 40960000 18287 16776704 0 63500616 99.773 43252676 40883 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 05:20:21] CVMFS is ok
[2026-01-26 05:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 05:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 05:20:21] Further information can be found at the LHC@home message board.
[2026-01-26 05:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 05:20:21] Checking for apptainer binary...
[2026-01-26 05:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 05:20:21] Running /usr/bin/apptainer --version
[2026-01-26 05:20:21] apptainer version 1.4.5-2.el9
[2026-01-26 05:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 05:20:21] c-211-33-2.aglt2.org
[2026-01-26 05:20:21] apptainer works
[2026-01-26 05:20:21] Set ATHENA_PROC_NUMBER=11
[2026-01-26 05:20:21] Set ATHENA_CORE_NUMBER=11
[2026-01-26 05:20:22] Starting ATLAS job with PandaID=6983061966
[2026-01-26 05:20:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 08:58:12]  *** The last 200 lines of the pilot log: ***
[2026-01-26 08:58:13] 2026-01-26 13:57:13,316 | INFO     | job 6983061966 has finished - writing final server update
[2026-01-26 08:58:13] 2026-01-26 13:57:13,316 | INFO     | total number of processed events: 400 (read)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,367 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983061966/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,368 | INFO     | extracted standard info from prmon json
[2026-01-26 08:58:13] 2026-01-26 13:57:13,368 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 08:58:13] 2026-01-26 13:57:13,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 08:58:13] 2026-01-26 13:57:13,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 08:58:13] 2026-01-26 13:57:13,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 08:58:13] 2026-01-26 13:57:13,387 | INFO     | fitting pss+swap vs Time
[2026-01-26 08:58:13] 2026-01-26 13:57:13,388 | INFO     | sum of square deviations: 2996527822.9107885
[2026-01-26 08:58:13] 2026-01-26 13:57:13,389 | INFO     | sum of deviations: 24632801664.600937
[2026-01-26 08:58:13] 2026-01-26 13:57:13,389 | INFO     | mean x: 1769429346.460094
[2026-01-26 08:58:13] 2026-01-26 13:57:13,389 | INFO     | mean y: 2595289.953051643
[2026-01-26 08:58:13] 2026-01-26 13:57:13,390 | INFO     | intersect: -14542906946.878199
[2026-01-26 08:58:13] 2026-01-26 13:57:13,390 | INFO     | chi2: 2.455996283670705
[2026-01-26 08:58:13] 2026-01-26 13:57:13,390 | INFO     | sum of square deviations: 2790425779.69232
[2026-01-26 08:58:13] 2026-01-26 13:57:13,400 | INFO     | sum of deviations: 38028480364.307724
[2026-01-26 08:58:13] 2026-01-26 13:57:13,400 | INFO     | mean x: 1769429193.9615386
[2026-01-26 08:58:13] 2026-01-26 13:57:13,400 | INFO     | mean y: 2605003.7884615385
[2026-01-26 08:58:13] 2026-01-26 13:57:13,400 | INFO     | intersect: -24111529781.053818
[2026-01-26 08:58:13] 2026-01-26 13:57:13,400 | INFO     | chi2: 1.758027059891845
[2026-01-26 08:58:13] 2026-01-26 13:57:13,401 | INFO     | current chi2=1.758027059891845 (change=28.4189853388411 %)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,401 | INFO     | sum of square deviations: 2593997848.472901
[2026-01-26 08:58:13] 2026-01-26 13:57:13,402 | INFO     | sum of deviations: 37082762848.47292
[2026-01-26 08:58:13] 2026-01-26 13:57:13,402 | INFO     | mean x: 1769429041.4630542
[2026-01-26 08:58:13] 2026-01-26 13:57:13,402 | INFO     | mean y: 2604269.463054187
[2026-01-26 08:58:13] 2026-01-26 13:57:13,402 | INFO     | intersect: -25292450450.957493
[2026-01-26 08:58:13] 2026-01-26 13:57:13,411 | INFO     | chi2: 1.7589918360989265
[2026-01-26 08:58:13] 2026-01-26 13:57:13,411 | INFO     | current chi2=1.7589918360989265 (change=-0.05487834795562346 %)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,411 | INFO     | right removable region: 202
[2026-01-26 08:58:13] 2026-01-26 13:57:13,412 | INFO     | sum of square deviations: 2790391741.826918
[2026-01-26 08:58:13] 2026-01-26 13:57:13,413 | INFO     | sum of deviations: -15547316118.43269
[2026-01-26 08:58:13] 2026-01-26 13:57:13,413 | INFO     | mean x: 1769429498.9711537
[2026-01-26 08:58:13] 2026-01-26 13:57:13,413 | INFO     | mean y: 2624783.4278846155
[2026-01-26 08:58:13] 2026-01-26 13:57:13,413 | INFO     | intersect: 9861412478.869278
[2026-01-26 08:58:13] 2026-01-26 13:57:13,413 | INFO     | chi2: 0.8148257446810003
[2026-01-26 08:58:13] 2026-01-26 13:57:13,414 | INFO     | current chi2=0.8148257446810003 (change=66.82300579611746 %)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,414 | INFO     | sum of square deviations: 2593992964.394097
[2026-01-26 08:58:13] 2026-01-26 13:57:13,423 | INFO     | sum of deviations: -23849777648.61084
[2026-01-26 08:58:13] 2026-01-26 13:57:13,423 | INFO     | mean x: 1769429651.458128
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | mean y: 2631180.339901478
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | intersect: 16271180991.920631
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | chi2: 0.735529422963636
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | current chi2=0.735529422963636 (change=9.731690761490164 %)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | left removable region: 20
