Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:03 (727395): wrapper (7.7.26015): starting
11:51:03 (727395): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 11:51:03] Arguments: --nthreads 4
[2026-01-26 11:51:03] Threads: 4
[2026-01-26 11:51:03] Checking for CVMFS
[2026-01-26 11:51:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:51:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:51:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:51:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:51:04] 2.9.2.0 3269150 8297 102312 155543 3 50 34243670 36864000 0 130560 0 4797115 99.990 259768 5651 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 11:51:04] CVMFS is ok
[2026-01-26 11:51:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:51:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:51:04] Further information can be found at the LHC@home message board.
[2026-01-26 11:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:51:04] Checking for apptainer binary...
[2026-01-26 11:51:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:51:04] Running /usr/bin/apptainer --version
[2026-01-26 11:51:04] apptainer version 1.4.1-1.1
[2026-01-26 11:51:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:51:04] thA315b
[2026-01-26 11:51:04] apptainer works
[2026-01-26 11:51:04] Set ATHENA_PROC_NUMBER=4
[2026-01-26 11:51:04] Set ATHENA_CORE_NUMBER=4
[2026-01-26 11:51:04] Starting ATLAS job with PandaID=6983344467
[2026-01-26 11:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:55:42]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:55:42] 2026-01-26 11:55:12,290 | INFO     | did not find any defunct processes belonging to 736001
[2026-01-26 12:55:42] 2026-01-26 11:55:12,291 | INFO     | did not find any defunct processes belonging to 736001
[2026-01-26 12:55:42] 2026-01-26 11:55:12,291 | INFO     | ready for new job
[2026-01-26 12:55:42] 2026-01-26 11:55:12,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:55:42] 2026-01-26 11:55:12,292 | INFO     | **************************************
[2026-01-26 12:55:42] 2026-01-26 11:55:12,292 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:55:42] 2026-01-26 11:55:12,292 | INFO     | **************************************
[2026-01-26 12:55:42] 2026-01-26 11:55:12,292 | INFO     | 
[2026-01-26 12:55:42] 2026-01-26 11:55:12,292 | INFO     | architecture information:
[2026-01-26 12:55:42] 2026-01-26 11:55:12,293 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:55:42] 2026-01-26 11:55:12,302 | INFO     | cat /etc/os-release:
[2026-01-26 12:55:42] NAME="CentOS Linux"
[2026-01-26 12:55:42] VERSION="7 (Core)"
[2026-01-26 12:55:42] ID="centos"
[2026-01-26 12:55:42] ID_LIKE="rhel fedora"
[2026-01-26 12:55:42] VERSION_ID="7"
[2026-01-26 12:55:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:55:42] ANSI_COLOR="0;31"
[2026-01-26 12:55:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:55:42] HOME_URL="https://www.centos.org/"
[2026-01-26 12:55:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:55:42] 
[2026-01-26 12:55:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:55:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:55:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:55:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:55:42] 
[2026-01-26 12:55:42] 2026-01-26 11:55:12,302 | INFO     | **************************************
[2026-01-26 12:55:42] 2026-01-26 11:55:12,806 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 12:55:42] 2026-01-26 11:55:12,819 | INFO     | sufficient remaining disk space (322993913856 B)
[2026-01-26 12:55:42] 2026-01-26 11:55:12,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:55:42] 2026-01-26 11:55:12,819 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:55:42] 2026-01-26 11:55:12,819 | INFO     | update_server=False
[2026-01-26 12:55:42] 2026-01-26 11:55:12,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:55:42] 2026-01-26 11:55:12,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:55:42] 2026-01-26 11:55:13,073 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 12:55:42] 2026-01-26 11:55:13,073 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 12:55:42] 2026-01-26 11:55:13,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:55:42] 2026-01-26 11:55:13,073 | INFO     | will abort loop
[2026-01-26 12:55:42] 2026-01-26 11:55:13,106 | INFO     | all payload control threads have been joined
[2026-01-26 12:55:42] 2026-01-26 11:55:13,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:55:42] 2026-01-26 11:55:13,615 | INFO     | all job control threads have been joined
[2026-01-26 12:55:42] 2026-01-26 11:55:13,806 | INFO     | all data control threads have been joined
[2026-01-26 12:55:42] 2026-01-26 11:55:13,825 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:13,825 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:13,881 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:13,945 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:13,982 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,077 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,112 | INFO     | [payload] control thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,621 | INFO     | [job] control thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,762 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,812 | INFO     | [data] control thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:14,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:55:42] 2026-01-26 11:55:15,017 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:15,244 | INFO     | [job] validate thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:15,307 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:15,432 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:18,996 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:55:42] 2026-01-26 11:55:19,525 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:55:42] 2026-01-26 11:55:20,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997390018368)>', '<ExcThread(monitor, started 139996522600192)>']
[2026-01-26 12:55:42] 2026-01-26 11:55:25,991 | INFO     | all workflow threads have been joined
[2026-01-26 12:55:42] 2026-01-26 11:55:25,991 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:55:42] 2026-01-26 11:55:25,991 | INFO     | traces error code: 0
[2026-01-26 12:55:42] 2026-01-26 11:55:25,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | INFO     | PID=731497 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:55:42] 2026-01-26 11:55:42,782 | INFO     | [monitor] control thread has ended
[2026-01-26 12:55:42] 2026-01-26 11:55:42,834 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:55:42] 2026-01-26 11:55:42,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:55:42] 2026-01-26 11:55:42,839 [wrapper] pilotpid: 731497
[2026-01-26 12:55:42] 2026-01-26 11:55:42,842 [wrapper] Pilot exit status: 0
[2026-01-26 12:55:42] 2026-01-26 11:55:42,850 [wrapper] pandaids: 6983344467
[2026-01-26 12:55:42] 2026-01-26 11:55:42,868 [wrapper] cleanup supervisor_pilot  742201 731498
[2026-01-26 12:55:42] 2026-01-26 11:55:42,871 [wrapper] Test setup, not cleaning
[2026-01-26 12:55:42] 2026-01-26 11:55:42,873 [wrapper] apfmon messages muted
[2026-01-26 12:55:42] 2026-01-26 11:55:42,876 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:55:42] 2026-01-26 11:55:42,878 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:55:42]  *** Error codes and diagnostics ***
[2026-01-26 12:55:42]     "exeErrorCode": 0,
[2026-01-26 12:55:42]     "exeErrorDiag": "",
[2026-01-26 12:55:42]     "pilotErrorCode": 0,
[2026-01-26 12:55:42]     "pilotErrorDiag": "",
[2026-01-26 12:55:42]  *** Listing of results directory ***
[2026-01-26 12:55:42] total 671892
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-26 12:55:42] -rwx------ 1 boinc boinc     36322 Jan 25 21:51 runpilot2-wrapper.sh
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      5111 Jan 25 21:54 queuedata.json
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc       100 Jan 26 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:55:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 11:51 run_atlas
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc       105 Jan 26 11:51 job.xml
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc 498141026 Jan 26 11:51 EVNT.48317869._000015.pool.root.1
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc    597747 Jan 26 11:51 input.tar.gz
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:51 start_atlas.sh
[2026-01-26 12:55:42] drwxrwx--x 2 boinc boinc      4096 Jan 26 11:51 shared
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:51 boinc_setup_complete
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      6443 Jan 26 11:51 init_data.xml
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:51 boinc_lockfile
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      2512 Jan 26 11:51 pandaJob.out
[2026-01-26 12:55:42] -rw------- 1 boinc boinc   1004246 Jan 26 11:51 agis_schedconf.cvmfs.json
[2026-01-26 12:55:42] -rw------- 1 boinc boinc   1516246 Jan 26 11:51 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:55:42] -rw------- 1 boinc boinc       418 Jan 26 11:51 workernode_map.json
[2026-01-26 12:55:42] drwx------ 5 boinc boinc      4096 Jan 26 11:51 pilot3
[2026-01-26 12:55:42] -rw------- 1 boinc boinc 184228484 Jan 26 12:54 HITS.48317872._000749.pool.root.1
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc       530 Jan 26 12:54 boinc_task_state.xml
[2026-01-26 12:55:42] -rw------- 1 boinc boinc      1013 Jan 26 12:55 memory_monitor_summary.json
[2026-01-26 12:55:42] -rw------- 1 boinc boinc    285088 Jan 26 12:55 log.48317872._000749.job.log.tgz.1
[2026-01-26 12:55:42] -rw------- 1 boinc boinc      6286 Jan 26 12:55 heartbeat.json
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      8192 Jan 26 12:55 boinc_mmap_file
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc        27 Jan 26 12:55 wrapper_checkpoint.txt
[2026-01-26 12:55:42] -rw------- 1 boinc boinc       746 Jan 26 12:55 pilotlog.txt
[2026-01-26 12:55:42] -rw------- 1 boinc boinc        95 Jan 26 12:55 pilot_heartbeat.json
[2026-01-26 12:55:42] -rw------- 1 boinc boinc    573833 Jan 26 12:55 log.48317872._000749.job.log.1
[2026-01-26 12:55:42] -rw------- 1 boinc boinc       357 Jan 26 12:55 output.list
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc       620 Jan 26 12:55 runtime_log
[2026-01-26 12:55:42] -rw------- 1 boinc boinc    880640 Jan 26 12:55 result.tar.gz
[2026-01-26 12:55:42] -rw------- 1 boinc boinc       658 Jan 26 12:55 zaiNDmQGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSp1KDmQyKX9n.diag
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      8901 Jan 26 12:55 runtime_log.err
[2026-01-26 12:55:42] -rw-r--r-- 1 boinc boinc      9978 Jan 26 12:55 stderr.txt
[2026-01-26 12:55:42] HITS file was successfully produced:
[2026-01-26 12:55:42] -rw------- 1 boinc boinc 184228484 Jan 26 12:54 shared/HITS.pool.root.1
[2026-01-26 12:55:42]  *** Contents of shared directory: ***
[2026-01-26 12:55:42] total 667848
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc 498141026 Jan 26 11:51 ATLAS.root_0
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc    597747 Jan 26 11:51 input.tar.gz
[2026-01-26 12:55:42] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:51 start_atlas.sh
[2026-01-26 12:55:42] -rw------- 1 boinc boinc 184228484 Jan 26 12:54 HITS.pool.root.1
[2026-01-26 12:55:42] -rw------- 1 boinc boinc    880640 Jan 26 12:55 result.tar.gz
12:55:44 (727395): run_atlas exited; CPU time 14420.682452
12:55:44 (727395): called boinc_finish(0)

</stderr_txt>
]]>

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