[2026-01-26 08:58:13] 2026-01-26 13:57:13,424 | INFO     | sum of square deviations: 1869419800.3351676
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | sum of deviations: -8400654291.098905
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | mean x: 1769429620.9395604
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | mean y: 2641283.263736264
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | intersect: 7953967430.166856
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | chi2: 0.017786011514027016
[2026-01-26 08:58:13] 2026-01-26 13:57:13,426 | INFO     | current memory leak: -4.49 B/s (using 182 data points, chi2=0.02)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,435 | INFO     | could have reported an average CPU frequency of 2686 MHz (11 samples)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,435 | INFO     | ..............................
[2026-01-26 08:58:13] 2026-01-26 13:57:13,435 | INFO     | . Timing measurements:
[2026-01-26 08:58:13] 2026-01-26 13:57:13,435 | INFO     | . get job = 0 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,435 | INFO     | . initial setup = 2 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | . payload setup = 14 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | . stage-in = 0 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | . payload execution = 12952 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | . stage-out = 4 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | . log creation = 0 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,436 | INFO     | ..............................
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | 
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | job summary report
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | --------------------------------------------------
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | PanDA job id: 6983061966
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | task id: 48310724
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | errors: (none)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | pilot state: finished 
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | transexitcode: 0
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | exeerrorcode: 0
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | exeerrordiag: 
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | exitcode: 0
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | exitmsg: OK
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | cpuconsumptiontime: 38707 s
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | nevents: 400
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | neventsw: 0
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | pid: 3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | pgrp: 3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | corecount: 11
[2026-01-26 08:58:13] 2026-01-26 13:57:13,721 | INFO     | event service: False
[2026-01-26 08:58:13] 2026-01-26 13:57:13,722 | INFO     | sizes: {0: 2283764, 1: 2283848, 2: 2284309, 13: 2284309, 12971: 2314548, 12976: 2323546, 12978: 2323924}
[2026-01-26 08:58:13] 2026-01-26 13:57:13,722 | INFO     | --------------------------------------------------
[2026-01-26 08:58:13] 2026-01-26 13:57:13,722 | INFO     | 
[2026-01-26 08:58:13] 2026-01-26 13:57:13,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 08:58:13] 2026-01-26 13:57:13,774 | INFO     | time since job start (12991s) is within the limit (349056.0s)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,839 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,847 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,847 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 08:58:13] 2026-01-26 13:57:13,847 | INFO     | job 6983061966 has completed (purged errors)
[2026-01-26 08:58:13] 2026-01-26 13:57:13,847 | INFO     | overall cleanup function is called
[2026-01-26 08:58:13] 2026-01-26 13:57:14,859 | INFO     | --- collectZombieJob: --- 10, [3109428]
[2026-01-26 08:58:13] 2026-01-26 13:57:14,860 | INFO     | zombie collector waiting for pid 3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:14,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 08:58:13] 2026-01-26 13:57:14,860 | INFO     | collected zombie processes
[2026-01-26 08:58:13] 2026-01-26 13:57:14,860 | INFO     | will attempt to kill all subprocesses of pid=3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:15,669 | INFO     | process IDs to be killed: [3109428] (in reverse order)
[2026-01-26 08:58:13] 2026-01-26 13:57:15,895 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 08:58:13] 2026-01-26 13:57:15,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 08:58:13] 2026-01-26 13:57:15,920 | INFO     | did not find any defunct processes belonging to 3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:15,945 | INFO     | did not find any defunct processes belonging to 3109428
[2026-01-26 08:58:13] 2026-01-26 13:57:15,945 | INFO     | ready for new job
[2026-01-26 08:58:13] 2026-01-26 13:57:15,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 08:58:13] 2026-01-26 13:57:15,947 | INFO     | **************************************
[2026-01-26 08:58:13] 2026-01-26 13:57:15,948 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 08:58:13] 2026-01-26 13:57:15,948 | INFO     | **************************************
[2026-01-26 08:58:13] 2026-01-26 13:57:15,948 | INFO     | 
[2026-01-26 08:58:13] 2026-01-26 13:57:15,958 | INFO     | architecture information:
[2026-01-26 08:58:13] 2026-01-26 13:57:15,963 | INFO     | executing command: cat /etc/os-release
[2026-01-26 08:58:13] 2026-01-26 13:57:16,027 | INFO     | cat /etc/os-release:
[2026-01-26 08:58:13] NAME="CentOS Linux"
[2026-01-26 08:58:13] VERSION="7 (Core)"
[2026-01-26 08:58:13] ID="centos"
[2026-01-26 08:58:13] ID_LIKE="rhel fedora"
[2026-01-26 08:58:13] VERSION_ID="7"
[2026-01-26 08:58:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 08:58:13] ANSI_COLOR="0;31"
[2026-01-26 08:58:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 08:58:13] HOME_URL="https://www.centos.org/"
[2026-01-26 08:58:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 08:58:13] 
[2026-01-26 08:58:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 08:58:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 08:58:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 08:58:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 08:58:13] 
[2026-01-26 08:58:13] 2026-01-26 13:57:16,027 | INFO     | **************************************
[2026-01-26 08:58:13] 2026-01-26 13:57:16,531 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 08:58:13] 2026-01-26 13:57:16,595 | INFO     | sufficient remaining disk space (124762718208 B)
[2026-01-26 08:58:13] 2026-01-26 13:57:16,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 08:58:13] 2026-01-26 13:57:16,595 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 08:58:13] 2026-01-26 13:57:16,595 | INFO     | update_server=False
[2026-01-26 08:58:13] 2026-01-26 13:57:16,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 08:58:13] 2026-01-26 13:57:16,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:58:13] 2026-01-26 13:57:16,597 | INFO     | aborting loop
[2026-01-26 08:58:13] 2026-01-26 13:57:17,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 08:58:13] 2026-01-26 13:57:17,361 | INFO     | all job control threads have been joined
[2026-01-26 08:58:13] 2026-01-26 13:57:17,520 | INFO     | all payload control threads have been joined
[2026-01-26 08:58:13] 2026-01-26 13:57:17,603 | INFO     | [job] retrieve thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:17,604 | INFO     | [job] job monitor thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:17,624 | INFO     | all data control threads have been joined
[2026-01-26 08:58:13] 2026-01-26 13:57:17,630 | INFO     | [payload] validate_post thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,099 | INFO     | [data] copytool_in thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,099 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,373 | INFO     | [job] control thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,394 | INFO     | [job] validate thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,397 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,402 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,486 | INFO     | [payload] failed_post thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,527 | INFO     | [payload] control thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,629 | INFO     | [data] control thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:18,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:58:13] 2026-01-26 13:57:19,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 08:58:13] 2026-01-26 13:57:19,358 | INFO     | [data] copytool_out thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:19,741 | INFO     | [job] queue monitor thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:23,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:27,082 | INFO     | job.realtimelogging is not enabled
[2026-01-26 08:58:13] 2026-01-26 13:57:28,088 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 08:58:13] 2026-01-26 13:57:48,987 | INFO     | PID=3090207 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 08:58:13] 2026-01-26 13:57:48,987 | INFO     | .. there are 17 such processes running
[2026-01-26 08:58:13] 2026-01-26 13:57:48,988 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 08:58:13] 2026-01-26 13:57:48,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 08:58:13] 2026-01-26 13:57:48,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 08:58:13] 2026-01-26 13:58:05,898 | INFO     | [monitor] cgroup control has ended
[2026-01-26 08:58:13] 2026-01-26 13:58:05,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596408661824)>', '<ExcThread(monitor, started 140595863471872)>']
[2026-01-26 08:58:13] 2026-01-26 13:58:06,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 08:58:13] 2026-01-26 13:58:06,127 | INFO     | [monitor] control thread has ended
[2026-01-26 08:58:13] 2026-01-26 13:58:10,979 | INFO     | all workflow threads have been joined
[2026-01-26 08:58:13] 2026-01-26 13:58:10,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 08:58:13] 2026-01-26 13:58:10,979 | INFO     | traces error code: 0
[2026-01-26 08:58:13] 2026-01-26 13:58:10,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 08:58:13] 2026-01-26 13:58:12,035 [wrapper] ==== pilot stdout END ====
[2026-01-26 08:58:13] 2026-01-26 13:58:12,050 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 08:58:13] 2026-01-26 13:58:12,065 [wrapper] pilotpid: 3090207
[2026-01-26 08:58:13] 2026-01-26 13:58:12,083 [wrapper] Pilot exit status: 0
[2026-01-26 08:58:13] 2026-01-26 13:58:12,211 [wrapper] pandaids: 6983061966 6983061966
[2026-01-26 08:58:13] 2026-01-26 13:58:12,429 [wrapper] cleanup supervisor_pilot 3492282 3090208
[2026-01-26 08:58:13] 2026-01-26 13:58:12,433 [wrapper] Test setup, not cleaning
[2026-01-26 08:58:13] 2026-01-26 13:58:12,436 [wrapper] apfmon messages muted
[2026-01-26 08:58:13] 2026-01-26 13:58:12,439 [wrapper] ==== wrapper stdout END ====
[2026-01-26 08:58:13] 2026-01-26 13:58:12,441 [wrapper] ==== wrapper stderr END ====
[2026-01-26 08:58:13]  *** Error codes and diagnostics ***
[2026-01-26 08:58:13]     "exeErrorCode": 0,
[2026-01-26 08:58:13]     "exeErrorDiag": "",
[2026-01-26 08:58:13]     "pilotErrorCode": 0,
[2026-01-26 08:58:13]     "pilotErrorDiag": "",
[2026-01-26 08:58:13]  *** Listing of results directory ***
[2026-01-26 08:58:13] total 1153988
[2026-01-26 08:58:13] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 08:58:13] -rwx------. 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas       100 Jan 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 08:58:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 00:01 run_atlas
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas       105 Jan 26 00:01 job.xml
[2026-01-26 08:58:13] -rw-r--r--. 3 boincer umatlas 496723875 Jan 26 00:01 EVNT.48310721._000199.pool.root.1
[2026-01-26 08:58:13] -rw-r--r--. 3 boincer umatlas 496723875 Jan 26 00:01 ATLAS.root_0
[2026-01-26 08:58:13] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:01 start_atlas.sh
[2026-01-26 08:58:13] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 00:01 shared
[2026-01-26 08:58:13] -rw-r--r--. 2 boincer umatlas    597760 Jan 26 00:01 input.tar.gz
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas         0 Jan 26 00:01 boinc_lockfile
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas      2534 Jan 26 05:20 pandaJob.out
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas        57 Jan 26 05:20 setup.sh.local
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas   1004246 Jan 26 05:20 agis_schedconf.cvmfs.json
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas       444 Jan 26 05:20 workernode_map.json
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas 179873431 Jan 26 08:56 HITS.48310724._009938.pool.root.1
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas       532 Jan 26 08:56 boinc_task_state.xml
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas      1052 Jan 26 08:57 memory_monitor_summary.json
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas   1516246 Jan 26 08:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas    511173 Jan 26 08:57 log.48310724._009938.job.log.tgz.1
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas      6422 Jan 26 08:57 heartbeat.json
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas      6860 Jan 26 08:57 init_data.xml
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas        95 Jan 26 08:57 pilot_heartbeat.json
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 08:57 boinc_mmap_file
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas        28 Jan 26 08:57 wrapper_checkpoint.txt
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas      4893 Jan 26 08:58 pilotlog.txt
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas   1692231 Jan 26 08:58 log.48310724._009938.job.log.1
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas       357 Jan 26 08:58 output.list
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas       620 Jan 26 08:58 runtime_log
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas   2222080 Jan 26 08:58 result.tar.gz
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas      9439 Jan 26 08:58 runtime_log.err
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas       786 Jan 26 08:58 b8NODmk9H48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrr7KDmOt0gVn.diag
[2026-01-26 08:58:13] -rw-r--r--. 1 boincer umatlas     23301 Jan 26 08:58 stderr.txt
[2026-01-26 08:58:13] HITS file was successfully produced:
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas 179873431 Jan 26 08:56 shared/HITS.pool.root.1
[2026-01-26 08:58:13]  *** Contents of shared directory: ***
[2026-01-26 08:58:13] total 663524
[2026-01-26 08:58:13] -rw-r--r--. 3 boincer umatlas 496723875 Jan 26 00:01 ATLAS.root_0
[2026-01-26 08:58:13] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 00:01 start_atlas.sh
[2026-01-26 08:58:13] -rw-r--r--. 2 boincer umatlas    597760 Jan 26 00:01 input.tar.gz
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas 179873431 Jan 26 08:56 HITS.pool.root.1
[2026-01-26 08:58:13] -rw-------. 1 boincer umatlas   2222080 Jan 26 08:58 result.tar.gz
08:58:14 (3076047): run_atlas exited; CPU time 39106.373967
08:58:14 (3076047): called boinc_finish(0)

</stderr_txt>
]]>

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